Click here to switch to the map view.

The map label for this gene is 226224958

Identifier: 226224958

GI number: 226224958

Start: 2452737

End: 2453051

Strand: Reverse

Name: 226224958

Synonym: Lm4b_02379

Alternate gene names: NA

Gene position: 2453051-2452737 (Counterclockwise)

Preceding gene: 226224959

Following gene: 226224957

Centisome position: 84.22

GC content: 32.7

Gene sequence:

>315_bases
ATGACAGAAATTAAATATTTAGAGGGAATGTATCAAGATCCATTCTTTCCACCGTTTCTAGTAGATAAAATTAAGCAATG
TATTTTCGATACGGTTCAATTTTTAGAACAAGGGAATCATGATACAGAAGCGATTCAAGCTAAATTTGATGAAATGACAT
TAGCAATTAATGCATTGCAAGATGAGTTTTATGAAAATGAGAGCGAATTAGAAACAGGAGCAAGGGATTCCATTGCTGAA
ACAATTATCCCGATTTTAGCTCATTATAAGATAGATATCGATATTGAAGAATTACTTAGAGAGCGCGAGTGGTAA

Upstream 100 bases:

>100_bases
TTTTGATGAAATCCAAAAATAGCAGGGAATAAATCTGGCTTGTATTTTTATAAATGAAGTGATATATTGGTTCCAACAAT
TTAGCAAAGGACTGATAATT

Downstream 100 bases:

>100_bases
TATATGATAAAGACTTCAACTGCTAGACAGTTGAAGTCTTTGTTTTGTTTCGAAGTAAAAGCGAGGACCAAATTAAAGGC
TTCTCCCTCCTTTTTGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MTEIKYLEGMYQDPFFPPFLVDKIKQCIFDTVQFLEQGNHDTEAIQAKFDEMTLAINALQDEFYENESELETGARDSIAE
TIIPILAHYKIDIDIEELLREREW

Sequences:

>Translated_104_residues
MTEIKYLEGMYQDPFFPPFLVDKIKQCIFDTVQFLEQGNHDTEAIQAKFDEMTLAINALQDEFYENESELETGARDSIAE
TIIPILAHYKIDIDIEELLREREW
>Mature_103_residues
TEIKYLEGMYQDPFFPPFLVDKIKQCIFDTVQFLEQGNHDTEAIQAKFDEMTLAINALQDEFYENESELETGARDSIAET
IIPILAHYKIDIDIEELLREREW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12264; Mature: 12133

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIKYLEGMYQDPFFPPFLVDKIKQCIFDTVQFLEQGNHDTEAIQAKFDEMTLAINALQ
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
DEFYENESELETGARDSIAETIIPILAHYKIDIDIEELLREREW
HHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
>Mature Secondary Structure 
TEIKYLEGMYQDPFFPPFLVDKIKQCIFDTVQFLEQGNHDTEAIQAKFDEMTLAINALQ
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
DEFYENESELETGARDSIAETIIPILAHYKIDIDIEELLREREW
HHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA