| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is pgcA [H]
Identifier: 226225023
GI number: 226225023
Start: 2522199
End: 2523929
Strand: Reverse
Name: pgcA [H]
Synonym: Lm4b_02444
Alternate gene names: 226225023
Gene position: 2523929-2522199 (Counterclockwise)
Preceding gene: 226225024
Following gene: 226225022
Centisome position: 86.65
GC content: 39.86
Gene sequence:
>1731_bases ATGAATTGGCAAGAAGAATATCAAAAATGGGTTGCTAATGACAAATTAGATAGCACATTAAGAAAACAATTAACGAATAT GGAAGCAAATGAAAAAGAACTTGAGGATAGTTTTTATCGTAATATGGAATTTGGAACGGCTGGGATGCGTGGTGTACTAG GCGCTGGAACAAACCGCATGAATATCTATACTATTCGTAAGGCTTCTCTAGGTTTGGCGCAATTTGTGGCGGAGAACGGT GACGAGGCTAAGAAGCGCGGAATAGTAATTGCGTATGACCCTCGTCATATGTCACGCGAATTTGCTTTTGAATCGGCGGC GGTATTAGGGCATCATGGTGTGAAAAGCTATGTTTTTGATGCGCTTCGACCAACACCGGAACTTTCCTTTGCAGTACGTC ATTTAAATGCGTTTGGTGGGATTGTTATTACAGCTAGCCATAACCCACCAGAATACAATGGCTACAAGATTTATGGTGAA GATGGCGGACAAATGCCTCCAACAGGGGCAAGTGCTGTAATTGAATACATAAACGCGGTAGAGGATATTTTTTCTGTAGA AGTAGCGAACCAAGAGCTATTAATTGAAAATGGTTTACTTGAGGTAATCAGTGAAAAAGTAGACCGTCCATATTTGGAAA AATTAAAAGAGGTTATTGTCAATAAAGAGCTTGTTCAAGAACGAGGGGAGGATTTGAAAATTGTTTTCACGCCCCTTCAT GGTACTGGCGGAATTCTTGGCGTTCCTGCGCTTGAAAGTGTTGGCTTTACGAATATTGTTAAGGTTGACGAGCAATTTGT GAATGATCCCGATTTTGGAACGGTAAAATCGCCTAACCCGGAAAACCGCGAAGCCTTTTTACTTGCGATTGAATATGGTA AGAAGTTTGGTGGCGACATTTTAGTCGGAACAGATCCGGATGCTGACCGTTTAGGTGTGGCAGTTCGTAATCTTGACGGC GAATATGAAGTGTTATCTGGAAACCAGATTGGCGCGATTATTTTACATTATTTATTAAAACAAAAGAAAGCGCAAAATGA ATTGCCAGCTAATGCAGCGGTATTAAAATCTATTGTAACAAGTAATCTTGGAACAGAAATCGCGAAACATTACGGTGCGG AAATGATTGAAGTATTAACTGGTTTCAAATTTATTGCAGAACAAATTAAGCACTTTGAAGAAACTGGCAAGCATACGTTT GAATTTGGTTATGAAGAAAGTAATGGTTATATGGTTAAGCCGTTTACGCGTGATAAAGATGCGATTCAAGCGGTGCTTGC GATTGCGGAAGTGGCGCTCGTTAGCAAAGTAGAAGGTGGAAGTTTACTAGAAGATTTAGAGCAAATTTATGCTGAGTTTG GCTATTACAAAGAAGATCTAGTTTCCTTAACTTTAAGCGGTAAGGATGGTTCTCGGCGCATCAAAGAAATTACAAGTAAT TTTCGCGAGCAACTACCAACAAGTATGGGTGGATTCCCCGTGGAACGTGCGGAAGATTATTTAAGAAGCGAAACAACTTG GATTGCTACCGGAAAAACGGAAGCGATTCATTTGCCAACAGCAGATGTCATTAAATGTTATTTTGAAGATGGTTCATGGT TCTGTTTACGTCCATCCGGCACAGAACCGAAAATCAAATTCTACTTTAGTATTCGTGGTGAAAGTAAAGAAGAAAGTGCA ACAAAATTAGAAAAAGTGAAAGCTGATTTGATGCAACATATCGAAGCTTAA
Upstream 100 bases:
>100_bases TTCGACCAGAAAAACCTTTTACATCTAGAACAGCTTTTCGTTTCACAGTGGAGAGCTGATAAATTTTAATTAAAGAGTTC TAAATGAAGGAGTGTAGAGA
Downstream 100 bases:
>100_bases AAAGAAAAATCCCGGAAACTCGCTTTAGAGACTTTTCCGGGATTTTCTAGTGAGAAGTGTGCTAAAATGGAAGATAGATA TTATTTGTGCGAAAGGATGA
Product: phosphomannomutase and phosphoglucomutase
Products: NA
Alternate protein names: PGM; Alpha-phosphoglucomutase; Glucose phosphomutase [H]
Number of amino acids: Translated: 576; Mature: 576
Protein sequence:
>576_residues MNWQEEYQKWVANDKLDSTLRKQLTNMEANEKELEDSFYRNMEFGTAGMRGVLGAGTNRMNIYTIRKASLGLAQFVAENG DEAKKRGIVIAYDPRHMSREFAFESAAVLGHHGVKSYVFDALRPTPELSFAVRHLNAFGGIVITASHNPPEYNGYKIYGE DGGQMPPTGASAVIEYINAVEDIFSVEVANQELLIENGLLEVISEKVDRPYLEKLKEVIVNKELVQERGEDLKIVFTPLH GTGGILGVPALESVGFTNIVKVDEQFVNDPDFGTVKSPNPENREAFLLAIEYGKKFGGDILVGTDPDADRLGVAVRNLDG EYEVLSGNQIGAIILHYLLKQKKAQNELPANAAVLKSIVTSNLGTEIAKHYGAEMIEVLTGFKFIAEQIKHFEETGKHTF EFGYEESNGYMVKPFTRDKDAIQAVLAIAEVALVSKVEGGSLLEDLEQIYAEFGYYKEDLVSLTLSGKDGSRRIKEITSN FREQLPTSMGGFPVERAEDYLRSETTWIATGKTEAIHLPTADVIKCYFEDGSWFCLRPSGTEPKIKFYFSIRGESKEESA TKLEKVKADLMQHIEA
Sequences:
>Translated_576_residues MNWQEEYQKWVANDKLDSTLRKQLTNMEANEKELEDSFYRNMEFGTAGMRGVLGAGTNRMNIYTIRKASLGLAQFVAENG DEAKKRGIVIAYDPRHMSREFAFESAAVLGHHGVKSYVFDALRPTPELSFAVRHLNAFGGIVITASHNPPEYNGYKIYGE DGGQMPPTGASAVIEYINAVEDIFSVEVANQELLIENGLLEVISEKVDRPYLEKLKEVIVNKELVQERGEDLKIVFTPLH GTGGILGVPALESVGFTNIVKVDEQFVNDPDFGTVKSPNPENREAFLLAIEYGKKFGGDILVGTDPDADRLGVAVRNLDG EYEVLSGNQIGAIILHYLLKQKKAQNELPANAAVLKSIVTSNLGTEIAKHYGAEMIEVLTGFKFIAEQIKHFEETGKHTF EFGYEESNGYMVKPFTRDKDAIQAVLAIAEVALVSKVEGGSLLEDLEQIYAEFGYYKEDLVSLTLSGKDGSRRIKEITSN FREQLPTSMGGFPVERAEDYLRSETTWIATGKTEAIHLPTADVIKCYFEDGSWFCLRPSGTEPKIKFYFSIRGESKEESA TKLEKVKADLMQHIEA >Mature_576_residues MNWQEEYQKWVANDKLDSTLRKQLTNMEANEKELEDSFYRNMEFGTAGMRGVLGAGTNRMNIYTIRKASLGLAQFVAENG DEAKKRGIVIAYDPRHMSREFAFESAAVLGHHGVKSYVFDALRPTPELSFAVRHLNAFGGIVITASHNPPEYNGYKIYGE DGGQMPPTGASAVIEYINAVEDIFSVEVANQELLIENGLLEVISEKVDRPYLEKLKEVIVNKELVQERGEDLKIVFTPLH GTGGILGVPALESVGFTNIVKVDEQFVNDPDFGTVKSPNPENREAFLLAIEYGKKFGGDILVGTDPDADRLGVAVRNLDG EYEVLSGNQIGAIILHYLLKQKKAQNELPANAAVLKSIVTSNLGTEIAKHYGAEMIEVLTGFKFIAEQIKHFEETGKHTF EFGYEESNGYMVKPFTRDKDAIQAVLAIAEVALVSKVEGGSLLEDLEQIYAEFGYYKEDLVSLTLSGKDGSRRIKEITSN FREQLPTSMGGFPVERAEDYLRSETTWIATGKTEAIHLPTADVIKCYFEDGSWFCLRPSGTEPKIKFYFSIRGESKEESA TKLEKVKADLMQHIEA
Specific function: Catalyzes the interconversion between glucose-6- phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=589, Percent_Identity=32.597623089983, Blast_Score=275, Evalue=8e-74, Organism=Homo sapiens, GI31377548, Length=573, Percent_Identity=31.413612565445, Blast_Score=252, Evalue=7e-67, Organism=Escherichia coli, GI1786904, Length=567, Percent_Identity=25.5731922398589, Blast_Score=97, Evalue=4e-21, Organism=Caenorhabditis elegans, GI71993870, Length=553, Percent_Identity=31.1030741410488, Blast_Score=217, Evalue=2e-56, Organism=Caenorhabditis elegans, GI71993878, Length=312, Percent_Identity=32.3717948717949, Blast_Score=138, Evalue=7e-33, Organism=Saccharomyces cerevisiae, GI6323934, Length=605, Percent_Identity=30.9090909090909, Blast_Score=204, Evalue=3e-53, Organism=Drosophila melanogaster, GI20129809, Length=593, Percent_Identity=30.6913996627319, Blast_Score=244, Evalue=8e-65, Organism=Drosophila melanogaster, GI24651977, Length=460, Percent_Identity=31.7391304347826, Blast_Score=224, Evalue=2e-58, Organism=Drosophila melanogaster, GI24653722, Length=577, Percent_Identity=28.42287694974, Blast_Score=207, Evalue=1e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 64120; Mature: 64120
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWQEEYQKWVANDKLDSTLRKQLTNMEANEKELEDSFYRNMEFGTAGMRGVLGAGTNRM CCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCE NIYTIRKASLGLAQFVAENGDEAKKRGIVIAYDPRHMSREFAFESAAVLGHHGVKSYVFD EEEEEECHHHHHHHHHHCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHH ALRPTPELSFAVRHLNAFGGIVITASHNPPEYNGYKIYGEDGGQMPPTGASAVIEYINAV HHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHH EDIFSVEVANQELLIENGLLEVISEKVDRPYLEKLKEVIVNKELVQERGEDLKIVFTPLH HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHCCCCEEEEEEECC GTGGILGVPALESVGFTNIVKVDEQFVNDPDFGTVKSPNPENREAFLLAIEYGKKFGGDI CCCCEECCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCE LVGTDPDADRLGVAVRNLDGEYEVLSGNQIGAIILHYLLKQKKAQNELPANAAVLKSIVT EECCCCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH SNLGTEIAKHYGAEMIEVLTGFKFIAEQIKHFEETGKHTFEFGYEESNGYMVKPFTRDKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECEECCCCEEEECCCCCHH AIQAVLAIAEVALVSKVEGGSLLEDLEQIYAEFGYYKEDLVSLTLSGKDGSRRIKEITSN HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHEEEEEECCCCHHHHHHHHHHH FREQLPTSMGGFPVERAEDYLRSETTWIATGKTEAIHLPTADVIKCYFEDGSWFCLRPSG HHHHCCHHCCCCCHHHHHHHHHCCCEEEECCCCCEEECCCHHHEEEEEECCCEEEECCCC TEPKIKFYFSIRGESKEESATKLEKVKADLMQHIEA CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNWQEEYQKWVANDKLDSTLRKQLTNMEANEKELEDSFYRNMEFGTAGMRGVLGAGTNRM CCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCE NIYTIRKASLGLAQFVAENGDEAKKRGIVIAYDPRHMSREFAFESAAVLGHHGVKSYVFD EEEEEECHHHHHHHHHHCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHH ALRPTPELSFAVRHLNAFGGIVITASHNPPEYNGYKIYGEDGGQMPPTGASAVIEYINAV HHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHH EDIFSVEVANQELLIENGLLEVISEKVDRPYLEKLKEVIVNKELVQERGEDLKIVFTPLH HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHCCCCEEEEEEECC GTGGILGVPALESVGFTNIVKVDEQFVNDPDFGTVKSPNPENREAFLLAIEYGKKFGGDI CCCCEECCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCE LVGTDPDADRLGVAVRNLDGEYEVLSGNQIGAIILHYLLKQKKAQNELPANAAVLKSIVT EECCCCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH SNLGTEIAKHYGAEMIEVLTGFKFIAEQIKHFEETGKHTFEFGYEESNGYMVKPFTRDKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECEECCCCEEEECCCCCHH AIQAVLAIAEVALVSKVEGGSLLEDLEQIYAEFGYYKEDLVSLTLSGKDGSRRIKEITSN HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHEEEEEECCCCHHHHHHHHHHH FREQLPTSMGGFPVERAEDYLRSETTWIATGKTEAIHLPTADVIKCYFEDGSWFCLRPSG HHHHCCHHCCCCCHHHHHHHHHCCCEEEECCCCCEEECCCHHHEEEEEECCCEEEECCCC TEPKIKFYFSIRGESKEESATKLEKVKADLMQHIEA CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 2127799 [H]