Click here to switch to the map view.

The map label for this gene is ydaL [H]

Identifier: 226948564

GI number: 226948564

Start: 1509147

End: 1510799

Strand: Direct

Name: ydaL [H]

Synonym: CLM_1456

Alternate gene names: 226948564

Gene position: 1509147-1510799 (Clockwise)

Preceding gene: 226948563

Following gene: 226948565

Centisome position: 36.32

GC content: 25.71

Gene sequence:

>1653_bases
ATGTATAAGAAAATAACTATTTACTTTATGATATTTTTTTTACTATTCACAAATGCAAATTGTAAAGTTAAAGCAGCAGA
TAGTGATAAAAAAGAAAAAGTTTTAATAGTATATGATAGTTTGAATTTTTTTTCATATAACAACAATATAGTATATTCTA
TTAGAGAACTTTTAGAAGCTTTTAATACAGCGGTGAAAGTAGTAAATATAGCTGATTATAAGGAAGGGAAAATAAATAAT
TATGATTATGTGTTTGTAATGGGTATAGAAGGAGAATTAAATAAGAAAACATTCATAAAAGATTTAAAAAATTATAATAA
AAAAATATGCTGGATAGGAGAAGGCATAGATATCTTCTTGCAAAATAATCCTAAATATAGTATGAGATATGTAAATTCTA
ACTTAGACATTACAGAAGCTTATTACTCTAATAAAGAAAATATAAATATTTCTAAGATGGAAAAATTTTATTTAGATTCA
AAGGAAAGTTTTACAGTTTTAAAACCCTATTCTAAAGAAACAAAAATATACGGCTATTTAAGTAATGGAAAAGACTATTT
TCCCTATATAATAAACGAAAAAAATTTATGGCATATAAGTAGAATAGATAATAACTCAGTAATTTTTTATATTTTCTCAG
ATATTTTAAATTATATATTTGAAGTAGATAAATTTAAAGAGGAAAAAGTTTTTATAAGAATAGAGGATGTTCATCCTTTA
ATAGATATAAATAAGCTTAAAGCTATAGCAGACTATTTATATAGTGAAGATATACCATTTATGATAGCTCTCATTCCTAC
TTTTGTCGATACTAAAACCGGTTATGTAAATAGTATGTCAGATCAAAAAAAATTTATTAATACCATAAAATATATGCAGC
AAAAGGGTGGAACAGTAATACTTCATGGGTATACTCACCCAAATAATAAAGAAGAAGCTTCAGGGGAGGAACATGAGTTT
TGGAATGGAAAAGAAAATGCTCTTTTGGAAATGGATATGGGAAAGTATGTGTATGACAAAGTCGGGAAAGGTATTAAAGA
ATGTGTAAAAAATAATATATATCCATTAGGATTTGAAGCCCCTGATTATGATATGGATATGAGAACATATAAGGAATTTA
AAAAGTATTTTTCAACTTGCGTAGGGCAATGCCAAAGTAGTGATAAAAGATTTACAAGTGCAGCCTATCCTTACGTACTA
AAGAACACAGAAACGTTTAATATATTGATTCCTGAAAATTTGGGATATATAGAAAAGGAAAATCCACTATGGTTTAAGAA
AATACAGGAGAACTTTCGTCAGATTTCTATGGTAAGGGGATATACTGCCGGAGTATTTTTTCATTCTTATATAGATATAA
ATTACTTAAAGGAATTAGTTGATTATCTCAAAAGTCAAAATGTTGATTTTTTAGATTTGAAAAAAGAGGAAAATTGGGTT
AAATGGAATGACATAAAAATTTTATCAAGAGATGGTAAGGTAAACATATATCATAAAGAAAGCCAAGAGAATAGTAAACA
AGGCTTTAAGGAGAAAAGATTTGTAGAAAGAGCTAATTTTATAGTTATAATGATAGTTACTGTATTTGTTACTATATTTA
TCATTATGTTTTTTGTATCTAAGAAAAAGGATAAAAATAAATTTTTAAGGTGA

Upstream 100 bases:

