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The map label for this gene is trg [C]

Identifier: 226949018

GI number: 226949018

Start: 1980736

End: 1982739

Strand: Direct

Name: trg [C]

Synonym: CLM_1932

Alternate gene names: 226949018

Gene position: 1980736-1982739 (Clockwise)

Preceding gene: 226949015

Following gene: 226949020

Centisome position: 47.67

GC content: 30.29

Gene sequence:

>2004_bases
ATGAAATTTAAAACCATGAAAGGGAAAATGCTTACATATTTTCTATCCCTTTTTTTAATTATTTGTATTGCAATATCATT
TATGGCATATTTCATGTCCAAAAGAATGATAGAAAGAAAAGCTTCAAGTCTTATGTCGGAGGTAAGTAGACAAGCAGTTC
AAAATATAGAAGCGCGTCTTAATGGAACTCTTGATTCAATAGAAACTGTAGCTAATATGCCAACAATAAAAGATCCAAAG
CTAGGTTGGGATAAAAAGAAAACCATATTAGATGAGGAAATTAAATTACATGGACATATAAAAATGGGTATAGTTAGTAA
AGAGGGCCAGTCAATCCAAACTGATGGTACTACAGTTAATGTAAAGGATAGACCTTATTTTAAAAAAGCAATGGAAGGAA
AGAGTACTATATCTGAGCCTATAGTAAGTAAAGTTGATGGTAAGGTAGTTATAATTTATACAGTTCCAATTAAAAATGGT
AATATTATTATGGGGGCACTTACAGCTGTAAGAGCGGGAAATGATATAAGTAATATTTCAAATAGTATAAAGGTAGGAGA
ATCTGGAGGAGCATATTTAATAGATTCTGCTGGAACAGTAATAGCTCATAAAAATAAAGAATCTGTTATTAAAAGAGAAA
ATAGTATAAAAGATGCTCAAAGTAATGAAGAATTAAAACCAATAGCAGCCATAGAGAAGTCCATGATTGAAGGAAAAGAA
GGGATTGGGCAGTACAAATATAAAGGAGCTGAAAAATATATAAGTTATAGTCCAATGAAAAGTACAGGTTGGTCTCTAGC
TATATATGCACCTAAAAACGAAATTTTAAAGGAAGTATCTGAAATTACAAGAAATATAATTATAGTATCTACTTTAGGAA
TAGGTATAGCTTTAGTTTGCATATGGTTTATTTCTACACAAATATCTAATAATTTAATATCTATGAGAGATAGTTTAAAC
ATAGTAGCAACGGGAGATTTGACAACTAATGTAAATTCAAACATAGAGAAGGAAAAAGATGAGATAGGTCATATGGCAAA
GGCTCTATCTAAAACGGTGCTTTCTATAGGCAGTATGATAAATAGTTTAAAAGGAAGTTCCTTTAATATAGATGATAAAG
CAAATAATTTAGCCGCTATATCAGAAGAATTTACGGCTACCACAGAGAATGTATCAACAGCAATACAAGAAGTAGCTACA
GGTGCCACTAATCAAGCACAAGCTTTAACTGAAATAGTATCTATGCTTAATGATTTCAGTGATAAAATAAATTCTACAGT
AAATAACATAGAAGAAATAGATGGAATGTCTAAAGAAATAGATGAAAAAGCAAATGTTAGTAATAAAGACATGAAGGAGC
TTTTAAATTCTATAGAAAATTTAACTAAGGTATTTGAAAATTTTGAAACAAAAATTTGGACTATGGAATCTAATGTGCAA
AAGATTAATGAAATAACTAATCTTATAAATGATATAGCTGAAAAAACTAATCTTTTAGCTTTAAACGCTGCTATAGAGGC
TGCTCGTGCCGGAGAATCAGGAAAAGGGTTTGCCGTTGTGGCAGAGGAAATAAGAAAGCTTGCTGAGATGAGTAGAAAGT
CTTCGGAGGACATATATAACATAGTAAATGGAGTTTTAGAAGATACCAAGGATATGGTTAAAAGTTCAAATGAAGTAAAT
GAAAAATTAAATGGTCAAAGATCTACTGCAGATGAAGCTATGAATTCTTTTATGGAAATATCAAAATCTGTTACAAATAT
GATACCTAAAATAAGAAATATAAATAATTCAGCCAATATTATAGAAAAAAATAAGAATGAAATCTTAAATAAATCAGAAA
CTATAGCTTCTATATCTCAGGAAATATCTGCTTCTGCGGAAGAAATATCTGCATCTTCTGAGGAGATGAGTGTATCCTCA
GAGGAAGTAGCTAATACAGCTCAAAGCTTAAATGAAATGACGCAAGATATGTTAAATGAAATGAATAAATTTAAAACAGA
GTAG

Upstream 100 bases:

