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The map label for this gene is ybbK [H]

Identifier: 226224884

GI number: 226224884

Start: 2372611

End: 2373054

Strand: Reverse

Name: ybbK [H]

Synonym: Lm4b_02303

Alternate gene names: 226224884

Gene position: 2373054-2372611 (Counterclockwise)

Preceding gene: 226224885

Following gene: 226224882

Centisome position: 81.47

GC content: 38.96

Gene sequence:

>444_bases
ATGATTGCAGTAAGTGCTTGCCTAGCCGGAATTGCCTGTAGATATGACGGGAAAGATAAAGAAATAACCAAAATAAAACA
AATGGTAGAAAGAGGAGAAGCGATTCCTTTTTGTCCAGAAGTTACCGGCGGACTGCCTACACCAAGAAATCCAGCAGAAA
TAATAGGTGGTGATGGCAAAGATGTCTGGTTAGGACATGCAAAAGTCATTGATAACAAAGGAACAGATGTGACAGAAGAA
TATAAGAACGGAGCGAGACTTACTCTAATTAAAATGCAAGAACTCGGTATTACGCAAATAATCATGAAGGAAAAAAGTCC
ATCTTGTGGTAGCTGTGCTATTTACGACGGTACCTTCTCAGGAAAAATAAAAGATGGTACCGGCGTAGCAGCAGCTCTTT
TTCAAATGAATGGAATAAAAATCATTTCCGAATTCGCATTTTAA

Upstream 100 bases:

>100_bases
TAGCATACCAAAATATCTAATAATCTCAGAGCTGTCGCCTATAAGTTGGGGGCAGCTTTTTTATGTTAAAATAAATGTGA
ATATAAAGGAGGAAAATAAA

Downstream 100 bases:

>100_bases
AGTGCGAGCGAACCCATTGGATCCCAAGGTTTTAACACAATTGGCTTTTGGTTAAAGGATTCAATTAATTCCTTAGATAG
ATATTTTTTATGCACCACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MIAVSACLAGIACRYDGKDKEITKIKQMVERGEAIPFCPEVTGGLPTPRNPAEIIGGDGKDVWLGHAKVIDNKGTDVTEE
YKNGARLTLIKMQELGITQIIMKEKSPSCGSCAIYDGTFSGKIKDGTGVAAALFQMNGIKIISEFAF

Sequences:

>Translated_147_residues
MIAVSACLAGIACRYDGKDKEITKIKQMVERGEAIPFCPEVTGGLPTPRNPAEIIGGDGKDVWLGHAKVIDNKGTDVTEE
YKNGARLTLIKMQELGITQIIMKEKSPSCGSCAIYDGTFSGKIKDGTGVAAALFQMNGIKIISEFAF
>Mature_147_residues
MIAVSACLAGIACRYDGKDKEITKIKQMVERGEAIPFCPEVTGGLPTPRNPAEIIGGDGKDVWLGHAKVIDNKGTDVTEE
YKNGARLTLIKMQELGITQIIMKEKSPSCGSCAIYDGTFSGKIKDGTGVAAALFQMNGIKIISEFAF

Specific function: Unknown

COG id: COG1683

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007553 [H]

Pfam domain/function: PF04463 DUF523 [H]

EC number: NA

Molecular weight: Translated: 15714; Mature: 15714

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVSACLAGIACRYDGKDKEITKIKQMVERGEAIPFCPEVTGGLPTPRNPAEIIGGDGK
CEEHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEECCCCC
DVWLGHAKVIDNKGTDVTEEYKNGARLTLIKMQELGITQIIMKEKSPSCGSCAIYDGTFS
EEEEEEEEEECCCCCCHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEECCCCC
GKIKDGTGVAAALFQMNGIKIISEFAF
CEEECCCCHHHHHHHCCCCEEEEECCC
>Mature Secondary Structure
MIAVSACLAGIACRYDGKDKEITKIKQMVERGEAIPFCPEVTGGLPTPRNPAEIIGGDGK
CEEHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEECCCCC
DVWLGHAKVIDNKGTDVTEEYKNGARLTLIKMQELGITQIIMKEKSPSCGSCAIYDGTFS
EEEEEEEEEECCCCCCHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEECCCCC
GKIKDGTGVAAALFQMNGIKIISEFAF
CEEECCCCHHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]