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The map label for this gene is yunF [H]

Identifier: 226224957

GI number: 226224957

Start: 2451753

End: 2452595

Strand: Reverse

Name: yunF [H]

Synonym: Lm4b_02378

Alternate gene names: 226224957

Gene position: 2452595-2451753 (Counterclockwise)

Preceding gene: 226224958

Following gene: 226224954

Centisome position: 84.2

GC content: 40.93

Gene sequence:

>843_bases
ATGGTAACAATCGGGTTAACTGGGTGGAGTGATCATGATTCTTTATTACAAACAAAAAAATTAACATTGGCTGATTATGT
GGCACATTTTCCTGTGGTGGAGGTTGATACGAGTTTTTATGCGATTCCTTCTCCGCGAACAACGGCAAACTGGGCGGCGC
AAACTCCGGATGAATTTCGTTTTGTGATTAAAGCATTTTCGGCGATGACGAAACATAAGGAATGGTCGCAGTATTTTGAT
AGTGAAAATGCGATGTATACGGCTTATATGGATATGATTGCACCGATAAGTGAAACGGGAAAACTACAGGCAATTTTATT
TCAATTTCCTCCGTATTTTAATTGTACGAAAGAAAATGTGACTTATTTAAAATATATTGCATCAAAAATGGGCGATTTGC
CAGTGGCGATTGAATTTCGCCATAATTCTTGGTATAACGAGCAAAATACCGAAAAGACGCTGGAGTTGCTGCGAGAATTA
GGTTTTATTCATACGGTCGTTGATGAACCGCAAGTTGGTTCTGGGAGCGTGCCGATTGTGCTTCGTGAGACGAATAGTGA
TATGACATTAGTGCGGCTTCACGGCCGGAATCAGTATGGTTGGATGAAAGCTAACAGTCCCGAGTGGCGCGAGGTTCGCA
CGCTATACCGTTACAATGAAGAGGAAATTAACGAATGGGCAAAATATGTGGAACATTTACAAAAATTGTCCAAAGAAGTT
GTCGTGATTTTTAATAATAACAGCGGCGGGGATGCGGCTGATAATGCGAAACATTTACAAAAGGCGCTCCAAGTGGAGTT
TCAAGGTTTAGCTCCGATGCAAATGGATTTGTTTTCAGAATAA

Upstream 100 bases:

>100_bases
GTTTTGTTTCGAAGTAAAAGCGAGGACCAAATTAAAGGCTTCTCCCTCCTTTTTGCGTTATAATAAACATAAATCATAAC
GATAGAGAGGGTGGCAGTTG

Downstream 100 bases:

>100_bases
AAAAAGATGGCGCATCGCTAGCGCCATCTTTTTTATGCTTTTATACCAATTAAAAAGCTAATAACTAAAATAATTAATAC
AATCCCAGTTATCCCAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MVTIGLTGWSDHDSLLQTKKLTLADYVAHFPVVEVDTSFYAIPSPRTTANWAAQTPDEFRFVIKAFSAMTKHKEWSQYFD
SENAMYTAYMDMIAPISETGKLQAILFQFPPYFNCTKENVTYLKYIASKMGDLPVAIEFRHNSWYNEQNTEKTLELLREL
GFIHTVVDEPQVGSGSVPIVLRETNSDMTLVRLHGRNQYGWMKANSPEWREVRTLYRYNEEEINEWAKYVEHLQKLSKEV
VVIFNNNSGGDAADNAKHLQKALQVEFQGLAPMQMDLFSE

Sequences:

>Translated_280_residues
MVTIGLTGWSDHDSLLQTKKLTLADYVAHFPVVEVDTSFYAIPSPRTTANWAAQTPDEFRFVIKAFSAMTKHKEWSQYFD
SENAMYTAYMDMIAPISETGKLQAILFQFPPYFNCTKENVTYLKYIASKMGDLPVAIEFRHNSWYNEQNTEKTLELLREL
GFIHTVVDEPQVGSGSVPIVLRETNSDMTLVRLHGRNQYGWMKANSPEWREVRTLYRYNEEEINEWAKYVEHLQKLSKEV
VVIFNNNSGGDAADNAKHLQKALQVEFQGLAPMQMDLFSE
>Mature_280_residues
MVTIGLTGWSDHDSLLQTKKLTLADYVAHFPVVEVDTSFYAIPSPRTTANWAAQTPDEFRFVIKAFSAMTKHKEWSQYFD
SENAMYTAYMDMIAPISETGKLQAILFQFPPYFNCTKENVTYLKYIASKMGDLPVAIEFRHNSWYNEQNTEKTLELLREL
GFIHTVVDEPQVGSGSVPIVLRETNSDMTLVRLHGRNQYGWMKANSPEWREVRTLYRYNEEEINEWAKYVEHLQKLSKEV
VVIFNNNSGGDAADNAKHLQKALQVEFQGLAPMQMDLFSE

Specific function: Unknown

COG id: COG1801

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0759 family [H]

Homologues:

Organism=Escherichia coli, GI1788175, Length=169, Percent_Identity=28.4023668639053, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002763 [H]

Pfam domain/function: PF01904 DUF72 [H]

EC number: NA

Molecular weight: Translated: 32273; Mature: 32273

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTIGLTGWSDHDSLLQTKKLTLADYVAHFPVVEVDTSFYAIPSPRTTANWAAQTPDEFR
CEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCEEECCCCCCCCCCCCCCHHHHH
FVIKAFSAMTKHKEWSQYFDSENAMYTAYMDMIAPISETGKLQAILFQFPPYFNCTKENV
HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCH
TYLKYIASKMGDLPVAIEFRHNSWYNEQNTEKTLELLRELGFIHTVVDEPQVGSGSVPIV
HHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCHHEECCCCCCCCCCCCEEE
LRETNSDMTLVRLHGRNQYGWMKANSPEWREVRTLYRYNEEEINEWAKYVEHLQKLSKEV
EEECCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCE
VVIFNNNSGGDAADNAKHLQKALQVEFQGLAPMQMDLFSE
EEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCC
>Mature Secondary Structure
MVTIGLTGWSDHDSLLQTKKLTLADYVAHFPVVEVDTSFYAIPSPRTTANWAAQTPDEFR
CEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCEEECCCCCCCCCCCCCCHHHHH
FVIKAFSAMTKHKEWSQYFDSENAMYTAYMDMIAPISETGKLQAILFQFPPYFNCTKENV
HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCH
TYLKYIASKMGDLPVAIEFRHNSWYNEQNTEKTLELLRELGFIHTVVDEPQVGSGSVPIV
HHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCHHEECCCCCCCCCCCCEEE
LRETNSDMTLVRLHGRNQYGWMKANSPEWREVRTLYRYNEEEINEWAKYVEHLQKLSKEV
EEECCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCE
VVIFNNNSGGDAADNAKHLQKALQVEFQGLAPMQMDLFSE
EEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]