>100_bases
TATTTATTTTAAAATAATTAATATATTGTAAAGATTTATGAAAAAAATATCGAATAATAAAAGGTAATAACTAAGTATAT
TTTATAAGGAGGAGTAATAA

Downstream 100 bases:

>100_bases
AATAACAATTTAAAATATGAATTGAAGAAGTATGGTGATGCTTAGTATACTTCTTCAATTTTTTATTAAATATTTATTTA
ATTAGAACCATTAATAATAC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 667; Mature: 667

Protein sequence:

>667_residues
MKFKTMKGKMLTYFLSLFLIICIAISFMAYFMSKRMIERKASSLMSEVSRQAVQNIEARLNGTLDSIETVANMPTIKDPK
LGWDKKKTILDEEIKLHGHIKMGIVSKEGQSIQTDGTTVNVKDRPYFKKAMEGKSTISEPIVSKVDGKVVIIYTVPIKNG
NIIMGALTAVRAGNDISNISNSIKVGESGGAYLIDSAGTVIAHKNKESVIKRENSIKDAQSNEELKPIAAIEKSMIEGKE
GIGQYKYKGAEKYISYSPMKSTGWSLAIYAPKNEILKEVSEITRNIIIVSTLGIGIALVCIWFISTQISNNLISMRDSLN
IVATGDLTTNVNSNIEKEKDEIGHMAKALSKTVLSIGSMINSLKGSSFNIDDKANNLAAISEEFTATTENVSTAIQEVAT
GATNQAQALTEIVSMLNDFSDKINSTVNNIEEIDGMSKEIDEKANVSNKDMKELLNSIENLTKVFENFETKIWTMESNVQ
KINEITNLINDIAEKTNLLALNAAIEAARAGESGKGFAVVAEEIRKLAEMSRKSSEDIYNIVNGVLEDTKDMVKSSNEVN
EKLNGQRSTADEAMNSFMEISKSVTNMIPKIRNINNSANIIEKNKNEILNKSETIASISQEISASAEEISASSEEMSVSS
EEVANTAQSLNEMTQDMLNEMNKFKTE

Sequences:

>Translated_667_residues
MKFKTMKGKMLTYFLSLFLIICIAISFMAYFMSKRMIERKASSLMSEVSRQAVQNIEARLNGTLDSIETVANMPTIKDPK
LGWDKKKTILDEEIKLHGHIKMGIVSKEGQSIQTDGTTVNVKDRPYFKKAMEGKSTISEPIVSKVDGKVVIIYTVPIKNG
NIIMGALTAVRAGNDISNISNSIKVGESGGAYLIDSAGTVIAHKNKESVIKRENSIKDAQSNEELKPIAAIEKSMIEGKE
GIGQYKYKGAEKYISYSPMKSTGWSLAIYAPKNEILKEVSEITRNIIIVSTLGIGIALVCIWFISTQISNNLISMRDSLN
IVATGDLTTNVNSNIEKEKDEIGHMAKALSKTVLSIGSMINSLKGSSFNIDDKANNLAAISEEFTATTENVSTAIQEVAT
GATNQAQALTEIVSMLNDFSDKINSTVNNIEEIDGMSKEIDEKANVSNKDMKELLNSIENLTKVFENFETKIWTMESNVQ
KINEITNLINDIAEKTNLLALNAAIEAARAGESGKGFAVVAEEIRKLAEMSRKSSEDIYNIVNGVLEDTKDMVKSSNEVN
EKLNGQRSTADEAMNSFMEISKSVTNMIPKIRNINNSANIIEKNKNEILNKSETIASISQEISASAEEISASSEEMSVSS
EEVANTAQSLNEMTQDMLNEMNKFKTE
>Mature_667_residues
MKFKTMKGKMLTYFLSLFLIICIAISFMAYFMSKRMIERKASSLMSEVSRQAVQNIEARLNGTLDSIETVANMPTIKDPK
LGWDKKKTILDEEIKLHGHIKMGIVSKEGQSIQTDGTTVNVKDRPYFKKAMEGKSTISEPIVSKVDGKVVIIYTVPIKNG
NIIMGALTAVRAGNDISNISNSIKVGESGGAYLIDSAGTVIAHKNKESVIKRENSIKDAQSNEELKPIAAIEKSMIEGKE
GIGQYKYKGAEKYISYSPMKSTGWSLAIYAPKNEILKEVSEITRNIIIVSTLGIGIALVCIWFISTQISNNLISMRDSLN
IVATGDLTTNVNSNIEKEKDEIGHMAKALSKTVLSIGSMINSLKGSSFNIDDKANNLAAISEEFTATTENVSTAIQEVAT
GATNQAQALTEIVSMLNDFSDKINSTVNNIEEIDGMSKEIDEKANVSNKDMKELLNSIENLTKVFENFETKIWTMESNVQ
KINEITNLINDIAEKTNLLALNAAIEAARAGESGKGFAVVAEEIRKLAEMSRKSSEDIYNIVNGVLEDTKDMVKSSNEVN
EKLNGQRSTADEAMNSFMEISKSVTNMIPKIRNINNSANIIEKNKNEILNKSETIASISQEISASAEEISASSEEMSVSS
EEVANTAQSLNEMTQDMLNEMNKFKTE

