| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081687
Identifier: 227081687
GI number: 227081687
Start: 1591994
End: 1592269
Strand: Direct
Name: 227081687
Synonym: VCM66_1473
Alternate gene names: NA
Gene position: 1591994-1592269 (Clockwise)
Preceding gene: 227081685
Following gene: 227081690
Centisome position: 55.04
GC content: 42.39
Gene sequence:
>276_bases ATGGCTCGTACAATTATTTACACCTACAAAAACCAAGAGAAAACGCTGACTTTCTCATACGAAAAGCATCACAACATTCA TGAAGCGGTAGCCGAAGCGGAAGGCATTGACCTGACCGAATTTCTGAAGATGGAGATGCAACTGGAAGCGATTTCAGATA CTAAATCGGTGCGTAACTTCCGTGATAACCACTTCAAAAAGCTCGGTTTCGGTATCATCACGCTACAACCTAAAGAGAAT TTTGGTGTAGGCAAAAAACCAAAAGCGACTCGCTAA
Upstream 100 bases:
>100_bases GAAAGTCGAGAATATTGCTGCAATACCGCTTTTGGCTTGTGCTATCATCGCAGTCATAAAATCTTAACGACATAAACGCT GCTCAGCGTCGAGAGAAAAC
Downstream 100 bases:
>100_bases GCCAATATGCTTTAGCTGTAATTTTAAAATACCGATACCCAAACGACTTGGAGTTGCAGGTAGGCGGCAAGCGAGTGAAT CCCCATGAGCATAGACAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MARTIIYTYKNQEKTLTFSYEKHHNIHEAVAEAEGIDLTEFLKMEMQLEAISDTKSVRNFRDNHFKKLGFGIITLQPKEN FGVGKKPKATR
Sequences:
>Translated_91_residues MARTIIYTYKNQEKTLTFSYEKHHNIHEAVAEAEGIDLTEFLKMEMQLEAISDTKSVRNFRDNHFKKLGFGIITLQPKEN FGVGKKPKATR >Mature_90_residues ARTIIYTYKNQEKTLTFSYEKHHNIHEAVAEAEGIDLTEFLKMEMQLEAISDTKSVRNFRDNHFKKLGFGIITLQPKENF GVGKKPKATR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10574; Mature: 10443
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTIIYTYKNQEKTLTFSYEKHHNIHEAVAEAEGIDLTEFLKMEMQLEAISDTKSVRNF CCCEEEEEEECCCEEEEEEHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH RDNHFKKLGFGIITLQPKENFGVGKKPKATR HHHHHHCCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure ARTIIYTYKNQEKTLTFSYEKHHNIHEAVAEAEGIDLTEFLKMEMQLEAISDTKSVRNF CCEEEEEEECCCEEEEEEHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH RDNHFKKLGFGIITLQPKENFGVGKKPKATR HHHHHHCCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA