| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227826640
Identifier: 227826640
GI number: 227826640
Start: 198820
End: 199599
Strand: Direct
Name: 227826640
Synonym: M1425_0231
Alternate gene names: NA
Gene position: 198820-199599 (Clockwise)
Preceding gene: 227826639
Following gene: 227826641
Centisome position: 7.62
GC content: 36.28
Gene sequence:
>780_bases TTGATAAAAAGGTTGCAAAACCAGCAAGATATATGGAAAAGGATTGAAATAGTAGGAGATATAGTAATTATTGGGATCCC TTTTAACAAAAGATCAGAAGATCTTATAGAGATAGCAAATGAGATACTTTTAACTTTTCCCTATATTAAATCAGTGTGGG GAAGATACAGGGACGTCTCTGGCACATATAGGTTATCAACGTATGTATATTTAGCCGGAGAGAAAAGAAGTGAGACCATT TATAAAGAGCATAAATGCAGATATTTTCTTGATTTTACTAAGGTATTCTTTTCTGAGAAGCTATCCTATGAACATCTGAG AGTAGCAAGACAAGTTAAGAGAGGTGAGATTATCATAAACATGTTCGCTGGTTTTGGCCCATTTTCAATCCTCTCCGCAG TTCTTGGCAAACCAAAAGTAATTTACTCAATAGATGCAAATCCCTATGCGTATTATTATATGATGGTAAACGTAGAATTA AATAGGGCTTACGAAGTGCTTCCAATGTATGGAGATGCTTTCAAAAGAGTATACGATCTAGAAGATGCAGATAGAATAAT TGCACCTCTGCCAGAACTAGCGGATAAGGCATATGAGGTAGCGTTGCAAAAGGTAAAAAAAGGTGGTACAATTCACCTTT ATACTGAGGTGGAGACGAATAGGGGTGAGGACCCCGTAGGAATTGCTATGAATAAGTATAAGGGATCTTATTTTGGTAGG ATAGTGAGGAGTGTTAATCCACATAAGTATCATGTGGTAGTTGATATTAAGGTTACTTAG
Upstream 100 bases:
>100_bases GAGACAGTACTAGTGGGTGGAGAGGCAGTATTAGATGGTGGTGTTCCTTTAAATATTGGAATAAAACATATTGAGAAAGC CATAGAGAGGCTTGAAGGCA
Downstream 100 bases:
>100_bases TGGGAATAATTTACTAACGAGTCCATAAATCTGTTAACCAGTGCTATTTGGGTTATCCGGCTAATGGGTGGAGAAAAATT GACAAGCCAATTCTACGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MIKRLQNQQDIWKRIEIVGDIVIIGIPFNKRSEDLIEIANEILLTFPYIKSVWGRYRDVSGTYRLSTYVYLAGEKRSETI YKEHKCRYFLDFTKVFFSEKLSYEHLRVARQVKRGEIIINMFAGFGPFSILSAVLGKPKVIYSIDANPYAYYYMMVNVEL NRAYEVLPMYGDAFKRVYDLEDADRIIAPLPELADKAYEVALQKVKKGGTIHLYTEVETNRGEDPVGIAMNKYKGSYFGR IVRSVNPHKYHVVVDIKVT
Sequences:
>Translated_259_residues MIKRLQNQQDIWKRIEIVGDIVIIGIPFNKRSEDLIEIANEILLTFPYIKSVWGRYRDVSGTYRLSTYVYLAGEKRSETI YKEHKCRYFLDFTKVFFSEKLSYEHLRVARQVKRGEIIINMFAGFGPFSILSAVLGKPKVIYSIDANPYAYYYMMVNVEL NRAYEVLPMYGDAFKRVYDLEDADRIIAPLPELADKAYEVALQKVKKGGTIHLYTEVETNRGEDPVGIAMNKYKGSYFGR IVRSVNPHKYHVVVDIKVT >Mature_259_residues MIKRLQNQQDIWKRIEIVGDIVIIGIPFNKRSEDLIEIANEILLTFPYIKSVWGRYRDVSGTYRLSTYVYLAGEKRSETI YKEHKCRYFLDFTKVFFSEKLSYEHLRVARQVKRGEIIINMFAGFGPFSILSAVLGKPKVIYSIDANPYAYYYMMVNVEL NRAYEVLPMYGDAFKRVYDLEDADRIIAPLPELADKAYEVALQKVKKGGTIHLYTEVETNRGEDPVGIAMNKYKGSYFGR IVRSVNPHKYHVVVDIKVT
Specific function: Unknown
COG id: COG2520
COG function: function code R; Predicted methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1557 and to yeast YHR070w [H]
Homologues:
Organism=Homo sapiens, GI145275187, Length=146, Percent_Identity=29.4520547945205, Blast_Score=78, Evalue=7e-15, Organism=Caenorhabditis elegans, GI193207541, Length=128, Percent_Identity=32.03125, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193207539, Length=128, Percent_Identity=32.03125, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193207537, Length=128, Percent_Identity=32.03125, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6321861, Length=156, Percent_Identity=26.2820512820513, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003402 [H]
Pfam domain/function: PF02475 Met_10 [H]
EC number: NA
Molecular weight: Translated: 30111; Mature: 30111
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRLQNQQDIWKRIEIVGDIVIIGIPFNKRSEDLIEIANEILLTFPYIKSVWGRYRDVS CCCCCCCHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC GTYRLSTYVYLAGEKRSETIYKEHKCRYFLDFTKVFFSEKLSYEHLRVARQVKRGEIIIN CEEEEEEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEE MFAGFGPFSILSAVLGKPKVIYSIDANPYAYYYMMVNVELNRAYEVLPMYGDAFKRVYDL EECCCCHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEEEECCEEEEEECHHHHHHHHHCC EDADRIIAPLPELADKAYEVALQKVKKGGTIHLYTEVETNRGEDPVGIAMNKYKGSYFGR CCCHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEECCCCHHHHH IVRSVNPHKYHVVVDIKVT HHHCCCCCEEEEEEEEEEC >Mature Secondary Structure MIKRLQNQQDIWKRIEIVGDIVIIGIPFNKRSEDLIEIANEILLTFPYIKSVWGRYRDVS CCCCCCCHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC GTYRLSTYVYLAGEKRSETIYKEHKCRYFLDFTKVFFSEKLSYEHLRVARQVKRGEIIIN CEEEEEEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEE MFAGFGPFSILSAVLGKPKVIYSIDANPYAYYYMMVNVELNRAYEVLPMYGDAFKRVYDL EECCCCHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEEEECCEEEEEECHHHHHHHHHCC EDADRIIAPLPELADKAYEVALQKVKKGGTIHLYTEVETNRGEDPVGIAMNKYKGSYFGR CCCHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEECCCCHHHHH IVRSVNPHKYHVVVDIKVT HHHCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]