>100_bases
AATGTTAATATTGATATAAAAGTAGGAATAGTAGAATATAAAAATACTATAAAAGAAGCTTTTGAGTTTAAAGAATTAGC
AGAAAAGGAATTAGAATACG

Downstream 100 bases:

>100_bases
TAAACATGGAAAGTTTAAATTGGGTAGATTATTTGTTCATTTTTTCTTTAGTTTCAATATGGATGCTGCTGTTTGTAAAT
ATAATTTTATCTTTAGCTGG

Product: STE like transcription factor domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MYKKITIYFMIFFLLFTNANCKVKAADSDKKEKVLIVYDSLNFFSYNNNIVYSIRELLEAFNTAVKVVNIADYKEGKINN
YDYVFVMGIEGELNKKTFIKDLKNYNKKICWIGEGIDIFLQNNPKYSMRYVNSNLDITEAYYSNKENINISKMEKFYLDS
KESFTVLKPYSKETKIYGYLSNGKDYFPYIINEKNLWHISRIDNNSVIFYIFSDILNYIFEVDKFKEEKVFIRIEDVHPL
IDINKLKAIADYLYSEDIPFMIALIPTFVDTKTGYVNSMSDQKKFINTIKYMQQKGGTVILHGYTHPNNKEEASGEEHEF
WNGKENALLEMDMGKYVYDKVGKGIKECVKNNIYPLGFEAPDYDMDMRTYKEFKKYFSTCVGQCQSSDKRFTSAAYPYVL
KNTETFNILIPENLGYIEKENPLWFKKIQENFRQISMVRGYTAGVFFHSYIDINYLKELVDYLKSQNVDFLDLKKEENWV
KWNDIKILSRDGKVNIYHKESQENSKQGFKEKRFVERANFIVIMIVTVFVTIFIIMFFVSKKKDKNKFLR

Sequences:

>Translated_550_residues
MYKKITIYFMIFFLLFTNANCKVKAADSDKKEKVLIVYDSLNFFSYNNNIVYSIRELLEAFNTAVKVVNIADYKEGKINN
YDYVFVMGIEGELNKKTFIKDLKNYNKKICWIGEGIDIFLQNNPKYSMRYVNSNLDITEAYYSNKENINISKMEKFYLDS
KESFTVLKPYSKETKIYGYLSNGKDYFPYIINEKNLWHISRIDNNSVIFYIFSDILNYIFEVDKFKEEKVFIRIEDVHPL
IDINKLKAIADYLYSEDIPFMIALIPTFVDTKTGYVNSMSDQKKFINTIKYMQQKGGTVILHGYTHPNNKEEASGEEHEF
WNGKENALLEMDMGKYVYDKVGKGIKECVKNNIYPLGFEAPDYDMDMRTYKEFKKYFSTCVGQCQSSDKRFTSAAYPYVL
KNTETFNILIPENLGYIEKENPLWFKKIQENFRQISMVRGYTAGVFFHSYIDINYLKELVDYLKSQNVDFLDLKKEENWV
KWNDIKILSRDGKVNIYHKESQENSKQGFKEKRFVERANFIVIMIVTVFVTIFIIMFFVSKKKDKNKFLR
>Mature_550_residues
MYKKITIYFMIFFLLFTNANCKVKAADSDKKEKVLIVYDSLNFFSYNNNIVYSIRELLEAFNTAVKVVNIADYKEGKINN
YDYVFVMGIEGELNKKTFIKDLKNYNKKICWIGEGIDIFLQNNPKYSMRYVNSNLDITEAYYSNKENINISKMEKFYLDS
KESFTVLKPYSKETKIYGYLSNGKDYFPYIINEKNLWHISRIDNNSVIFYIFSDILNYIFEVDKFKEEKVFIRIEDVHPL
IDINKLKAIADYLYSEDIPFMIALIPTFVDTKTGYVNSMSDQKKFINTIKYMQQKGGTVILHGYTHPNNKEEASGEEHEF
WNGKENALLEMDMGKYVYDKVGKGIKECVKNNIYPLGFEAPDYDMDMRTYKEFKKYFSTCVGQCQSSDKRFTSAAYPYVL
KNTETFNILIPENLGYIEKENPLWFKKIQENFRQISMVRGYTAGVFFHSYIDINYLKELVDYLKSQNVDFLDLKKEENWV
KWNDIKILSRDGKVNIYHKESQENSKQGFKEKRFVERANFIVIMIVTVFVTIFIIMFFVSKKKDKNKFLR

Specific function: Unknown

COG id: COG5298

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass type I membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018763 [H]

Pfam domain/function: PF10096 DUF2334 [H]

EC number: NA

Molecular weight: Translated: 65152; Mature: 65152

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKITIYFMIFFLLFTNANCKVKAADSDKKEKVLIVYDSLNFFSYNNNIVYSIRELLEA
CCCEEHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCEEEEECCCCHHHHHHHHHH
FNTAVKVVNIADYKEGKINNYDYVFVMGIEGELNKKTFIKDLKNYNKKICWIGEGIDIFL
HHHHEEEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCEEEEE
QNNPKYSMRYVNSNLDITEAYYSNKENINISKMEKFYLDSKESFTVLKPYSKETKIYGYL
ECCCCEEEEEECCCCCEEHHHHCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCEEEEEE
SNGKDYFPYIINEKNLWHISRIDNNSVIFYIFSDILNYIFEVDKFKEEKVFIRIEDVHPL
CCCCCCCCEEECCCCEEEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCC
IDINKLKAIADYLYSEDIPFMIALIPTFVDTKTGYVNSMSDQKKFINTIKYMQQKGGTVI
CCHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE
LHGYTHPNNKEEASGEEHEFWNGKENALLEMDMGKYVYDKVGKGIKECVKNNIYPLGFEA
EEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEECCCC
PDYDMDMRTYKEFKKYFSTCVGQCQSSDKRFTSAAYPYVLKNTETFNILIPENLGYIEKE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEECCCEEEEEECCCCCCEECC
NPLWFKKIQENFRQISMVRGYTAGVFFHSYIDINYLKELVDYLKSQNVDFLDLKKEENWV
CCHHHHHHHHHHHHHHHHCCCHHHEEHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCE
KWNDIKILSRDGKVNIYHKESQENSKQGFKEKRFVERANFIVIMIVTVFVTIFIIMFFVS
EECCEEEEECCCEEEEEECCCCCCHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KKKDKNKFLR
CCCCHHCCCC
>Mature Secondary Structure
MYKKITIYFMIFFLLFTNANCKVKAADSDKKEKVLIVYDSLNFFSYNNNIVYSIRELLEA
CCCEEHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCEEEEECCCCHHHHHHHHHH
FNTAVKVVNIADYKEGKINNYDYVFVMGIEGELNKKTFIKDLKNYNKKICWIGEGIDIFL
HHHHEEEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCEEEEE
QNNPKYSMRYVNSNLDITEAYYSNKENINISKMEKFYLDSKESFTVLKPYSKETKIYGYL
ECCCCEEEEEECCCCCEEHHHHCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCEEEEEE
SNGKDYFPYIINEKNLWHISRIDNNSVIFYIFSDILNYIFEVDKFKEEKVFIRIEDVHPL
CCCCCCCCEEECCCCEEEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCC
IDINKLKAIADYLYSEDIPFMIALIPTFVDTKTGYVNSMSDQKKFINTIKYMQQKGGTVI
CCHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE
LHGYTHPNNKEEASGEEHEFWNGKENALLEMDMGKYVYDKVGKGIKECVKNNIYPLGFEA
EEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEECCCC
PDYDMDMRTYKEFKKYFSTCVGQCQSSDKRFTSAAYPYVLKNTETFNILIPENLGYIEKE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEECCCEEEEEECCCCCCEECC
NPLWFKKIQENFRQISMVRGYTAGVFFHSYIDINYLKELVDYLKSQNVDFLDLKKEENWV
CCHHHHHHHHHHHHHHHHCCCHHHEEHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCE
KWNDIKILSRDGKVNIYHKESQENSKQGFKEKRFVERANFIVIMIVTVFVTIFIIMFFVS
EECCEEEEECCCEEEEEECCCCCCHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KKKDKNKFLR
CCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]