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The map label for this gene is yhbH [C]

Identifier: 226225059

GI number: 226225059

Start: 2562785

End: 2563348

Strand: Reverse

Name: yhbH [C]

Synonym: Lm4b_02480

Alternate gene names: 226225059

Gene position: 2563348-2562785 (Counterclockwise)

Preceding gene: 226225060

Following gene: 226225058

Centisome position: 88.01

GC content: 34.4

Gene sequence:

>564_bases
ATGCTTAAGTACAACATTCGTGGAGAAAATATTGAAGTAACAGAACCGATCCGAGATTATGTTGAAAAGAAAATCGATAA
ATTAGAACGATATTTTACGGAGACTCCAGACGCTAACGTTCATGTTAATTTAAAAGTATATTCCGATAAAAATGCGAAAG
TTGAAGTGACCATTCCGCTCCCAAATCTTGTGCTACGTGCAGAAGAAACAAGTGGAGATTTATATGCTAGCATCGACTTA
ATTGTAGATAAATTAGAAAGACAAATTCGCAAACATAAAACAAAAGTAAACCGCAAGTTCCGTGACAAAGGGGCAGAAAG
AGATTATTTTGCTTATTCTGATGTTAACGGCAGCACACCACCAGAAGAAAATGAAGGAGATTTTGATCTTGAAATTGTAA
GAACAAAACAATTTTCATTAAAACCGATGGATAGTGAAGAAGCTGTTTTACAAATGAATTTGCTGGGTCATAGTTTCTAT
GTTTACACTGATGCGGAAACAAACGGTACCAATATTGTTTATTCTCGTAAAGACGGCAAATATGGTTTGATTGAAACAAA
TTAA

Upstream 100 bases:

>100_bases
GTGCAAATGTTTGCAAAACACATCGTTTTCACGTAGACTAAGGGTAAGAAGAATACTCTTCTTTATCGTTATTTTGTTTT
ATTTCAAAGGAGGAATTGCT

Downstream 100 bases:

>100_bases
TTTAAAATAATAATTAACAGATGGGGGCCAATCTTGGTCTCCATTTTTTTACTCTTAGATGAAGAATTTATGGCATTTTG
ATAATTTTATTGATTAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MLKYNIRGENIEVTEPIRDYVEKKIDKLERYFTETPDANVHVNLKVYSDKNAKVEVTIPLPNLVLRAEETSGDLYASIDL
IVDKLERQIRKHKTKVNRKFRDKGAERDYFAYSDVNGSTPPEENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFY
VYTDAETNGTNIVYSRKDGKYGLIETN

Sequences:

>Translated_187_residues
MLKYNIRGENIEVTEPIRDYVEKKIDKLERYFTETPDANVHVNLKVYSDKNAKVEVTIPLPNLVLRAEETSGDLYASIDL
IVDKLERQIRKHKTKVNRKFRDKGAERDYFAYSDVNGSTPPEENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFY
VYTDAETNGTNIVYSRKDGKYGLIETN
>Mature_187_residues
MLKYNIRGENIEVTEPIRDYVEKKIDKLERYFTETPDANVHVNLKVYSDKNAKVEVTIPLPNLVLRAEETSGDLYASIDL
IVDKLERQIRKHKTKVNRKFRDKGAERDYFAYSDVNGSTPPEENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFY
VYTDAETNGTNIVYSRKDGKYGLIETN

Specific function: Probably Modulates The Activity Of Sigma(54) (Rpon). [C]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=97, Percent_Identity=37.1134020618557, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 21634; Mature: 21634

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKYNIRGENIEVTEPIRDYVEKKIDKLERYFTETPDANVHVNLKVYSDKNAKVEVTIPL
CEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEECC
PNLVLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRDKGAERDYFAYSDVNGSTP
CCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
PEENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVYSRKDGK
CCCCCCCEEEEEEEECCEECCCCCCCHHEEEEEECCCEEEEEECCCCCCCEEEEECCCCC
YGLIETN
EEEEECC
>Mature Secondary Structure
MLKYNIRGENIEVTEPIRDYVEKKIDKLERYFTETPDANVHVNLKVYSDKNAKVEVTIPL
CEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEECC
PNLVLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRDKGAERDYFAYSDVNGSTP
CCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
PEENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVYSRKDGK
CCCCCCCEEEEEEEECCEECCCCCCCHHEEEEEECCCEEEEEECCCCCCCEEEEECCCCC
YGLIETN
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA