| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
Click here to switch to the map view.
The map label for this gene is wzyE [C]
Identifier: 226950126
GI number: 226950126
Start: 3078273
End: 3079748
Strand: Reverse
Name: wzyE [C]
Synonym: CLM_3080
Alternate gene names: 226950126
Gene position: 3079748-3078273 (Counterclockwise)
Preceding gene: 226950127
Following gene: 226950125
Centisome position: 74.12
GC content: 21.14
Gene sequence:
>1476_bases ATGGAAAAAATAATATTATTTGGTGCTTCAAAAATGGGTGAGGCTGCTTGTGTGTTATTAAAGGATACATATGAAATAAC TTATTTTTGTGATAATGATAGAAATAAGTGGGGAAAAGAATTTTGTAATATAAAAATAATTTCACCAGAAGAACTAAATA ATAAAAAATTTAAAAATATAAAGATTGTTATAACAAGTATGTACTACAAGGAAATAAAAGAACAATTAATAGGTTTAGGG TTAGAAAATTTTCAAATATTTAAATATAATATTGTTAGCAAAAAAGAAGAAGGATATTTACAACAAAAGAGTACTGAAAA TAAATATATGATAGATAAGTTATTTGTAAATGGAAATAAAACGATAAAATACTTACATATTATGAGAGATAGTTTTTTTA ATAAAAGATTTATAGAATTAATTAATAATAATCTAAAGCAAGAAGAACATAAATTTATTATAATAAAAAATATTGATTAT AATTTTCGATATATGAAGGATTCTTTAAAATATGATAATGTTGAAATCTTGTATGATAGATATTTTGAAAATAAGCTTTA TTACTATGTGAAAAATAGTAAGGCTATATATATATATTGTTTATATGATTACATATGTGAATTTATATGTAAGTATAAAA TTTACAAAGAAGCTGAACTAAATTGGACTGTGTGGGGCGGAGATGTGTATGAATATACCAATATAGAGATATATGATCAA TATACAAGAGAATTCTTAATTAAAAATAATTTGTATATTGATGAAAGGTTGAAAAACAGTGAATATAGAATTAATGCTAT AAAAAAAATAGATTATATATTAACTCCTATTTATGGAGATTATAAAATTATAAAGAAAAATTATAATACTAATGCACGGT TAAAAAGTTTTCCGTTTGTTTATGATATTATAAATTATAAAAACCAATGTTTAAAATCAGCATATAATTTAAAGAAAAAA TATAAATATGTTTTTTTGTTGGGGAATTCAGGATATCCATCTAGCAATCATTTAGATATTATTTATAAATTAAAAGAAAT AAAAAATAAAAATTTTTGTGTGTTATGTCCTTTATCCTATGGTAATAAAAATTACATAGAAAAATTAATAAAGGTTTCTA AGGATATTTTGGGAGAAAGGTTTATACCATTAAATAATTTTATGGAGTTAGATGAATACACAGCTATTTTGGATGAAGTG GATGTTGCTATTATGAATCATAATAGACAGCAGGCTGTAGGGAATATGATTTTACTATTATACTTAGGTAAAAAAATATT TTTAAAGAAGAGTGTTACTACTTTTTCTTTTTTACAAGAGAAAGGGTTTCAAATTTTTGATATTGAAAATTTTGTTGATA ACATTAATAGTATAGAAAGAATACAATTAAATAGTTTGAAAAATCAAGAAGCTGTTATAAAAAATTTTAGTAATGATAAA GTTCTAGAGATATATAAAGAGATTTTTAATTATTAA
Upstream 100 bases:
>100_bases GAGTTAAGTTTAGAGGATCAAAACTACATAATTAATGAAATAAATAAAATATTTTTATAAGTTTTTTGGTGTTTTGATTT AAATTTAGGAGGATTTATGT
Downstream 100 bases:
