Click here to switch to the map view.

The map label for this gene is 227080317

Identifier: 227080317

GI number: 227080317

Start: 79017

End: 79928

Strand: Reverse

Name: 227080317

Synonym: VCM66_0081

Alternate gene names: NA

Gene position: 79928-79017 (Counterclockwise)

Preceding gene: 227080326

Following gene: 227080312

Centisome position: 2.76

GC content: 50.66

Gene sequence:

>912_bases
ATGAATGAAAAACGCGCGTTGAGTTTGGGCTTGGCTTCGGTGCTGTTGTGGTCAACGGTCGCGACTGCCTTTAAATTGAC
GCTGGCCGAGTTAAACCCGCTGCAAATGGTGACCGTGGCGAGCATTGTCTCCGCACTCGCGTTACTGGTGATTTGTGCTG
CGATGGACAAGCTTAAGCTGATCGTCCCCACTTTACTGGCAAATCCGTTTTACTACCTGTTGCTTGGATTGATTAACCCA
CTCGCCTATTACCTGATTTTGTTTAAAGCCTATTCGCTGCTACCCGCTTCACAAGCGCAAGCCATCAACTACAGTTGGGC
GATTACTCTCACCTTGATGGCGGCACTGTTTCTCGGCCAACGCATTCGTAAACAAGATTGGATCGCCTGTGCAATGAGTT
ATCTCGGTGTGGTGGTGATCGCCACAAAAGGCGATCTGCTCGGCCTGCAATTTGAAAGTCCACTCGGGGTTGGTCTCGCC
CTGCTGTCGACTCTGCTGTGGGCGGGATATTGGATTCTCAACACCAAAAATAAAGCTGATCCGATCGTTGGGGTGTTACT
CGGCTTTCTGCTGGCAATCCCGTTTGCACTGGCGCTGTGTTGGCACGAAAACCTCAATTGGCAAGGCATCACCACCCAAG
GTTGGTTAGCGGTCACTTACGTGGGACTGTTTGAAATGGGCATTACGTTTGTACTCTGGCTCAGCGCACTGAAAAATACC
CAGAACACCGCACGCATCAGTAACCTGATTTTTGCTTCGCCTTTTATTTCGCTGTTTCTACTCGCGACCATCATTGGCGA
AGCGATCCACCCAACCACTTTGATCGGTTTAGTGCTGATTATTGCGGGACTTGTGGTTCAGCAGTGGCAAGGCCGTAAAG
CGCAACCTAGCGAAGCAAAACTTAACCCCTAA

Upstream 100 bases:

>100_bases
TCTCGATCAAAATGGTATTTCGGCACTGGATAAATGTCCAGTTTGTTGCGCGTTTATTCTCCCCTAGACTAGCGAAAAAC
AAGGATAAGAGAGTTTCAGG

Downstream 100 bases:

>100_bases
ACCCACTGGCCGGCGACGTAGCCACTCGACCAAGCCCATTGGAAGTTATAGCCGCCGAGCCAGCCAGTCACATCCATCAC
TTCACCGATAAAGAATAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Domain-Containing Protein; Transporter Drug/Metabolite Exporter Family; DMT Family Permease; Drug/Metabolite Exporter Family Protein; DMT Superfamily Permease; Drug/Metabolite Transporter Superfamily Permease; Drug/Metabolite Transporter Permease; Permease DMT Superfamily; Permease Outative

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MNEKRALSLGLASVLLWSTVATAFKLTLAELNPLQMVTVASIVSALALLVICAAMDKLKLIVPTLLANPFYYLLLGLINP
LAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFLGQRIRKQDWIACAMSYLGVVVIATKGDLLGLQFESPLGVGLA
LLSTLLWAGYWILNTKNKADPIVGVLLGFLLAIPFALALCWHENLNWQGITTQGWLAVTYVGLFEMGITFVLWLSALKNT
QNTARISNLIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGLVVQQWQGRKAQPSEAKLNP

Sequences:

>Translated_303_residues
MNEKRALSLGLASVLLWSTVATAFKLTLAELNPLQMVTVASIVSALALLVICAAMDKLKLIVPTLLANPFYYLLLGLINP
LAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFLGQRIRKQDWIACAMSYLGVVVIATKGDLLGLQFESPLGVGLA
LLSTLLWAGYWILNTKNKADPIVGVLLGFLLAIPFALALCWHENLNWQGITTQGWLAVTYVGLFEMGITFVLWLSALKNT
QNTARISNLIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGLVVQQWQGRKAQPSEAKLNP
>Mature_303_residues
MNEKRALSLGLASVLLWSTVATAFKLTLAELNPLQMVTVASIVSALALLVICAAMDKLKLIVPTLLANPFYYLLLGLINP
LAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFLGQRIRKQDWIACAMSYLGVVVIATKGDLLGLQFESPLGVGLA
LLSTLLWAGYWILNTKNKADPIVGVLLGFLLAIPFALALCWHENLNWQGITTQGWLAVTYVGLFEMGITFVLWLSALKNT
QNTARISNLIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGLVVQQWQGRKAQPSEAKLNP

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33014; Mature: 33014

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKRALSLGLASVLLWSTVATAFKLTLAELNPLQMVTVASIVSALALLVICAAMDKLKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVPTLLANPFYYLLLGLINPLAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFLGQ
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHH
RIRKQDWIACAMSYLGVVVIATKGDLLGLQFESPLGVGLALLSTLLWAGYWILNTKNKAD
HHHHHHHHHHHHHHHCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCEEECCCCCC
PIVGVLLGFLLAIPFALALCWHENLNWQGITTQGWLAVTYVGLFEMGITFVLWLSALKNT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
QNTARISNLIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGLVVQQWQGRKAQPSEAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LNP
CCC
>Mature Secondary Structure
MNEKRALSLGLASVLLWSTVATAFKLTLAELNPLQMVTVASIVSALALLVICAAMDKLKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVPTLLANPFYYLLLGLINPLAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFLGQ
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHH
RIRKQDWIACAMSYLGVVVIATKGDLLGLQFESPLGVGLALLSTLLWAGYWILNTKNKAD
HHHHHHHHHHHHHHHCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCEEECCCCCC
PIVGVLLGFLLAIPFALALCWHENLNWQGITTQGWLAVTYVGLFEMGITFVLWLSALKNT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
QNTARISNLIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGLVVQQWQGRKAQPSEAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LNP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA