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The map label for this gene is comFC

Identifier: 226225060

GI number: 226225060

Start: 2563543

End: 2564199

Strand: Reverse

Name: comFC

Synonym: Lm4b_02481

Alternate gene names: 226225060

Gene position: 2564199-2563543 (Counterclockwise)

Preceding gene: 226225061

Following gene: 226225059

Centisome position: 88.04

GC content: 34.7

Gene sequence:

>657_bases
ATGACTAATTGCTTACTTTGTTTTCAACCAGTTAGGCAAAGCGCCAGTTGGGAAATAAGTTGGTTATTTGAACCTTTGCC
AATTTGTTGTGATGCATGCTTAGCGGGATTTGAAAAACTAACTGGCTTACTATGTAAAAATTGTAGTAAAGAATCCTTAG
ATGATGTCTGCGAGGATTGCCGAAGTAGAACACATTTTTTAGATAGTAATAAATCCATTTATCGTTACAATGATTTCGCC
AAAGAATATATGAAGAAGTTTAAATTTCAAGGGGATTATGAAATAGGGGCTATTTTCAAAAAGGAATTAAGGAACTTTCT
ATCAGAAAAGAAAGAGAAGATTGTACCAATTCCAGTAAGCGAGATGCGGAAAGTAGAACGTGGATTTAATCAAACAACCG
CGATATTAAAACAATCTGGCATCCTATATGAAGAGCTTTTAGCCAAAAAGCATACAGAAAAGCAATCTAAAAAAACAAAG
AGGGAACGATTAGCATCTGAACAAACATTTTACTTTTCTGGAAAAGAAATTTATGAGTCAACAGAAGTAATATTATTTGA
TGATATTTACACCACAGGAAGCACACTTAACCTAGCAGCGCAAATCTTAAAAGAAGCCGGAGTGTACAAGGTGAGTGCGC
TAACGATATTCAGATAG

Upstream 100 bases:

>100_bases
GACGTTTGCTTTTTTCATTACGGTAAAACAATAGAAATGAAGCAAGCTATCTCCCACATTCAAAAAATGAATCAACAAGG
AGTGATAGAAGGGATGCTAG

Downstream 100 bases:

>100_bases
ATGATATTTATCTTCTAAAAGAGGTTTGCGGAAGCGGTATTAGTGGAATAAAATACTAAATAAAGATAAGTGAATGTAAG
CTTCTTAGCTCTTTGTGCAA

Product: late competence protein comFC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTNCLLCFQPVRQSASWEISWLFEPLPICCDACLAGFEKLTGLLCKNCSKESLDDVCEDCRSRTHFLDSNKSIYRYNDFA
KEYMKKFKFQGDYEIGAIFKKELRNFLSEKKEKIVPIPVSEMRKVERGFNQTTAILKQSGILYEELLAKKHTEKQSKKTK
RERLASEQTFYFSGKEIYESTEVILFDDIYTTGSTLNLAAQILKEAGVYKVSALTIFR

Sequences:

>Translated_218_residues
MTNCLLCFQPVRQSASWEISWLFEPLPICCDACLAGFEKLTGLLCKNCSKESLDDVCEDCRSRTHFLDSNKSIYRYNDFA
KEYMKKFKFQGDYEIGAIFKKELRNFLSEKKEKIVPIPVSEMRKVERGFNQTTAILKQSGILYEELLAKKHTEKQSKKTK
RERLASEQTFYFSGKEIYESTEVILFDDIYTTGSTLNLAAQILKEAGVYKVSALTIFR
>Mature_217_residues
TNCLLCFQPVRQSASWEISWLFEPLPICCDACLAGFEKLTGLLCKNCSKESLDDVCEDCRSRTHFLDSNKSIYRYNDFAK
EYMKKFKFQGDYEIGAIFKKELRNFLSEKKEKIVPIPVSEMRKVERGFNQTTAILKQSGILYEELLAKKHTEKQSKKTKR
ERLASEQTFYFSGKEIYESTEVILFDDIYTTGSTLNLAAQILKEAGVYKVSALTIFR

Specific function: Involved in transformation (competence for DNA uptake) [H]

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005222
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 25238; Mature: 25107

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNCLLCFQPVRQSASWEISWLFEPLPICCDACLAGFEKLTGLLCKNCSKESLDDVCEDC
CCCCCEEEHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RSRTHFLDSNKSIYRYNDFAKEYMKKFKFQGDYEIGAIFKKELRNFLSEKKEKIVPIPVS
HHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
EMRKVERGFNQTTAILKQSGILYEELLAKKHTEKQSKKTKRERLASEQTFYFSGKEIYES
HHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHCC
TEVILFDDIYTTGSTLNLAAQILKEAGVYKVSALTIFR
CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEHEEEECC
>Mature Secondary Structure 
TNCLLCFQPVRQSASWEISWLFEPLPICCDACLAGFEKLTGLLCKNCSKESLDDVCEDC
CCCCEEEHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RSRTHFLDSNKSIYRYNDFAKEYMKKFKFQGDYEIGAIFKKELRNFLSEKKEKIVPIPVS
HHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
EMRKVERGFNQTTAILKQSGILYEELLAKKHTEKQSKKTKRERLASEQTFYFSGKEIYES
HHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHCC
TEVILFDDIYTTGSTLNLAAQILKEAGVYKVSALTIFR
CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 8045879; 9384377 [H]