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=344, Percent_Identity=24.7093023255814, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789453, Length=306, Percent_Identity=30.3921568627451, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI2367378, Length=262, Percent_Identity=25.9541984732824, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1788194, Length=122, Percent_Identity=39.344262295082, Blast_Score=80, Evalue=5e-16,
Organism=Escherichia coli, GI1788195, Length=237, Percent_Identity=27.4261603375527, Blast_Score=78, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 73242; Mature: 73242

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50885 HAMP ; PS00135 TRYPSIN_SER ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKTMKGKMLTYFLSLFLIICIAISFMAYFMSKRMIERKASSLMSEVSRQAVQNIEARL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NGTLDSIETVANMPTIKDPKLGWDKKKTILDEEIKLHGHIKMGIVSKEGQSIQTDGTTVN
CCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEECEEEEEEEECCCCEEECCCCEEE
VKDRPYFKKAMEGKSTISEPIVSKVDGKVVIIYTVPIKNGNIIMGALTAVRAGNDISNIS
ECCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEHHHHHHHCCCCHHHHH
NSIKVGESGGAYLIDSAGTVIAHKNKESVIKRENSIKDAQSNEELKPIAAIEKSMIEGKE
CCEEECCCCCEEEEECCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHH
GIGQYKYKGAEKYISYSPMKSTGWSLAIYAPKNEILKEVSEITRNIIIVSTLGIGIALVC
CCCHHHHCCHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCEEEEHHHHHHHHHHH
IWFISTQISNNLISMRDSLNIVATGDLTTNVNSNIEKEKDEIGHMAKALSKTVLSIGSMI
HHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NSLKGSSFNIDDKANNLAAISEEFTATTENVSTAIQEVATGATNQAQALTEIVSMLNDFS
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
DKINSTVNNIEEIDGMSKEIDEKANVSNKDMKELLNSIENLTKVFENFETKIWTMESNVQ
HHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHH
KINEITNLINDIAEKTNLLALNAAIEAARAGESGKGFAVVAEEIRKLAEMSRKSSEDIYN
HHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
IVNGVLEDTKDMVKSSNEVNEKLNGQRSTADEAMNSFMEISKSVTNMIPKIRNINNSANI
HHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IEKNKNEILNKSETIASISQEISASAEEISASSEEMSVSSEEVANTAQSLNEMTQDMLNE
HHCCHHHHHCHHHHHHHHHHHHHCCHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
MNKFKTE
HHHHCCC
>Mature Secondary Structure
MKFKTMKGKMLTYFLSLFLIICIAISFMAYFMSKRMIERKASSLMSEVSRQAVQNIEARL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NGTLDSIETVANMPTIKDPKLGWDKKKTILDEEIKLHGHIKMGIVSKEGQSIQTDGTTVN
CCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEECEEEEEEEECCCCEEECCCCEEE
VKDRPYFKKAMEGKSTISEPIVSKVDGKVVIIYTVPIKNGNIIMGALTAVRAGNDISNIS
ECCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEHHHHHHHCCCCHHHHH
NSIKVGESGGAYLIDSAGTVIAHKNKESVIKRENSIKDAQSNEELKPIAAIEKSMIEGKE
CCEEECCCCCEEEEECCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHH
GIGQYKYKGAEKYISYSPMKSTGWSLAIYAPKNEILKEVSEITRNIIIVSTLGIGIALVC
CCCHHHHCCHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCEEEEHHHHHHHHHHH
IWFISTQISNNLISMRDSLNIVATGDLTTNVNSNIEKEKDEIGHMAKALSKTVLSIGSMI
HHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NSLKGSSFNIDDKANNLAAISEEFTATTENVSTAIQEVATGATNQAQALTEIVSMLNDFS
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
DKINSTVNNIEEIDGMSKEIDEKANVSNKDMKELLNSIENLTKVFENFETKIWTMESNVQ
HHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHH
KINEITNLINDIAEKTNLLALNAAIEAARAGESGKGFAVVAEEIRKLAEMSRKSSEDIYN
HHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
IVNGVLEDTKDMVKSSNEVNEKLNGQRSTADEAMNSFMEISKSVTNMIPKIRNINNSANI
HHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IEKNKNEILNKSETIASISQEISASAEEISASSEEMSVSSEEVANTAQSLNEMTQDMLNE
HHCCHHHHHCHHHHHHHHHHHHHCCHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
MNKFKTE
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA