Click here to switch to the map view.

The map label for this gene is yhbJ [C]

Identifier: 226225022

GI number: 226225022

Start: 2521216

End: 2522091

Strand: Reverse

Name: yhbJ [C]

Synonym: Lm4b_02443

Alternate gene names: 226225022

Gene position: 2522091-2521216 (Counterclockwise)

Preceding gene: 226225023

Following gene: 226225021

Centisome position: 86.59

GC content: 39.27

Gene sequence:

>876_bases
ATGGCTTCTAAACAATTAAAATTAGTAATCATTACTGGGATGTCTGGAGCAGGAAAAACAGTCGCAATGCAGTCTTTAGA
AGATCTCGGTTATTTTTGTGTAGATAATTTACCGCCAAGTTTACTTCCAAAGTTCTGGGAGCTAATGAAAGAAAGCGATA
AAATGGATAAAATCGCGCTCGTAATGGATCTTCGCGGCCGTGAGTTTTTCGATTCCATTGAACCAGCGCTAGATGAGCTA
GATAATACCAATTTTATAACAACGAAAATCCTCTTTTTAGAGGCTGATGATAAGGTACTTGTTTCGCGTTATAAAGAAAC
GCGCCGCCACCATCCACTGGAGCCTAATGGGTCTGTGCTAGACGGGATTAATGCAGAGCGCGAACTGCTTAGTGATTTAA
AAGGCCGTTCGCAGTTAGTTATTAATACATCGAATATGGCGCCACGTGAGTTACGCGAGCGAATTAACAATGAATTCCAA
ACCGAAGATAAAGATATATTCAATGTGCAATTGATGTCATTTGGTTTCAAATACGGCATTCCGATTGATGCTGATTTAGT
GTTTGATGTGCGCTTTTTACCGAATCCGCATTACATTGACAAAATGCGTCCGTTGACAGGACTTGATGAAGATGTGTATG
AATATGTGATGAAATGGCCAGAAACGCAGACCTTTTTAGATAAGTTAGTAGATCTATTAATGTTTACACTTCCTTTTTAC
AAACGAGAAGGAAAAACACAATTAGTTATTGCCATTGGATGTACTGGAGGACAGCATCGTTCAGTAGCTTTGACAGAGTT
CGTTGGTAAGGCAATTCAACAAAAATATGAAACAACGATTTCACACCGAGATATGAAACGTAGAAAGGGCCGTTAA

Upstream 100 bases:

>100_bases
AATCCCGGAAACTCGCTTTAGAGACTTTTCCGGGATTTTCTAGTGAGAAGTGTGCTAAAATGGAAGATAGATATTATTTG
TGCGAAAGGATGAGGCAGAT

Downstream 100 bases:

>100_bases
TATGAAAAAGGAAATGAAACCTAAAGTAGTAGTAATCGGTGGCGGGACCGGTCTTCCAGTCATTTTAAAAGGGCTTAAAA
AGAAGGATATTCATTTAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MASKQLKLVIITGMSGAGKTVAMQSLEDLGYFCVDNLPPSLLPKFWELMKESDKMDKIALVMDLRGREFFDSIEPALDEL
DNTNFITTKILFLEADDKVLVSRYKETRRHHPLEPNGSVLDGINAERELLSDLKGRSQLVINTSNMAPRELRERINNEFQ
TEDKDIFNVQLMSFGFKYGIPIDADLVFDVRFLPNPHYIDKMRPLTGLDEDVYEYVMKWPETQTFLDKLVDLLMFTLPFY
KREGKTQLVIAIGCTGGQHRSVALTEFVGKAIQQKYETTISHRDMKRRKGR

Sequences:

>Translated_291_residues
MASKQLKLVIITGMSGAGKTVAMQSLEDLGYFCVDNLPPSLLPKFWELMKESDKMDKIALVMDLRGREFFDSIEPALDEL
DNTNFITTKILFLEADDKVLVSRYKETRRHHPLEPNGSVLDGINAERELLSDLKGRSQLVINTSNMAPRELRERINNEFQ
TEDKDIFNVQLMSFGFKYGIPIDADLVFDVRFLPNPHYIDKMRPLTGLDEDVYEYVMKWPETQTFLDKLVDLLMFTLPFY
KREGKTQLVIAIGCTGGQHRSVALTEFVGKAIQQKYETTISHRDMKRRKGR
>Mature_290_residues
ASKQLKLVIITGMSGAGKTVAMQSLEDLGYFCVDNLPPSLLPKFWELMKESDKMDKIALVMDLRGREFFDSIEPALDELD
NTNFITTKILFLEADDKVLVSRYKETRRHHPLEPNGSVLDGINAERELLSDLKGRSQLVINTSNMAPRELRERINNEFQT
EDKDIFNVQLMSFGFKYGIPIDADLVFDVRFLPNPHYIDKMRPLTGLDEDVYEYVMKWPETQTFLDKLVDLLMFTLPFYK
REGKTQLVIAIGCTGGQHRSVALTEFVGKAIQQKYETTISHRDMKRRKGR

Specific function: Displays ATPase and GTPase activities [H]

COG id: COG1660

COG function: function code R; Predicted P-loop-containing kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0042 family [H]

Homologues:

Organism=Escherichia coli, GI1789598, Length=285, Percent_Identity=39.6491228070175, Blast_Score=208, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005337 [H]

Pfam domain/function: PF03668 ATP_bind_2 [H]

EC number: NA

Molecular weight: Translated: 33523; Mature: 33392

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKQLKLVIITGMSGAGKTVAMQSLEDLGYFCVDNLPPSLLPKFWELMKESDKMDKIAL
CCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHCCCHHHEEE
VMDLRGREFFDSIEPALDELDNTNFITTKILFLEADDKVLVSRYKETRRHHPLEPNGSVL
EEECCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEE
DGINAERELLSDLKGRSQLVINTSNMAPRELRERINNEFQTEDKDIFNVQLMSFGFKYGI
CCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCHHEEEEHHHHCCCCCC
PIDADLVFDVRFLPNPHYIDKMRPLTGLDEDVYEYVMKWPETQTFLDKLVDLLMFTLPFY
CCCCCEEEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
KREGKTQLVIAIGCTGGQHRSVALTEFVGKAIQQKYETTISHRDMKRRKGR
HCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASKQLKLVIITGMSGAGKTVAMQSLEDLGYFCVDNLPPSLLPKFWELMKESDKMDKIAL
CCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHCCCHHHEEE
VMDLRGREFFDSIEPALDELDNTNFITTKILFLEADDKVLVSRYKETRRHHPLEPNGSVL
EEECCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEE
DGINAERELLSDLKGRSQLVINTSNMAPRELRERINNEFQTEDKDIFNVQLMSFGFKYGI
CCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCHHEEEEHHHHCCCCCC
PIDADLVFDVRFLPNPHYIDKMRPLTGLDEDVYEYVMKWPETQTFLDKLVDLLMFTLPFY
CCCCCEEEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
KREGKTQLVIAIGCTGGQHRSVALTEFVGKAIQQKYETTISHRDMKRRKGR
HCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA