Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

Click here to switch to the map view.

The map label for this gene is 227081687

Identifier: 227081687

GI number: 227081687

Start: 1591994

End: 1592269

Strand: Direct

Name: 227081687

Synonym: VCM66_1473

Alternate gene names: NA

Gene position: 1591994-1592269 (Clockwise)

Preceding gene: 227081685

Following gene: 227081690

Centisome position: 55.04

GC content: 42.39

Gene sequence:

>276_bases
ATGGCTCGTACAATTATTTACACCTACAAAAACCAAGAGAAAACGCTGACTTTCTCATACGAAAAGCATCACAACATTCA
TGAAGCGGTAGCCGAAGCGGAAGGCATTGACCTGACCGAATTTCTGAAGATGGAGATGCAACTGGAAGCGATTTCAGATA
CTAAATCGGTGCGTAACTTCCGTGATAACCACTTCAAAAAGCTCGGTTTCGGTATCATCACGCTACAACCTAAAGAGAAT
TTTGGTGTAGGCAAAAAACCAAAAGCGACTCGCTAA

Upstream 100 bases:

>100_bases
GAAAGTCGAGAATATTGCTGCAATACCGCTTTTGGCTTGTGCTATCATCGCAGTCATAAAATCTTAACGACATAAACGCT
GCTCAGCGTCGAGAGAAAAC

Downstream 100 bases:

>100_bases
GCCAATATGCTTTAGCTGTAATTTTAAAATACCGATACCCAAACGACTTGGAGTTGCAGGTAGGCGGCAAGCGAGTGAAT
CCCCATGAGCATAGACAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MARTIIYTYKNQEKTLTFSYEKHHNIHEAVAEAEGIDLTEFLKMEMQLEAISDTKSVRNFRDNHFKKLGFGIITLQPKEN
FGVGKKPKATR

Sequences:

>Translated_91_residues
MARTIIYTYKNQEKTLTFSYEKHHNIHEAVAEAEGIDLTEFLKMEMQLEAISDTKSVRNFRDNHFKKLGFGIITLQPKEN
FGVGKKPKATR
>Mature_90_residues
ARTIIYTYKNQEKTLTFSYEKHHNIHEAVAEAEGIDLTEFLKMEMQLEAISDTKSVRNFRDNHFKKLGFGIITLQPKENF
GVGKKPKATR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10574; Mature: 10443

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTIIYTYKNQEKTLTFSYEKHHNIHEAVAEAEGIDLTEFLKMEMQLEAISDTKSVRNF
CCCEEEEEEECCCEEEEEEHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RDNHFKKLGFGIITLQPKENFGVGKKPKATR
HHHHHHCCCCEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARTIIYTYKNQEKTLTFSYEKHHNIHEAVAEAEGIDLTEFLKMEMQLEAISDTKSVRNF
CCEEEEEEECCCEEEEEEHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RDNHFKKLGFGIITLQPKENFGVGKKPKATR
HHHHHHCCCCEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA