Click here to switch to the map view.

The map label for this gene is 226224655

Identifier: 226224655

GI number: 226224655

Start: 2130793

End: 2131965

Strand: Direct

Name: 226224655

Synonym: Lm4b_02070

Alternate gene names: NA

Gene position: 2130793-2131965 (Clockwise)

Preceding gene: 226224650

Following gene: 226224656

Centisome position: 73.16

GC content: 42.54

Gene sequence:

>1173_bases
ATGAAAGCAACTGGAATTGTGGTGGAATATAACCCTTTTCATAATGGGCATAAACTACATTTAAATAAAGCGCGCGAGTT
AACTCAAGCAGATGTGGTGATTGCGGTAATGAGTGGCTCGTTTGTACAACGAGGCGAACCAGCGATTTTGCCAAAATGGG
AACGTACTAGGATGGCTCTCGCTGCTGGCGTTGACATGGTGGTTGAACTCCCTGTCTCATTCGCGACACAACATGCGACG
ATTTTCGCAGAAGAAGCAGTTCGTATTTTAGATGCCATTCATGTGGATACGCTGTTTTTTGGCAGTGAACATGGAGTTGC
GGAAGATTTTACATTAGCTGCGAAAAAAGTAGTCGAAAACGAAGCCCGTTTTGATGAAGCGATTCAGCTGGCGTTAGTTG
ATAAGAAAACTTCTTATGCTAGAGCTTATACAGAAGCTTTTAAAAAGTTGTTCGGCCAGAACTTGCTGGATATCACGAAA
CCTAATAACATTCTCGGTTTCCACTACGCCCTTGCTGCCCAGAAACAAAACCCGTCCATTTCTCTTCACTCCATTCCTCG
TGAACATGCAGGATACCATGACGAGGAAGCAAACCATGACCAAATCGCAAGCGCGACCGCGATTCGAAAATTAATACTTG
CTGGGAAGTTAGAAGAAGCTAGCCACTATCTCCCTGCTTCTTCTATAGCTATTTTACGCAATTATGAGGGGCCATTTTTA
TCGTGGACAGATTATTGGTCATTCCTGCAATATCGGTTAATTCAAGCAGGCTCAGAAGAACTGGAAGGAATTCGCGGTGT
TAGTGAAGGAATTCAAAACCGGATGCAGCAAGCAGCGACTAAAGCGCAAAACTTCTCTGATTTTATAGAATTAACCAAAA
CAAAGCGATACAGTAATGCGCGATTACAACGAACGGCTTTACAAATTTTATTAAATGCGAGGAGTCAAACTAGCTCCCCT
TACATCCGAATACTCGGCATGAATAAAACGGGGCAACAATATCTATCGCTTCATAAGAAAAATATTTCTCTCCCTATTAT
CACGACGGTTTCCAAAGCACCAGCTGGGCTTTTAGAAGAAGAATTACGTGCGACAAACATTTATACGCTGGCAAAAGGAC
TGGAAAATTATCAGGCTGGCGACTTTCATATTCCACCAATTTTAACCTTGTAA

Upstream 100 bases:

>100_bases
ATTATAGCTTTTTTAAAGGCTTTTGTCAATGCTTTTTCGGGGAGTAAAACCGCTGCCTTCATTTTATGCTAAAATAGATT
ATCTAAAGGAGGGAACCGAA

Downstream 100 bases:

>100_bases
TCTTTACAAGGTTTTTGGTTGACTTTTATGGGGCTATTTTGCTAAGATGTTTGTCCGACTCAAAAAACAGGAGGTATGTG
TATGGTACAAGAATATATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MKATGIVVEYNPFHNGHKLHLNKARELTQADVVIAVMSGSFVQRGEPAILPKWERTRMALAAGVDMVVELPVSFATQHAT
IFAEEAVRILDAIHVDTLFFGSEHGVAEDFTLAAKKVVENEARFDEAIQLALVDKKTSYARAYTEAFKKLFGQNLLDITK
PNNILGFHYALAAQKQNPSISLHSIPREHAGYHDEEANHDQIASATAIRKLILAGKLEEASHYLPASSIAILRNYEGPFL
SWTDYWSFLQYRLIQAGSEELEGIRGVSEGIQNRMQQAATKAQNFSDFIELTKTKRYSNARLQRTALQILLNARSQTSSP
YIRILGMNKTGQQYLSLHKKNISLPIITTVSKAPAGLLEEELRATNIYTLAKGLENYQAGDFHIPPILTL

Sequences:

>Translated_390_residues
MKATGIVVEYNPFHNGHKLHLNKARELTQADVVIAVMSGSFVQRGEPAILPKWERTRMALAAGVDMVVELPVSFATQHAT
IFAEEAVRILDAIHVDTLFFGSEHGVAEDFTLAAKKVVENEARFDEAIQLALVDKKTSYARAYTEAFKKLFGQNLLDITK
PNNILGFHYALAAQKQNPSISLHSIPREHAGYHDEEANHDQIASATAIRKLILAGKLEEASHYLPASSIAILRNYEGPFL
SWTDYWSFLQYRLIQAGSEELEGIRGVSEGIQNRMQQAATKAQNFSDFIELTKTKRYSNARLQRTALQILLNARSQTSSP
YIRILGMNKTGQQYLSLHKKNISLPIITTVSKAPAGLLEEELRATNIYTLAKGLENYQAGDFHIPPILTL
>Mature_390_residues
MKATGIVVEYNPFHNGHKLHLNKARELTQADVVIAVMSGSFVQRGEPAILPKWERTRMALAAGVDMVVELPVSFATQHAT
IFAEEAVRILDAIHVDTLFFGSEHGVAEDFTLAAKKVVENEARFDEAIQLALVDKKTSYARAYTEAFKKLFGQNLLDITK
PNNILGFHYALAAQKQNPSISLHSIPREHAGYHDEEANHDQIASATAIRKLILAGKLEEASHYLPASSIAILRNYEGPFL
SWTDYWSFLQYRLIQAGSEELEGIRGVSEGIQNRMQQAATKAQNFSDFIELTKTKRYSNARLQRTALQILLNARSQTSSP
YIRILGMNKTGQQYLSLHKKNISLPIITTVSKAPAGLLEEELRATNIYTLAKGLENYQAGDFHIPPILTL

Specific function: Unknown

COG id: COG1323

COG function: function code R; Predicted nucleotidyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0348 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR008513 [H]

Pfam domain/function: PF05636 DUF795 [H]

EC number: NA

Molecular weight: Translated: 43500; Mature: 43500

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATGIVVEYNPFHNGHKLHLNKARELTQADVVIAVMSGSFVQRGEPAILPKWERTRMAL
CCCCEEEEEECCCCCCCEEEEHHHHHHHHHCEEEEEECCCHHHCCCCCCCCCHHHHHHHH
AAGVDMVVELPVSFATQHATIFAEEAVRILDAIHVDTLFFGSEHGVAEDFTLAAKKVVEN
HHCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHH
EARFDEAIQLALVDKKTSYARAYTEAFKKLFGQNLLDITKPNNILGFHYALAAQKQNPSI
HHHHHHHHEEEEECCCHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEEEEECCCCCCE
SLHSIPREHAGYHDEEANHDQIASATAIRKLILAGKLEEASHYLPASSIAILRNYEGPFL
EEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHEEEEECCCCCCC
SWTDYWSFLQYRLIQAGSEELEGIRGVSEGIQNRMQQAATKAQNFSDFIELTKTKRYSNA
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
RLQRTALQILLNARSQTSSPYIRILGMNKTGQQYLSLHKKNISLPIITTVSKAPAGLLEE
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHH
ELRATNIYTLAKGLENYQAGDFHIPPILTL
HHHHHHHHHHHHHHHHCCCCCEECCCCCCC
>Mature Secondary Structure
MKATGIVVEYNPFHNGHKLHLNKARELTQADVVIAVMSGSFVQRGEPAILPKWERTRMAL
CCCCEEEEEECCCCCCCEEEEHHHHHHHHHCEEEEEECCCHHHCCCCCCCCCHHHHHHHH
AAGVDMVVELPVSFATQHATIFAEEAVRILDAIHVDTLFFGSEHGVAEDFTLAAKKVVEN
HHCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHH
EARFDEAIQLALVDKKTSYARAYTEAFKKLFGQNLLDITKPNNILGFHYALAAQKQNPSI
HHHHHHHHEEEEECCCHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEEEEECCCCCCE
SLHSIPREHAGYHDEEANHDQIASATAIRKLILAGKLEEASHYLPASSIAILRNYEGPFL
EEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHEEEEECCCCCCC
SWTDYWSFLQYRLIQAGSEELEGIRGVSEGIQNRMQQAATKAQNFSDFIELTKTKRYSNA
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
RLQRTALQILLNARSQTSSPYIRILGMNKTGQQYLSLHKKNISLPIITTVSKAPAGLLEE
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHH
ELRATNIYTLAKGLENYQAGDFHIPPILTL
HHHHHHHHHHHHHHHHCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]