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The map label for this gene is 227081248

Identifier: 227081248

GI number: 227081248

Start: 1100438

End: 1101268

Strand: Reverse

Name: 227081248

Synonym: VCM66_1030

Alternate gene names: NA

Gene position: 1101268-1100438 (Counterclockwise)

Preceding gene: 227081251

Following gene: 227081238

Centisome position: 38.07

GC content: 50.18

Gene sequence:

>831_bases
ATGTTACTTTCTGCATCCGCTTTGCTTTGGCTACCGCTGGCCTTAGCGATCATGGCGGGCTTCGCTCGTTATCACCGCGT
TAGTTGGGGACTACTGATCATCACTCTGCTCAGTGCATTAGGAAGTGGTTACCTCACCTTCGTTGGCGCTGGAATCATCT
GTGTTGGTTTTGCCCTGGCGTATCTGGCTGCGAATGGTCAATCACACTGGCGCACGACCGCTTGGGTTGCTTTGCTGCTG
TGGTGTTTAGCGCTATTTCTCCATTGGCTACCCGGTTTTTCTAACCTCAAAGTGCTGGATAAAGTGATCGCCAGTGCGCA
CAGTACCCCTTTCAGCCTTTATCTGAATTTAGATAAACCGCTGGTGTTTTTTGCTCTGTTACTCGCGTTTCCAGCACTAC
TGGGTCAGTCTAAAACTGCGAACATCAAGGCCACACTGCTGACCTTAGTGCCTTTATTTGCTCTCTTGCCGATCGCGGTT
TGGTTAGGCGCGCTGGCATTTGAATGGTCACTACCGGAGTGGTGGTGGATTTTTGCCCTCAACAATTTGCTATTTACTTG
TGTGGCAGAAGAAGCGCTATTTCGTGGTTTGATTCAGCAAAAAGCTCAGCAGCAGTTTGGCGCCATTGCCGGACTTTTGA
TCGCCAGTGCGCTGTTTGGTATGGCCCATTTTGCGGGTGGTCCATTACTAATGATCTTCGCCGCCCTTGCGGGGCTTGGC
TATGGTTTGGTGTTCCATTTTACCGGGCGTCTTTGGGTCAGTGTTGGCGTGCATTTCTTATTTAACTTCGCTCACTTGCT
GTTTTTCACCTATCCCATGCTGGCGCGTTAA

Upstream 100 bases:

>100_bases
GCCTGACTTCGTGGCTTGTCCTTGCTCGCTTAGCACGTCATTATCCCTGCCTTAAATACCTCAAGCTCTTGAAGCAAGAG
GAAATAAATAGGATATCAAT

Downstream 100 bases:

>100_bases
ACGCCTTTTCCATTTTTCTTATCCCTTTTTCCAAGCATAGAAAAGCCCAGCCAAATGGCTGGGCTTATGTTTCATGAACG
GTAGTTAACTTAGATTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: CAAX Amino Terminal Protease Family; CAAX Amino Terminal Protease Family Protein; Membrane-Associated CAAX Amino Terminal Protease; Membrane Associated Protease; Abortive Infection Protein; Membrane-Associated Protease

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MLLSASALLWLPLALAIMAGFARYHRVSWGLLIITLLSALGSGYLTFVGAGIICVGFALAYLAANGQSHWRTTAWVALLL
WCLALFLHWLPGFSNLKVLDKVIASAHSTPFSLYLNLDKPLVFFALLLAFPALLGQSKTANIKATLLTLVPLFALLPIAV
WLGALAFEWSLPEWWWIFALNNLLFTCVAEEALFRGLIQQKAQQQFGAIAGLLIASALFGMAHFAGGPLLMIFAALAGLG
YGLVFHFTGRLWVSVGVHFLFNFAHLLFFTYPMLAR

Sequences:

>Translated_276_residues
MLLSASALLWLPLALAIMAGFARYHRVSWGLLIITLLSALGSGYLTFVGAGIICVGFALAYLAANGQSHWRTTAWVALLL
WCLALFLHWLPGFSNLKVLDKVIASAHSTPFSLYLNLDKPLVFFALLLAFPALLGQSKTANIKATLLTLVPLFALLPIAV
WLGALAFEWSLPEWWWIFALNNLLFTCVAEEALFRGLIQQKAQQQFGAIAGLLIASALFGMAHFAGGPLLMIFAALAGLG
YGLVFHFTGRLWVSVGVHFLFNFAHLLFFTYPMLAR
>Mature_276_residues
MLLSASALLWLPLALAIMAGFARYHRVSWGLLIITLLSALGSGYLTFVGAGIICVGFALAYLAANGQSHWRTTAWVALLL
WCLALFLHWLPGFSNLKVLDKVIASAHSTPFSLYLNLDKPLVFFALLLAFPALLGQSKTANIKATLLTLVPLFALLPIAV
WLGALAFEWSLPEWWWIFALNNLLFTCVAEEALFRGLIQQKAQQQFGAIAGLLIASALFGMAHFAGGPLLMIFAALAGLG
YGLVFHFTGRLWVSVGVHFLFNFAHLLFFTYPMLAR

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30243; Mature: 30243

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSASALLWLPLALAIMAGFARYHRVSWGLLIITLLSALGSGYLTFVGAGIICVGFALA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YLAANGQSHWRTTAWVALLLWCLALFLHWLPGFSNLKVLDKVIASAHSTPFSLYLNLDKP
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCH
LVFFALLLAFPALLGQSKTANIKATLLTLVPLFALLPIAVWLGALAFEWSLPEWWWIFAL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
NNLLFTCVAEEALFRGLIQQKAQQQFGAIAGLLIASALFGMAHFAGGPLLMIFAALAGLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
YGLVFHFTGRLWVSVGVHFLFNFAHLLFFTYPMLAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLSASALLWLPLALAIMAGFARYHRVSWGLLIITLLSALGSGYLTFVGAGIICVGFALA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YLAANGQSHWRTTAWVALLLWCLALFLHWLPGFSNLKVLDKVIASAHSTPFSLYLNLDKP
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCH
LVFFALLLAFPALLGQSKTANIKATLLTLVPLFALLPIAVWLGALAFEWSLPEWWWIFAL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
NNLLFTCVAEEALFRGLIQQKAQQQFGAIAGLLIASALFGMAHFAGGPLLMIFAALAGLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
YGLVFHFTGRLWVSVGVHFLFNFAHLLFFTYPMLAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA