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The map label for this gene is 227081571

Identifier: 227081571

GI number: 227081571

Start: 1448008

End: 1448664

Strand: Reverse

Name: 227081571

Synonym: VCM66_1355

Alternate gene names: NA

Gene position: 1448664-1448008 (Counterclockwise)

Preceding gene: 227081572

Following gene: 227081570

Centisome position: 50.08

GC content: 45.21

Gene sequence:

>657_bases
ATGGCAATCATTAAACGCAGCGCTGCTACAGACAACCCAAATATTGAGATACTTTCTACTCCCGAGCAGATCGATGTGCT
GAGCGCAGAAGCGCTGATGGAAGCTCTACAAGGTGATGACCTCGAGCAAATTTTACGTGCGATTCATCAGTTGGAAGCTG
CGGACTCAGTTGAGTTTCAACAACATCAAGCGGCTTTATTTACTTTGCTCGATCGCGATACAGAACAAAACCCTTGCAGT
GATGCTGTTTTCTCACTGTTAGCCATCCGAAACAATGATGAAATCACGACTCGTTTGATCCCCCTGCTCGATTCAGAAGC
ACCCTATTTACGTAATCAAGCGATTGAGATTTTACAACATAGCCCGCAACAGCTGGAAAGGCACATTCAGGATTTACTGA
ACCATCAAGATCCTGATGTTCGGATCTTTGCTATCGATATTATCGGGCTTTTACCTCATCAATCGGTGCCAGAATGGTTA
ATGCAAGTCCTCCAGCACGAAGAACACATTAATGTGATTGGTACAGCGATCGACAGAGTCGCTCAGCTCTCCGACCCTAA
CTTCTCGACGATATTGGGGGAGGTCAAGCAACGATTTTCTCATGTACCCTATCTCGTTTTTGCCTGTGATGTGGCTATCA
AACGGTTAAATACCTAA

Upstream 100 bases:

>100_bases
GCATTACTTAAACGTGTACCCCATATTCCAACAGGAACTCCAGAGCACTTAGCTTATCTGATGACCGAAGTGGTGAGACA
GTCCAGTAGGGAGCTTCACT

Downstream 100 bases:

>100_bases
GGTCAGCATTATGAATGAGATTGTCATTACCGATACTGACTTCTGCCGATTCCGTGATTATTTTTATCAAAAAACAGGCA
TTTTTTTTGAGAACAGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: PBS Lyase HEAT-Like Repeat; HEAT Repeat Protein; Heat Repeat-Containing PBS Lyase; PBS Lyase HEAT-Like Repeat Protein

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MAIIKRSAATDNPNIEILSTPEQIDVLSAEALMEALQGDDLEQILRAIHQLEAADSVEFQQHQAALFTLLDRDTEQNPCS
DAVFSLLAIRNNDEITTRLIPLLDSEAPYLRNQAIEILQHSPQQLERHIQDLLNHQDPDVRIFAIDIIGLLPHQSVPEWL
MQVLQHEEHINVIGTAIDRVAQLSDPNFSTILGEVKQRFSHVPYLVFACDVAIKRLNT

Sequences:

>Translated_218_residues
MAIIKRSAATDNPNIEILSTPEQIDVLSAEALMEALQGDDLEQILRAIHQLEAADSVEFQQHQAALFTLLDRDTEQNPCS
DAVFSLLAIRNNDEITTRLIPLLDSEAPYLRNQAIEILQHSPQQLERHIQDLLNHQDPDVRIFAIDIIGLLPHQSVPEWL
MQVLQHEEHINVIGTAIDRVAQLSDPNFSTILGEVKQRFSHVPYLVFACDVAIKRLNT
>Mature_217_residues
AIIKRSAATDNPNIEILSTPEQIDVLSAEALMEALQGDDLEQILRAIHQLEAADSVEFQQHQAALFTLLDRDTEQNPCSD
AVFSLLAIRNNDEITTRLIPLLDSEAPYLRNQAIEILQHSPQQLERHIQDLLNHQDPDVRIFAIDIIGLLPHQSVPEWLM
QVLQHEEHINVIGTAIDRVAQLSDPNFSTILGEVKQRFSHVPYLVFACDVAIKRLNT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24616; Mature: 24485

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIIKRSAATDNPNIEILSTPEQIDVLSAEALMEALQGDDLEQILRAIHQLEAADSVEFQ
CCEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHH
QHQAALFTLLDRDTEQNPCSDAVFSLLAIRNNDEITTRLIPLLDSEAPYLRNQAIEILQH
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHC
SPQQLERHIQDLLNHQDPDVRIFAIDIIGLLPHQSVPEWLMQVLQHEEHINVIGTAIDRV
CHHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHH
AQLSDPNFSTILGEVKQRFSHVPYLVFACDVAIKRLNT
HHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIIKRSAATDNPNIEILSTPEQIDVLSAEALMEALQGDDLEQILRAIHQLEAADSVEFQ
CEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHH
QHQAALFTLLDRDTEQNPCSDAVFSLLAIRNNDEITTRLIPLLDSEAPYLRNQAIEILQH
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHC
SPQQLERHIQDLLNHQDPDVRIFAIDIIGLLPHQSVPEWLMQVLQHEEHINVIGTAIDRV
CHHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHH
AQLSDPNFSTILGEVKQRFSHVPYLVFACDVAIKRLNT
HHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA