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The map label for this gene is torD [H]

Identifier: 227081869

GI number: 227081869

Start: 1805586

End: 1806248

Strand: Direct

Name: torD [H]

Synonym: VCM66_1660

Alternate gene names: 227081869

Gene position: 1805586-1806248 (Clockwise)

Preceding gene: 227081867

Following gene: 227081870

Centisome position: 62.42

GC content: 46.15

Gene sequence:

>663_bases
ATGATGCAAGAACTGAAAATCCTCAATGAAAAGCGTGCTGAAATCTATTGGTGGCTGTCGAGCCTGTTTTTTAAAGAACT
GAGTGAGCAAGATATTGCTCGCTATCACTCAGCAGAAGTTCGTACTTTTTTAAGCGGACTCGCTGATGAGCAAAGCCTGA
ATCGCGAAGTTAAACATTTGGTCGAGGCGCTCAATCGCTTACAAGATCGCCAAGATGCGCAGCTAGAGCTCGCTGCAGAT
TTCTGTGATCTCTTTTTGAAATCAGACCGTGATTCCGCCCTGCCCTATGCTTCTGTCTATGCCGATCAAGGTTTACTCAA
TGGCAAGCCTGCGCAGCAAATGCGTGAGTTACTCAGCGCACATGGGGTTAAGGTTGAACAAAATCTCAATGAGCCCGAGG
ATCATCTTGCCATCCAGCTCGATTTTTTAGCGCATCTAGCAATCAGTGCTAACCAAATTGAGCACTCAGCACAACTGAGT
TTAGCGCTCCAAGCTCAGTCCGACTTCATAAGTCAACACTTACTCACTTGGCTACCTGCCTTTGCTGAACGTTGCACTCA
ATTTGATGCTTTCGGATTGTACTCAGCCGCCGCTCGTTTAGCGTTAGCCTTTATTCAGCAAGATAAACACTGTCTTGATG
AGTTGATCCAAGAGACCCATTAG

Upstream 100 bases:

>100_bases
TAACAACCTATTCTTTTCTTTTCACAAACTGTCACAATCACCGTGATAGCTGTTCATTTTTATGGTTTAGACTAAGCACA
CATCGATTGGGAGTGCAGAG

Downstream 100 bases:

>100_bases
CCAGACAGGCAAAGAGAAAAGCCAGCCTATTTTATCTATCCCAAACGGCTTCACGTGGTAGCCAACACCACGGCAGGGTC
AAATAGGAAGGGGATAGACG

Product: chaperone protein TorD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MMQELKILNEKRAEIYWWLSSLFFKELSEQDIARYHSAEVRTFLSGLADEQSLNREVKHLVEALNRLQDRQDAQLELAAD
FCDLFLKSDRDSALPYASVYADQGLLNGKPAQQMRELLSAHGVKVEQNLNEPEDHLAIQLDFLAHLAISANQIEHSAQLS
LALQAQSDFISQHLLTWLPAFAERCTQFDAFGLYSAAARLALAFIQQDKHCLDELIQETH

Sequences:

>Translated_220_residues
MMQELKILNEKRAEIYWWLSSLFFKELSEQDIARYHSAEVRTFLSGLADEQSLNREVKHLVEALNRLQDRQDAQLELAAD
FCDLFLKSDRDSALPYASVYADQGLLNGKPAQQMRELLSAHGVKVEQNLNEPEDHLAIQLDFLAHLAISANQIEHSAQLS
LALQAQSDFISQHLLTWLPAFAERCTQFDAFGLYSAAARLALAFIQQDKHCLDELIQETH
>Mature_220_residues
MMQELKILNEKRAEIYWWLSSLFFKELSEQDIARYHSAEVRTFLSGLADEQSLNREVKHLVEALNRLQDRQDAQLELAAD
FCDLFLKSDRDSALPYASVYADQGLLNGKPAQQMRELLSAHGVKVEQNLNEPEDHLAIQLDFLAHLAISANQIEHSAQLS
LALQAQSDFISQHLLTWLPAFAERCTQFDAFGLYSAAARLALAFIQQDKHCLDELIQETH

Specific function: Involved in the biogenesis of torA. Acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor [H]

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the torD/dmsD family. TorD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787232, Length=200, Percent_Identity=38.5, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023069
- InterPro:   IPR020945 [H]

Pfam domain/function: PF02613 Nitrate_red_del [H]

EC number: NA

Molecular weight: Translated: 25097; Mature: 25097

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQELKILNEKRAEIYWWLSSLFFKELSEQDIARYHSAEVRTFLSGLADEQSLNREVKHL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VEALNRLQDRQDAQLELAADFCDLFLKSDRDSALPYASVYADQGLLNGKPAQQMRELLSA
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
HGVKVEQNLNEPEDHLAIQLDFLAHLAISANQIEHSAQLSLALQAQSDFISQHLLTWLPA
CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAERCTQFDAFGLYSAAARLALAFIQQDKHCLDELIQETH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMQELKILNEKRAEIYWWLSSLFFKELSEQDIARYHSAEVRTFLSGLADEQSLNREVKHL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VEALNRLQDRQDAQLELAADFCDLFLKSDRDSALPYASVYADQGLLNGKPAQQMRELLSA
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
HGVKVEQNLNEPEDHLAIQLDFLAHLAISANQIEHSAQLSLALQAQSDFISQHLLTWLPA
CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAERCTQFDAFGLYSAAARLALAFIQQDKHCLDELIQETH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA