| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is cheB-1
Identifier: 227081572
GI number: 227081572
Start: 1448651
End: 1449727
Strand: Reverse
Name: cheB-1
Synonym: VCM66_1356
Alternate gene names: 227081572
Gene position: 1449727-1448651 (Counterclockwise)
Preceding gene: 227081573
Following gene: 227081571
Centisome position: 50.12
GC content: 48.75
Gene sequence:
>1077_bases ATGAAGATTTTAGTTGTCGATGATTCTGCGTTAATGCGCACCACCATTAGCGACATATTGCAAAACATTCCGAATGCCGA GATTAAAACAGCACGTGATGGTATGGATGCCATCGACAAAGTGATGAAATGGCAACCGGATGTGATGACGTTAGACATCA ATATGCCCAACATGGATGGTCTAACTTGCCTTACGCAAATCATGGTTGAACGTCCCTTGCCGATTGTCATGCTCTCATCC CTCACCCATGAAGGTGCCATTACAACGCTCGAAGCGCTTTATCTTGGTGCGGTAGACTTTGTCGCCAAACCCGGAGGCAC TATCTGCGGTCGATTACAAGAAGTCGCACCACTGATCCGTGAAAAAGTTCGCGCGGCAGCGAAAATGAGAGTCAAAGTTC ACACGCAGCTTTCGGTATCACCAGCAGAAGTAGAGCACAAACATAAGTCACCTGTGGTGGAAAATAATGAAGACCACCAG CTTGCGATCATGGGGGTTTCGACAGGAGGGCCCGGCACTGTTGAAACGATACTGCGCCATCTGCCCGCCGATTTCTCATT ACCTATTATTGTTAACCAACACATGCCAGAGAGCTTCACTGCCGCCTTTGCACAAAGGCTTAATCGCCATCTGCAACAAC CCGTGAAAGAGATTAACCGTGCTTTAGTGCTTGAGGCTGGTACCGTTTATGTTTGCAAGGGTGACCGAGACTGCATTGTC ACGCTACGTGATGGTAAATTGGCTGCCATGCCCACGCCAAATGATAGCCATTTTTCATGGCATCCCAGCGTCTCCAAACT GGTTGCCAGCGCCATACGCACTTGTGGAGAAGATAACTTATTGTGCGTCATGCTAACGGGAATGGGCGACGACGGTGCCA CTGAAATGGCTCAGGTTGCTCAAGGAAACGGTATTGTTTTTGCCCAAGAACCCACAACCTGCGTAGTCCCCAGTATGCCG GAAGCATTACTTAAACGTGTACCCCATATTCCAACAGGAACTCCAGAGCACTTAGCTTATCTGATGACCGAAGTGGTGAG ACAGTCCAGTAGGGAGCTTCACTATGGCAATCATTAA
Upstream 100 bases:
>100_bases GAGTACTGTCCGCCGATCAATTGATCAGTAATACCGAGATGTACAAGTTACACATGGCTGCAAACGATATGGATAGCTAA GTTTTAAGGCTGGAGGGAAC
Downstream 100 bases:
>100_bases ACGCAGCGCTGCTACAGACAACCCAAATATTGAGATACTTTCTACTCCCGAGCAGATCGATGTGCTGAGCGCAGAAGCGC TGATGGAAGCTCTACAAGGT
Product: protein-glutamate methylesterase CheB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MKILVVDDSALMRTTISDILQNIPNAEIKTARDGMDAIDKVMKWQPDVMTLDINMPNMDGLTCLTQIMVERPLPIVMLSS LTHEGAITTLEALYLGAVDFVAKPGGTICGRLQEVAPLIREKVRAAAKMRVKVHTQLSVSPAEVEHKHKSPVVENNEDHQ LAIMGVSTGGPGTVETILRHLPADFSLPIIVNQHMPESFTAAFAQRLNRHLQQPVKEINRALVLEAGTVYVCKGDRDCIV TLRDGKLAAMPTPNDSHFSWHPSVSKLVASAIRTCGEDNLLCVMLTGMGDDGATEMAQVAQGNGIVFAQEPTTCVVPSMP EALLKRVPHIPTGTPEHLAYLMTEVVRQSSRELHYGNH
Sequences:
>Translated_358_residues MKILVVDDSALMRTTISDILQNIPNAEIKTARDGMDAIDKVMKWQPDVMTLDINMPNMDGLTCLTQIMVERPLPIVMLSS LTHEGAITTLEALYLGAVDFVAKPGGTICGRLQEVAPLIREKVRAAAKMRVKVHTQLSVSPAEVEHKHKSPVVENNEDHQ LAIMGVSTGGPGTVETILRHLPADFSLPIIVNQHMPESFTAAFAQRLNRHLQQPVKEINRALVLEAGTVYVCKGDRDCIV TLRDGKLAAMPTPNDSHFSWHPSVSKLVASAIRTCGEDNLLCVMLTGMGDDGATEMAQVAQGNGIVFAQEPTTCVVPSMP EALLKRVPHIPTGTPEHLAYLMTEVVRQSSRELHYGNH >Mature_358_residues MKILVVDDSALMRTTISDILQNIPNAEIKTARDGMDAIDKVMKWQPDVMTLDINMPNMDGLTCLTQIMVERPLPIVMLSS LTHEGAITTLEALYLGAVDFVAKPGGTICGRLQEVAPLIREKVRAAAKMRVKVHTQLSVSPAEVEHKHKSPVVENNEDHQ LAIMGVSTGGPGTVETILRHLPADFSLPIIVNQHMPESFTAAFAQRLNRHLQQPVKEINRALVLEAGTVYVCKGDRDCIV TLRDGKLAAMPTPNDSHFSWHPSVSKLVASAIRTCGEDNLLCVMLTGMGDDGATEMAQVAQGNGIVFAQEPTTCVVPSMP EALLKRVPHIPTGTPEHLAYLMTEVVRQSSRELHYGNH