>100_bases GCTATTATATATAAAAATAAAGATATTGGGTGATAAAATGAAAACTGAAAAATATAAAGTGTGTATTGTAGGACAAGGAT TTGTAGGTTTGCCTTTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: TPR/Glycosyl Transferase Domain Protein; Capsular Polysaccharide Synthesis Protein; Asparagine Synthetase; Asparagine Synthetase Glutamine-Hydrolyzing
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MEKIILFGASKMGEAACVLLKDTYEITYFCDNDRNKWGKEFCNIKIISPEELNNKKFKNIKIVITSMYYKEIKEQLIGLG LENFQIFKYNIVSKKEEGYLQQKSTENKYMIDKLFVNGNKTIKYLHIMRDSFFNKRFIELINNNLKQEEHKFIIIKNIDY NFRYMKDSLKYDNVEILYDRYFENKLYYYVKNSKAIYIYCLYDYICEFICKYKIYKEAELNWTVWGGDVYEYTNIEIYDQ YTREFLIKNNLYIDERLKNSEYRINAIKKIDYILTPIYGDYKIIKKNYNTNARLKSFPFVYDIINYKNQCLKSAYNLKKK YKYVFLLGNSGYPSSNHLDIIYKLKEIKNKNFCVLCPLSYGNKNYIEKLIKVSKDILGERFIPLNNFMELDEYTAILDEV DVAIMNHNRQQAVGNMILLLYLGKKIFLKKSVTTFSFLQEKGFQIFDIENFVDNINSIERIQLNSLKNQEAVIKNFSNDK VLEIYKEIFNY
Sequences:
>Translated_491_residues MEKIILFGASKMGEAACVLLKDTYEITYFCDNDRNKWGKEFCNIKIISPEELNNKKFKNIKIVITSMYYKEIKEQLIGLG LENFQIFKYNIVSKKEEGYLQQKSTENKYMIDKLFVNGNKTIKYLHIMRDSFFNKRFIELINNNLKQEEHKFIIIKNIDY NFRYMKDSLKYDNVEILYDRYFENKLYYYVKNSKAIYIYCLYDYICEFICKYKIYKEAELNWTVWGGDVYEYTNIEIYDQ YTREFLIKNNLYIDERLKNSEYRINAIKKIDYILTPIYGDYKIIKKNYNTNARLKSFPFVYDIINYKNQCLKSAYNLKKK YKYVFLLGNSGYPSSNHLDIIYKLKEIKNKNFCVLCPLSYGNKNYIEKLIKVSKDILGERFIPLNNFMELDEYTAILDEV DVAIMNHNRQQAVGNMILLLYLGKKIFLKKSVTTFSFLQEKGFQIFDIENFVDNINSIERIQLNSLKNQEAVIKNFSNDK VLEIYKEIFNY >Mature_491_residues MEKIILFGASKMGEAACVLLKDTYEITYFCDNDRNKWGKEFCNIKIISPEELNNKKFKNIKIVITSMYYKEIKEQLIGLG LENFQIFKYNIVSKKEEGYLQQKSTENKYMIDKLFVNGNKTIKYLHIMRDSFFNKRFIELINNNLKQEEHKFIIIKNIDY NFRYMKDSLKYDNVEILYDRYFENKLYYYVKNSKAIYIYCLYDYICEFICKYKIYKEAELNWTVWGGDVYEYTNIEIYDQ YTREFLIKNNLYIDERLKNSEYRINAIKKIDYILTPIYGDYKIIKKNYNTNARLKSFPFVYDIINYKNQCLKSAYNLKKK YKYVFLLGNSGYPSSNHLDIIYKLKEIKNKNFCVLCPLSYGNKNYIEKLIKVSKDILGERFIPLNNFMELDEYTAILDEV DVAIMNHNRQQAVGNMILLLYLGKKIFLKKSVTTFSFLQEKGFQIFDIENFVDNINSIERIQLNSLKNQEAVIKNFSNDK VLEIYKEIFNY
Specific function: Could Be Involved In Eca Polysaccharide Chain Elongation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral membrane protein (Potential) [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59020; Mature: 59020
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKIILFGASKMGEAACVLLKDTYEITYFCDNDRNKWGKEFCNIKIISPEELNNKKFKNI CCEEEEECCCCCCCEEEEEEEECEEEEEEECCCCCCCCHHHCCEEEECCHHCCCCCCCEE KIVITSMYYKEIKEQLIGLGLENFQIFKYNIVSKKEEGYLQQKSTENKYMIDKLFVNGNK EEEEEHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHCCCCCCCEEEEEEEECCCC TIKYLHIMRDSFFNKRFIELINNNLKQEEHKFIIIKNIDYNFRYMKDSLKYDNVEILYDR EEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCCEEEEEEE YFENKLYYYVKNSKAIYIYCLYDYICEFICKYKIYKEAELNWTVWGGDVYEYTNIEIYDQ HHCCEEEEEEECCCEEEEEEHHHHHHHHHHHHHEEEECCEEEEEECCCEEEECCEEEEEH YTREFLIKNNLYIDERLKNSEYRINAIKKIDYILTPIYGDYKIIKKNYNTNARLKSFPFV HHHHHHHCCCCEEEHHCCCCCEEEEHHEEEEEEECCCCCCEEEEEECCCCCCEEECCCHH YDIINYKNQCLKSAYNLKKKYKYVFLLGNSGYPSSNHLDIIYKLKEIKNKNFCVLCPLSY HHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCEEEEEEEHHHCCCCEEEEEECCC GNKNYIEKLIKVSKDILGERFIPLNNFMELDEYTAILDEVDVAIMNHNRQQAVGNMILLL CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHEEEEE YLGKKIFLKKSVTTFSFLQEKGFQIFDIENFVDNINSIERIQLNSLKNQEAVIKNFSNDK HHCCCEEEECCCHHHHHHHHCCCEEEEHHHHHHCCCCEEEEEHHCCCCHHHHHHCCCCCH VLEIYKEIFNY HHHHHHHHHCC >Mature Secondary Structure MEKIILFGASKMGEAACVLLKDTYEITYFCDNDRNKWGKEFCNIKIISPEELNNKKFKNI CCEEEEECCCCCCCEEEEEEEECEEEEEEECCCCCCCCHHHCCEEEECCHHCCCCCCCEE KIVITSMYYKEIKEQLIGLGLENFQIFKYNIVSKKEEGYLQQKSTENKYMIDKLFVNGNK EEEEEHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHCCCCCCCEEEEEEEECCCC TIKYLHIMRDSFFNKRFIELINNNLKQEEHKFIIIKNIDYNFRYMKDSLKYDNVEILYDR EEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCCEEEEEEE YFENKLYYYVKNSKAIYIYCLYDYICEFICKYKIYKEAELNWTVWGGDVYEYTNIEIYDQ HHCCEEEEEEECCCEEEEEEHHHHHHHHHHHHHEEEECCEEEEEECCCEEEECCEEEEEH YTREFLIKNNLYIDERLKNSEYRINAIKKIDYILTPIYGDYKIIKKNYNTNARLKSFPFV HHHHHHHCCCCEEEHHCCCCCEEEEHHEEEEEEECCCCCCEEEEEECCCCCCEEECCCHH YDIINYKNQCLKSAYNLKKKYKYVFLLGNSGYPSSNHLDIIYKLKEIKNKNFCVLCPLSY HHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCEEEEEEEHHHCCCCEEEEEECCC GNKNYIEKLIKVSKDILGERFIPLNNFMELDEYTAILDEVDVAIMNHNRQQAVGNMILLL CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHEEEEE YLGKKIFLKKSVTTFSFLQEKGFQIFDIENFVDNINSIERIQLNSLKNQEAVIKNFSNDK HHCCCEEEECCCHHHHHHHHCCCEEEEHHHHHHCCCCEEEEEHHCCCCHHHHHHCCCCCH VLEIYKEIFNY HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA