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The map label for this gene is 229587049

Identifier: 229587049

GI number: 229587049

Start: 994541

End: 994858

Strand: Direct

Name: 229587049

Synonym: RAF_ORF0965

Alternate gene names: NA

Gene position: 994541-994858 (Clockwise)

Preceding gene: 229587048

Following gene: 229587050

Centisome position: 77.79

GC content: 27.67

Gene sequence:

>318_bases
ATGGTTAAAGACAATATACCTTATGCCCTAATAATAGAAGATGATGCTATACTAAATGACGATTTCCGTAATAAATTTTT
AACAATACTTAAGCATTTACCTACCGACTGGGATTTAATTTATTTGTCCTTGTCACATTCTAAAAACAAAATATTTTATA
ATATTTACAATAATCCGTATTTAAAGAAGATAGGTCATGGTGGTTACTTTAATACAACTACAGGTTATTTGATACACTTA
AAAGCTGCTCAAAAACTTCTTGAATATAGCAAAAACTTTACTTTAGAGATTGATAATGTACCAAGCTTTTATGCATAG

Upstream 100 bases:

>100_bases
GGAAAATATAAATTATTATTCCGATAGCAAAATATTAAATCATACTTTAACGGCAGGTGAACTCGGTTGTTATTGTAACC
ATAGAGAAATTTGGCTTAAA

Downstream 100 bases:

>100_bases
CGAAGTGCAGTCCTATGTCACCTCACCTTTTTTAATATATGCAACACTTAATTCTGAAGATTCAATTATATTTGAAATGG
GAAGAGCACATTAAATAACG

Product: LPS biosynthesis glycosyltransferase

Products: NA

Alternate protein names: LPS Biosynthesis Glycosyltransferase

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MVKDNIPYALIIEDDAILNDDFRNKFLTILKHLPTDWDLIYLSLSHSKNKIFYNIYNNPYLKKIGHGGYFNTTTGYLIHL
KAAQKLLEYSKNFTLEIDNVPSFYA

Sequences:

>Translated_105_residues
MVKDNIPYALIIEDDAILNDDFRNKFLTILKHLPTDWDLIYLSLSHSKNKIFYNIYNNPYLKKIGHGGYFNTTTGYLIHL
KAAQKLLEYSKNFTLEIDNVPSFYA
>Mature_105_residues
MVKDNIPYALIIEDDAILNDDFRNKFLTILKHLPTDWDLIYLSLSHSKNKIFYNIYNNPYLKKIGHGGYFNTTTGYLIHL
KAAQKLLEYSKNFTLEIDNVPSFYA

Specific function: Unknown

COG id: COG3306

COG function: function code M; Glycosyltransferase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12292; Mature: 12292

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKDNIPYALIIEDDAILNDDFRNKFLTILKHLPTDWDLIYLSLSHSKNKIFYNIYNNPY
CCCCCCCEEEEEECCCEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCE
LKKIGHGGYFNTTTGYLIHLKAAQKLLEYSKNFTLEIDNVPSFYA
EEECCCCCCCCCCCCEEEEEHHHHHHHHCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MVKDNIPYALIIEDDAILNDDFRNKFLTILKHLPTDWDLIYLSLSHSKNKIFYNIYNNPY
CCCCCCCEEEEEECCCEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCE
LKKIGHGGYFNTTTGYLIHLKAAQKLLEYSKNFTLEIDNVPSFYA
EEECCCCCCCCCCCCEEEEEHHHHHHHHCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA