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The map label for this gene is yqkD [H]

Identifier: 226224680

GI number: 226224680

Start: 2153347

End: 2154306

Strand: Direct

Name: yqkD [H]

Synonym: Lm4b_02095

Alternate gene names: 226224680

Gene position: 2153347-2154306 (Clockwise)

Preceding gene: 226224679

Following gene: 226224696

Centisome position: 73.93

GC content: 39.69

Gene sequence:

>960_bases
ATGAAAAAGATTTTAATTATTTCTAGTTCGATTATCGTTGGTTTACTTGTCATTATTACTATTTGCGCAAGTTTTTACTT
GTATAGTTATGCTTTAGCTCGTGACAATTCCAGCATGAATGACACTGCAACAACAGACGAAACCACTGCCACAGCCAAAC
TAGCAAAGAAAAACCGGGAAGAAAATGTGGCTTGGATGGAAAAGCAAAATCTCACGCAATGGACAGAAACCTCAGCAGAC
GATCTGAAACTTGTTGCTACTTATTTAGCAGCAGATAAACCATCTAACACAACCATCATTTTAGCCCACGGTTATCGCGG
TAAAAGCGGTAAAGTCGAAATGGCAGGTCTTGCTCGAATGTATCATGAAAAATTTGGTTACAACGTTTTAATGCCTGATG
CTAGAGCGCACGGCAAAAGCGAAGGTGAAAATATTGGATTTGGTTGGCCTGAACGCAAAGATTATGTGCAGTGGATTGAC
CAAGTAATCGACAAAAATGGTACGGACACTCAAATCACACTACATGGCGTTTCCATGGGTAGCTCCACTGTCCTTATGAC
CAGCGGCGAAAAACTACCAAAACAAGTAAAAAGTATTATCGCTGATTGCGGCTATACATCGATGGACGCCGAACTTTCGT
ATCAACTAAAAGCCATGTTCCACTTACCGAAATTCCCAATAATCCCAACAGCTAGTCTGATTAATAAATTCAAAGAAGGT
TTCTTTTTCAGCGAAGCAAGTGCAGTTGATGCGGTCGCTAAAACAGACGTACCCATTTTTTACATCCACGGTGATGCTGA
TGCTTTCGTCCCTACAAATATGGTAGACCAACTTTATAAAGCTACCAATAGCTATAAAGAAAAATGGATTGTCAAAGGAG
CAGAACACGGTCAAGCATTCACGATAGATCCAAAAACATACGAAGAAAAAGTACGCCAATTTTTAAATAAAACGATGTAA

Upstream 100 bases:

>100_bases
AGACGCCGTAAAAGCTGACGGAGAGAAATTAATGGAAGAATGGGAACAAATAAGCGAAGAACTGGAATCCATGTAATCTG
CATAAAAAAAGGAGCAAACA

Downstream 100 bases:

>100_bases
AAAGCAGTTATCCTCTAGGAACTAGATACTATCTGTTAGGAAGGAAAAAATTGGCAAGTAATAAGTAAATGTGTTACTAT
ATAAATGAAAAGAGAGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKKILIISSSIIVGLLVIITICASFYLYSYALARDNSSMNDTATTDETTATAKLAKKNREENVAWMEKQNLTQWTETSAD
DLKLVATYLAADKPSNTTIILAHGYRGKSGKVEMAGLARMYHEKFGYNVLMPDARAHGKSEGENIGFGWPERKDYVQWID
QVIDKNGTDTQITLHGVSMGSSTVLMTSGEKLPKQVKSIIADCGYTSMDAELSYQLKAMFHLPKFPIIPTASLINKFKEG
FFFSEASAVDAVAKTDVPIFYIHGDADAFVPTNMVDQLYKATNSYKEKWIVKGAEHGQAFTIDPKTYEEKVRQFLNKTM

Sequences:

>Translated_319_residues
MKKILIISSSIIVGLLVIITICASFYLYSYALARDNSSMNDTATTDETTATAKLAKKNREENVAWMEKQNLTQWTETSAD
DLKLVATYLAADKPSNTTIILAHGYRGKSGKVEMAGLARMYHEKFGYNVLMPDARAHGKSEGENIGFGWPERKDYVQWID
QVIDKNGTDTQITLHGVSMGSSTVLMTSGEKLPKQVKSIIADCGYTSMDAELSYQLKAMFHLPKFPIIPTASLINKFKEG
FFFSEASAVDAVAKTDVPIFYIHGDADAFVPTNMVDQLYKATNSYKEKWIVKGAEHGQAFTIDPKTYEEKVRQFLNKTM
>Mature_319_residues
MKKILIISSSIIVGLLVIITICASFYLYSYALARDNSSMNDTATTDETTATAKLAKKNREENVAWMEKQNLTQWTETSAD
DLKLVATYLAADKPSNTTIILAHGYRGKSGKVEMAGLARMYHEKFGYNVLMPDARAHGKSEGENIGFGWPERKDYVQWID
QVIDKNGTDTQITLHGVSMGSSTVLMTSGEKLPKQVKSIIADCGYTSMDAELSYQLKAMFHLPKFPIIPTASLINKFKEG
FFFSEASAVDAVAKTDVPIFYIHGDADAFVPTNMVDQLYKATNSYKEKWIVKGAEHGQAFTIDPKTYEEKVRQFLNKTM

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 35582; Mature: 35582

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILIISSSIIVGLLVIITICASFYLYSYALARDNSSMNDTATTDETTATAKLAKKNRE
CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC
ENVAWMEKQNLTQWTETSADDLKLVATYLAADKPSNTTIILAHGYRGKSGKVEMAGLARM
CCCHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHH
YHEKFGYNVLMPDARAHGKSEGENIGFGWPERKDYVQWIDQVIDKNGTDTQITLHGVSMG
HHHHCCCEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECC
SSTVLMTSGEKLPKQVKSIIADCGYTSMDAELSYQLKAMFHLPKFPIIPTASLINKFKEG
CCEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
FFFSEASAVDAVAKTDVPIFYIHGDADAFVPTNMVDQLYKATNSYKEKWIVKGAEHGQAF
CEECCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCEE
TIDPKTYEEKVRQFLNKTM
EECCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKILIISSSIIVGLLVIITICASFYLYSYALARDNSSMNDTATTDETTATAKLAKKNRE
CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC
ENVAWMEKQNLTQWTETSADDLKLVATYLAADKPSNTTIILAHGYRGKSGKVEMAGLARM
CCCHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHH
YHEKFGYNVLMPDARAHGKSEGENIGFGWPERKDYVQWIDQVIDKNGTDTQITLHGVSMG
HHHHCCCEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECC
SSTVLMTSGEKLPKQVKSIIADCGYTSMDAELSYQLKAMFHLPKFPIIPTASLINKFKEG
CCEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
FFFSEASAVDAVAKTDVPIFYIHGDADAFVPTNMVDQLYKATNSYKEKWIVKGAEHGQAF
CEECCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCEE
TIDPKTYEEKVRQFLNKTM
EECCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]