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The map label for this gene is yohJ [C]

Identifier: 227081405

GI number: 227081405

Start: 1264222

End: 1264611

Strand: Reverse

Name: yohJ [C]

Synonym: VCM66_1188

Alternate gene names: 227081405

Gene position: 1264611-1264222 (Counterclockwise)

Preceding gene: 227081406

Following gene: 227081404

Centisome position: 43.72

GC content: 47.44

Gene sequence:

>390_bases
TTGCTGATTTTATTGATGATAAAAAAAATAGCTCAATACTGTGTCTCCATGGGACTGATTTTTCTCTGTCTGTTGGCGGG
CATCAACTTACAAACTTGGTTAGGCATTGCTATTCCCGGCAGCATTATTGGGTTACTGATCCTATTTGGCCTGATGGCCA
GCGGTTTAGTGCCTGTCGAATGGGTCAAACCCAGTGCCACCCTGTTTATTCGTTACATGATTTTGCTGTTCGTCCCGATC
AGTGTCGGCTTGATGGTGCACTTCGATACGCTACTGGCAAACCTCGCCCCGATCCTCGCTAGCGCTATCGGCGGTACCTT
AATTGTCATGGTGACACTGGGACTGATACTGGATCGAATGCTCAAGAAGGGGAAAAAGTCATGTGGCTGA

Upstream 100 bases:

>100_bases
CTGGTGCATGAACATCAAGCTGATCCAAAGAAAATGGCGATTTTAAAATCCGTCTACCATTACGTGGAAAAACTCGCTTG
CTAACATCGTTTATTTTTAC

Downstream 100 bases:

>100_bases
TCATCACACTTGGGGTATTTTTCGTCGCCCGTTGGGTGGCTCAAAAATGCACTACCCCACTGGCCAATCCGCTTCTGATC
AGTATTGGCATACTTATTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MLILLMIKKIAQYCVSMGLIFLCLLAGINLQTWLGIAIPGSIIGLLILFGLMASGLVPVEWVKPSATLFIRYMILLFVPI
SVGLMVHFDTLLANLAPILASAIGGTLIVMVTLGLILDRMLKKGKKSCG

Sequences:

>Translated_129_residues
MLILLMIKKIAQYCVSMGLIFLCLLAGINLQTWLGIAIPGSIIGLLILFGLMASGLVPVEWVKPSATLFIRYMILLFVPI
SVGLMVHFDTLLANLAPILASAIGGTLIVMVTLGLILDRMLKKGKKSCG
>Mature_129_residues
MLILLMIKKIAQYCVSMGLIFLCLLAGINLQTWLGIAIPGSIIGLLILFGLMASGLVPVEWVKPSATLFIRYMILLFVPI
SVGLMVHFDTLLANLAPILASAIGGTLIVMVTLGLILDRMLKKGKKSCG

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family

Homologues:

Organism=Escherichia coli, GI1788463, Length=101, Percent_Identity=49.5049504950495, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1188_VIBCM (C3LLS9)

Other databases:

- EMBL:   CP001233
- RefSeq:   YP_002809956.1
- GeneID:   7772466
- GenomeReviews:   CP001233_GR
- KEGG:   vcm:VCM66_1188
- OMA:   GVMNYYD
- ProtClustDB:   CLSK874270
- HAMAP:   MF_01144
- InterPro:   IPR005538
- InterPro:   IPR022957

Pfam domain/function: PF03788 LrgA

EC number: NA

Molecular weight: Translated: 13856; Mature: 13856

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x262d8094)-; HASH(0x2625f0d4)-; HASH(0x26a14830)-; HASH(0x26647bf4)-;

Cys/Met content:

2.3 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILLMIKKIAQYCVSMGLIFLCLLAGINLQTWLGIAIPGSIIGLLILFGLMASGLVPVE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHH
WVKPSATLFIRYMILLFVPISVGLMVHFDTLLANLAPILASAIGGTLIVMVTLGLILDRM
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKKGKKSCG
HHHHCCCCH
>Mature Secondary Structure
MLILLMIKKIAQYCVSMGLIFLCLLAGINLQTWLGIAIPGSIIGLLILFGLMASGLVPVE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHH
WVKPSATLFIRYMILLFVPISVGLMVHFDTLLANLAPILASAIGGTLIVMVTLGLILDRM
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKKGKKSCG
HHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA