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The map label for this gene is ybeB [H]

Identifier: 227081126

GI number: 227081126

Start: 974032

End: 974349

Strand: Reverse

Name: ybeB [H]

Synonym: VCM66_0908

Alternate gene names: 227081126

Gene position: 974349-974032 (Counterclockwise)

Preceding gene: 227081127

Following gene: 227081125

Centisome position: 33.69

GC content: 45.6

Gene sequence:

>318_bases
TTGCAAGGTGAAGCACTTAAAGACTTTCTTTTCGACAAAGCTGACGACATGAAGGCGGTCGATATCGTAACTCTAGATGT
AAAAGAGAAATCCAGCGTTACTGATTACATGATTGTCTGTACTGGCACATCCAAAAGACATGTCGCCTCCATCGCTGAAC
ACGTAGCCAATGAAGCCAAACTTTCTGGCCTGCAACCACTGGGTATGAACGGCGAAAATGAAGGTGAATGGGTCGTTCTG
GATATGGGTAGCGTCATGTTGCATGTGATGCAAGAAGCGCCACGCGAACTCTATCAATTGGAAAAACTCTGGGGTTAA

Upstream 100 bases:

>100_bases
ATCCTCAGGCAAACCTACCTTTGCCTCACTAAAAGCGTGATATACTGCGCCCTTTTAAGCGAAAGCTGTATTTTATTGAT
GATTTTCAGAGGACATTCTC

Downstream 100 bases:

>100_bases
GTGTGAAGATTCAACTGATCGCCGTCGGTACTAAGATGCCTAAATGGGTCGAAGAAGGCTTCCAAGAGTATCGTCGTCGC
TTCCCTCATGATATGCCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MQGEALKDFLFDKADDMKAVDIVTLDVKEKSSVTDYMIVCTGTSKRHVASIAEHVANEAKLSGLQPLGMNGENEGEWVVL
DMGSVMLHVMQEAPRELYQLEKLWG

Sequences:

>Translated_105_residues
MQGEALKDFLFDKADDMKAVDIVTLDVKEKSSVTDYMIVCTGTSKRHVASIAEHVANEAKLSGLQPLGMNGENEGEWVVL
DMGSVMLHVMQEAPRELYQLEKLWG
>Mature_105_residues
MQGEALKDFLFDKADDMKAVDIVTLDVKEKSSVTDYMIVCTGTSKRHVASIAEHVANEAKLSGLQPLGMNGENEGEWVVL
DMGSVMLHVMQEAPRELYQLEKLWG

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=89, Percent_Identity=33.7078651685393, Blast_Score=63, Evalue=7e-11,
Organism=Escherichia coli, GI87081768, Length=104, Percent_Identity=61.5384615384615, Blast_Score=146, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 11670; Mature: 11670

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGEALKDFLFDKADDMKAVDIVTLDVKEKSSVTDYMIVCTGTSKRHVASIAEHVANEAK
CCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
LSGLQPLGMNGENEGEWVVLDMGSVMLHVMQEAPRELYQLEKLWG
HCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQGEALKDFLFDKADDMKAVDIVTLDVKEKSSVTDYMIVCTGTSKRHVASIAEHVANEAK
CCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
LSGLQPLGMNGENEGEWVVLDMGSVMLHVMQEAPRELYQLEKLWG
HCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]