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The map label for this gene is ybaZ [H]

Identifier: 227081238

GI number: 227081238

Start: 1089488

End: 1089790

Strand: Reverse

Name: ybaZ [H]

Synonym: VCM66_1020

Alternate gene names: 227081238

Gene position: 1089790-1089488 (Counterclockwise)

Preceding gene: 227081248

Following gene: 227081236

Centisome position: 37.68

GC content: 49.17

Gene sequence:

>303_bases
ATGGACCAGTTTTTACAACAGATCTTTGTCGTGATTCACCAAATTCCGGTTGGTCGGGTTTCGACTTACGGCGCTATCGC
CAAAATGGCCGGTTATCCGGGCTATGCACGCCATGTGGGCAAAGCGCTGGGTCATTTACCTGAGGGGAGTCAGTTACCTT
GGTTTCGAGTCATCAACAGCCAAGGCAAAATTTCACTACAAGGGGAAGATTTTGTGCGCCAGCGGCAATTATTGTTAGCC
GAAGGGATAGAGGTGAGTGACACCGGGAAAATATCGCTACGTAAATATCAATGGCAGCCGTGA

Upstream 100 bases:

>100_bases
ACAATGGAAAACAGAATCGCGATGAGAAATTGTAAGGCAGACAGTATCATGCCAACTCCCTATACCTATCCTTGGTAAAC
TTGTTTCGGGCACTTGTATT

Downstream 100 bases:

>100_bases
TGGCTGCCATTGTGCAATCAGAAAAGCTTAACGGAATAACGCCTTATCGCGAGTTATTCGCCATGCACACCAATCAGCAT
CATAGGTACGTGTTTAGTCG

Product: methylated-DNA--protein-cysteine methyltransferase-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MDQFLQQIFVVIHQIPVGRVSTYGAIAKMAGYPGYARHVGKALGHLPEGSQLPWFRVINSQGKISLQGEDFVRQRQLLLA
EGIEVSDTGKISLRKYQWQP

Sequences:

>Translated_100_residues
MDQFLQQIFVVIHQIPVGRVSTYGAIAKMAGYPGYARHVGKALGHLPEGSQLPWFRVINSQGKISLQGEDFVRQRQLLLA
EGIEVSDTGKISLRKYQWQP
>Mature_100_residues
MDQFLQQIFVVIHQIPVGRVSTYGAIAKMAGYPGYARHVGKALGHLPEGSQLPWFRVINSQGKISLQGEDFVRQRQLLLA
EGIEVSDTGKISLRKYQWQP

Specific function: Unknown

COG id: COG3695

COG function: function code L; Predicted methylated DNA-protein cysteine methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MGMT family [H]

Homologues:

Organism=Escherichia coli, GI1786659, Length=98, Percent_Identity=54.0816326530612, Blast_Score=110, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014048
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01035 DNA_binding_1 [H]

EC number: NA

Molecular weight: Translated: 11250; Mature: 11250

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQFLQQIFVVIHQIPVGRVSTYGAIAKMAGYPGYARHVGKALGHLPEGSQLPWFRVINS
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEECC
QGKISLQGEDFVRQRQLLLAEGIEVSDTGKISLRKYQWQP
CCEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MDQFLQQIFVVIHQIPVGRVSTYGAIAKMAGYPGYARHVGKALGHLPEGSQLPWFRVINS
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEECC
QGKISLQGEDFVRQRQLLLAEGIEVSDTGKISLRKYQWQP
CCEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]