| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226225109
Identifier: 226225109
GI number: 226225109
Start: 2613812
End: 2614261
Strand: Reverse
Name: 226225109
Synonym: Lm4b_02530
Alternate gene names: NA
Gene position: 2614261-2613812 (Counterclockwise)
Preceding gene: 226225110
Following gene: 226225108
Centisome position: 89.75
GC content: 38.0
Gene sequence:
>450_bases ATGACTGCCAACCAAATGGAACGAAAAAAAGTAACTATTCATATCACCAATGTCATCCGTCAGATGGATGCAGAAGAGAA ATCCGATATGTCTGTTTCGGGTGTTTTTTACCGCGATAAAGGCAATCGTTATCTGCATTATGAGGAAAAACAATTAGCTG GAACAATTCGTACGGTTCTAAAAATTGCTGACAACGAACTACTTTTAATGAGAAGTGGTGCCGTAAATATGAGAATGCAC TTTTTCCGAGATAATAGGAGAAGTACTGCGTCTGTTGATTCCGGAGCAGGGAAATTACAATTAGAATCAGAACTAGTATC AATGGAAGAACTATATGAAAATAAGCCTGATGTACTGAGTGAAGTCGCATTTCAATATGATTTGCTAAGCCACGGCGAAT ACATTGGCTCATATACTGTTTTAATGAAAATAGAGGAGGACGCAGAATGA
Upstream 100 bases:
>100_bases TATTTGGTCTGACATCATTTTAACCTGTTGCTTTTCATGTTATTTTTCACTATAATATAATGCGTCTATTCTTCTGACCG GAAAGGGGTAAATAAGCGAT
Downstream 100 bases:
>100_bases ATGTCATGCAAGAGAACCAAATCAAATTAATTGAACATATCAAACAAGGAGTTGTTCAAGCGGTTGGTTTAGAAGAAGCG GAAGTACCAGAAATTTTACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MTANQMERKKVTIHITNVIRQMDAEEKSDMSVSGVFYRDKGNRYLHYEEKQLAGTIRTVLKIADNELLLMRSGAVNMRMH FFRDNRRSTASVDSGAGKLQLESELVSMEELYENKPDVLSEVAFQYDLLSHGEYIGSYTVLMKIEEDAE
Sequences:
>Translated_149_residues MTANQMERKKVTIHITNVIRQMDAEEKSDMSVSGVFYRDKGNRYLHYEEKQLAGTIRTVLKIADNELLLMRSGAVNMRMH FFRDNRRSTASVDSGAGKLQLESELVSMEELYENKPDVLSEVAFQYDLLSHGEYIGSYTVLMKIEEDAE >Mature_148_residues TANQMERKKVTIHITNVIRQMDAEEKSDMSVSGVFYRDKGNRYLHYEEKQLAGTIRTVLKIADNELLLMRSGAVNMRMHF FRDNRRSTASVDSGAGKLQLESELVSMEELYENKPDVLSEVAFQYDLLSHGEYIGSYTVLMKIEEDAE
Specific function: Unknown
COG id: COG4506
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17148; Mature: 17017
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANQMERKKVTIHITNVIRQMDAEEKSDMSVSGVFYRDKGNRYLHYEEKQLAGTIRTVL CCCCCCCCEEEEEEHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHH KIADNELLLMRSGAVNMRMHFFRDNRRSTASVDSGAGKLQLESELVSMEELYENKPDVLS HHCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCHHHH EVAFQYDLLSHGEYIGSYTVLMKIEEDAE HHHHHHHHHHCCCCCCEEEEEEEECCCCC >Mature Secondary Structure TANQMERKKVTIHITNVIRQMDAEEKSDMSVSGVFYRDKGNRYLHYEEKQLAGTIRTVL CCCCCCCEEEEEEHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHH KIADNELLLMRSGAVNMRMHFFRDNRRSTASVDSGAGKLQLESELVSMEELYENKPDVLS HHCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCHHHH EVAFQYDLLSHGEYIGSYTVLMKIEEDAE HHHHHHHHHHCCCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA