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The map label for this gene is ycbC [H]

Identifier: 227081867

GI number: 227081867

Start: 1803709

End: 1804557

Strand: Direct

Name: ycbC [H]

Synonym: VCM66_1658

Alternate gene names: 227081867

Gene position: 1803709-1804557 (Clockwise)

Preceding gene: 227081862

Following gene: 227081869

Centisome position: 62.36

GC content: 49.71

Gene sequence:

>849_bases
GTGCTGTTTTTTCGGACTGTTTTCTCTATGTTTGAGCTGAAAAAAATATTTTCTTCACTGTTGATGCCTCTGCCAGCGCT
GCTGATCATTGGTTTCGTGGGCCTGATGTTGATCATGTTCACGGCAAAACGTAAAACTGGCTGCCTAGTAGTGTTGTTCT
CCCTCACTGGGTTATTTCTGGTTTCCTTTCAACCCGTGGCGACTCGTTTGTTGATGCCACTTGAACGTACTTACACGGCA
TTTTTACCCGTAGAAGGTACTCTTGACTACGTGATGGTGCTCGGAAATGGCCATGTCATAGATGATGATATTCCCCCCAC
CTCCGAGCTTACTCGTGCTGCGCTCATGCGCTTAACAGAAGGCATTCGTATTAGTCGTATGTATCCGGGTTCGAAACTTA
TCCTCTCCGGTTACGCTGGCGGCAGCGAAGTTAGCCATGCTCGGATGATGGCGCGTGTCGCTTTGGCGTTAGGCGTGCCT
AAATCGGATATTATTTTGCTGGAAACCGCTAAAGATACTTGGGAAGAAGCGCGCCAAGCGGCCGCTTTCGTGCAACAAAA
ACGCATGGTGCTCGTCACCTCAGCCAGCCACATGAAGCGTGCGATGCGTGAATTTGAATCGGCGGGCTTAACACCTATTC
CTGCCCCGACCAATTACTTAGGCCACCTCAATATTATTCAGCCTTGGGATAAATACATTCCAAGATCGCGCTATCTTGAG
CAAACTGAGCAGTATTGGCATGAAACTTTAGGACTGATGTGGCAAACCCTGCGAGATACTGTGGCGGGGGATAGCGGTGA
GCCTGTGCTTACTCCACCGGTGGTTGAAGAGGCACCAAGCGCACCTTAG

Upstream 100 bases:

>100_bases
TCTTCTGTCACAGTAGCTTGAGTTATGATAACGAACCGTGCCTGCTATTCTGTCATACGAATGGCAGGAATAAAGAGGCT
TCGACTCTTTTTATAATCAA

Downstream 100 bases:

>100_bases
CCTCATCCGCTTTAGGGATCATATGTAGCATTAAAAAACTGGCATTTAGCCAGTTTTTTATTTTTACAATGCAGAAAACG
ATGAGGACACTCTCAGTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MLFFRTVFSMFELKKIFSSLLMPLPALLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTA
FLPVEGTLDYVMVLGNGHVIDDDIPPTSELTRAALMRLTEGIRISRMYPGSKLILSGYAGGSEVSHARMMARVALALGVP
KSDIILLETAKDTWEEARQAAAFVQQKRMVLVTSASHMKRAMREFESAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLE
QTEQYWHETLGLMWQTLRDTVAGDSGEPVLTPPVVEEAPSAP

Sequences:

>Translated_282_residues
MLFFRTVFSMFELKKIFSSLLMPLPALLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTA
FLPVEGTLDYVMVLGNGHVIDDDIPPTSELTRAALMRLTEGIRISRMYPGSKLILSGYAGGSEVSHARMMARVALALGVP
KSDIILLETAKDTWEEARQAAAFVQQKRMVLVTSASHMKRAMREFESAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLE
QTEQYWHETLGLMWQTLRDTVAGDSGEPVLTPPVVEEAPSAP
>Mature_282_residues
MLFFRTVFSMFELKKIFSSLLMPLPALLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTA
FLPVEGTLDYVMVLGNGHVIDDDIPPTSELTRAALMRLTEGIRISRMYPGSKLILSGYAGGSEVSHARMMARVALALGVP
KSDIILLETAKDTWEEARQAAAFVQQKRMVLVTSASHMKRAMREFESAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLE
QTEQYWHETLGLMWQTLRDTVAGDSGEPVLTPPVVEEAPSAP

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=260, Percent_Identity=43.0769230769231, Blast_Score=172, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 31452; Mature: 31452

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFFRTVFSMFELKKIFSSLLMPLPALLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH
VSFQPVATRLLMPLERTYTAFLPVEGTLDYVMVLGNGHVIDDDIPPTSELTRAALMRLTE
HHCHHHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHC
GIRISRMYPGSKLILSGYAGGSEVSHARMMARVALALGVPKSDIILLETAKDTWEEARQA
CCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHH
AAFVQQKRMVLVTSASHMKRAMREFESAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLE
HHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCHHHHCCHHHHHH
QTEQYWHETLGLMWQTLRDTVAGDSGEPVLTPPVVEEAPSAP
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MLFFRTVFSMFELKKIFSSLLMPLPALLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH
VSFQPVATRLLMPLERTYTAFLPVEGTLDYVMVLGNGHVIDDDIPPTSELTRAALMRLTE
HHCHHHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHC
GIRISRMYPGSKLILSGYAGGSEVSHARMMARVALALGVPKSDIILLETAKDTWEEARQA
CCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHH
AAFVQQKRMVLVTSASHMKRAMREFESAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLE
HHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCHHHHCCHHHHHH
QTEQYWHETLGLMWQTLRDTVAGDSGEPVLTPPVVEEAPSAP
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]