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain
Homologues:
Organism=Escherichia coli, GI1788192, Length=323, Percent_Identity=38.6996904024768, Blast_Score=188, Evalue=6e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CHEB3_VIBCH (Q9KS59)
Other databases:
- EMBL: AE003852 - PIR: A82206 - RefSeq: NP_231044.1 - ProteinModelPortal: Q9KS59 - SMR: Q9KS59 - GeneID: 2614033 - GenomeReviews: AE003852_GR - KEGG: vch:VC1401 - TIGR: VC_1401 - HOGENOM: HBG705324 - OMA: PADFPWP - ProtClustDB: CLSK794127 - BRENDA: 3.1.1.61 - GO: GO:0005737 - GO: GO:0006935 - HAMAP: MF_00099 - InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 - Gene3D: G3DSA:3.40.50.180 - PIRSF: PIRSF000876 - SMART: SM00448
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg; SSF52738 Chemotax_RR_pGlu_Me-esterase; SSF52172 CheY_like
EC number: =3.1.1.61
Molecular weight: Translated: 39095; Mature: 39095
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS50122 CHEB; PS50110 RESPONSE_REGULATORY; PS00120 LIPASE_SER
Important sites: ACT_SITE 167-167 ACT_SITE 194-194 ACT_SITE 291-291
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILVVDDSALMRTTISDILQNIPNAEIKTARDGMDAIDKVMKWQPDVMTLDINMPNMDG CEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHCCCCCEEEEEECCCCCCH LTCLTQIMVERPLPIVMLSSLTHEGAITTLEALYLGAVDFVAKPGGTICGRLQEVAPLIR HHHHHHHHHHCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH EKVRAAAKMRVKVHTQLSVSPAEVEHKHKSPVVENNEDHQLAIMGVSTGGPGTVETILRH HHHHHHHHEEEEEEEEECCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHH LPADFSLPIIVNQHMPESFTAAFAQRLNRHLQQPVKEINRALVLEAGTVYVCKGDRDCIV CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEECCCCEEE TLRDGKLAAMPTPNDSHFSWHPSVSKLVASAIRTCGEDNLLCVMLTGMGDDGATEMAQVA EEECCEEEECCCCCCCCEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHH QGNGIVFAQEPTTCVVPSMPEALLKRVPHIPTGTPEHLAYLMTEVVRQSSRELHYGNH CCCCEEEECCCCEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKILVVDDSALMRTTISDILQNIPNAEIKTARDGMDAIDKVMKWQPDVMTLDINMPNMDG CEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHCCCCCEEEEEECCCCCCH LTCLTQIMVERPLPIVMLSSLTHEGAITTLEALYLGAVDFVAKPGGTICGRLQEVAPLIR HHHHHHHHHHCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH EKVRAAAKMRVKVHTQLSVSPAEVEHKHKSPVVENNEDHQLAIMGVSTGGPGTVETILRH HHHHHHHHEEEEEEEEECCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHH LPADFSLPIIVNQHMPESFTAAFAQRLNRHLQQPVKEINRALVLEAGTVYVCKGDRDCIV CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEECCCCEEE TLRDGKLAAMPTPNDSHFSWHPSVSKLVASAIRTCGEDNLLCVMLTGMGDDGATEMAQVA EEECCEEEECCCCCCCCEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHH QGNGIVFAQEPTTCVVPSMPEALLKRVPHIPTGTPEHLAYLMTEVVRQSSRELHYGNH CCCCEEEECCCCEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301