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The map label for this gene is yhjP [H]

Identifier: 226224650

GI number: 226224650

Start: 2126697

End: 2128511

Strand: Direct

Name: yhjP [H]

Synonym: Lm4b_02065

Alternate gene names: 226224650

Gene position: 2126697-2128511 (Clockwise)

Preceding gene: 226224622

Following gene: 226224655

Centisome position: 73.01

GC content: 37.25

Gene sequence:

>1815_bases
ATGGATAAAGATTATTTCACTATGCGCGCGCATTTATACAATATAACTACCGATTTAGAAGTGTCTTTCAAATTAAATGA
TGTGGCAAATATTTGGTTTTGTACGACTAAAAATGCCAAGCGTAAACTGCAACAATATCAGGTGAAAAAAATGCTTACTT
ATCTTCCTGGACTAGGCCGAGGAAATGTTTCAAGGATTATTTTTCCTAAACAGTTAGAACTAGAGGTTCTTGACGTTTTG
GAACAAAGTTTGGATGAAGATGCATTTAGCGATATTTTATTTTTGCTACAATTGCCTATCCCTAAAAGCTGGTTTACAAG
TATCTCTACGGAAATTCAACAAATGTTCGGTTTGCAAGTAACAGAAAATCAACAAGAAGTTCTGCGCTCCATCGTTCGTC
GCAAGCTCACTACCTTAGATCCACTTCAAACTTCTGTATCTATGGAAGCATTTCTCATCACCCAAATTAGTGACTCTCTC
GTCAAATATGATGAAGAGAAAAAGAAAATTATACCTCATATAGCACACCACTGGAAAGTATCTGATGATTTTACGGAATG
GACATTTTATTTACGAAAAAGTGTTTTATTTCATCACGGACGCATGCTGGATAGCGAGGATGTAAAGTACACCTTGATGC
GTTCTATGCAAACAGAATCGGTTTCTTTCTGGCAATTACAGGATATTCAATCCATCCACTGCCCTAATAAATTCACGATC
TCCATTCAGCTAAAAAAAACGGACCCTTTTTTCATTCGTTATTTATGCACAGCGAATATGGCTATTTTACCGCGAGATAT
TATTTTTGATGAATATACATGGATTTCTACTGGTCCCTTTCGAGTTGCAGAGCGGAATGACGAGCGCTTGGTCTTAGAAG
CCTTTGATGGATATTTTCTCGAGAGACCGATTCTTGATCGAGTAGAATTTTGGACCGCCCAAACTGGAAACAATTTAAAA
ACCATTCCAATGCAATTCACTTCCGTTGATTACGAGGAAAATCCCGCCTATGTAGAACGTCGTAAACCTGGTGTTGGCGT
TAATTTTATTTGTTTCAATACGTACCGAAATGGCGCCCCACAACATCCGGCATTTCGAGAGGCAATCTACCATCTCATTG
ATTGTCAAAAAGCAAGTGAACAACATTTCGAAAACTATGGGACAGTCGCATCTAACTATTATCCTGAAAAATCCCTTCCA
CCTAAAAAACATCCTGAGAAAATCGCTACTTTATTAAAAAAAGCAAACTACCAAGGCGAAAAAGTTATTTTTGGAACTAC
CCAACATCCTACCGCTGTAAAAGAGTCAAAATGGATTCAAGAGCAAGCTGTCGAATTCGGAATTAACTTAGAAAGAAAAA
TCATTACGCATCAGGAAGCTTCCTATTCCAACGTTCCAGCAAAAGAAACCGACTTCATGATGATGGGAGAAATCCCAGCC
TCAGATGACGAAATGGCTTATTTAGATTTTTTAAATAACCCCTATCTGTTGCCACAACAACTTTTCAATCAAGCAATTAT
CAAAGAACTTACGGAAAAGCTCGATGCATTTAAAACAGAAAAAGACGCCTCCAAAAGAGACGCCTTACAAACGAGCATTG
ATAGCTGGTTAACAGAAAATCATTATTTAATTTACTTGCATCATCCGGAAAAAAGTCAATCGCTTCATTCAATGATAAAA
GGAATTGCAGAAAATCCTTATGGTTATTTTGATTTAAGCAAAGTGTGGATTGAAACAAGCCCACTTAAAACATTAAAACC
AGACTATAGACAATCCCATAGAGGTAAAGCGCCACATACAATAACGCAAAAATGA

Upstream 100 bases:

>100_bases
GCAATTTTTCTGACTTCTCTGCTAGTATAAAAGGGATACATAAATTTAAAAAGGGTATTCATTTTCATATATTGTCCCCT
TTTAGGACGGAGCTGTTGTT

Downstream 100 bases:

>100_bases
AGAAGCATAGGCGCCAGTAACCACGTAGGATTTTGCGGAACTGAATCTCGCCTTCTTTCTTTGCAGCCGTGACAACAATT
ACAATACCTAAAATAAATAA

Product: transporter binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 604; Mature: 604

Protein sequence:

>604_residues
MDKDYFTMRAHLYNITTDLEVSFKLNDVANIWFCTTKNAKRKLQQYQVKKMLTYLPGLGRGNVSRIIFPKQLELEVLDVL
EQSLDEDAFSDILFLLQLPIPKSWFTSISTEIQQMFGLQVTENQQEVLRSIVRRKLTTLDPLQTSVSMEAFLITQISDSL
VKYDEEKKKIIPHIAHHWKVSDDFTEWTFYLRKSVLFHHGRMLDSEDVKYTLMRSMQTESVSFWQLQDIQSIHCPNKFTI
SIQLKKTDPFFIRYLCTANMAILPRDIIFDEYTWISTGPFRVAERNDERLVLEAFDGYFLERPILDRVEFWTAQTGNNLK
TIPMQFTSVDYEENPAYVERRKPGVGVNFICFNTYRNGAPQHPAFREAIYHLIDCQKASEQHFENYGTVASNYYPEKSLP
PKKHPEKIATLLKKANYQGEKVIFGTTQHPTAVKESKWIQEQAVEFGINLERKIITHQEASYSNVPAKETDFMMMGEIPA
SDDEMAYLDFLNNPYLLPQQLFNQAIIKELTEKLDAFKTEKDASKRDALQTSIDSWLTENHYLIYLHHPEKSQSLHSMIK
GIAENPYGYFDLSKVWIETSPLKTLKPDYRQSHRGKAPHTITQK

Sequences:

>Translated_604_residues
MDKDYFTMRAHLYNITTDLEVSFKLNDVANIWFCTTKNAKRKLQQYQVKKMLTYLPGLGRGNVSRIIFPKQLELEVLDVL
EQSLDEDAFSDILFLLQLPIPKSWFTSISTEIQQMFGLQVTENQQEVLRSIVRRKLTTLDPLQTSVSMEAFLITQISDSL
VKYDEEKKKIIPHIAHHWKVSDDFTEWTFYLRKSVLFHHGRMLDSEDVKYTLMRSMQTESVSFWQLQDIQSIHCPNKFTI
SIQLKKTDPFFIRYLCTANMAILPRDIIFDEYTWISTGPFRVAERNDERLVLEAFDGYFLERPILDRVEFWTAQTGNNLK
TIPMQFTSVDYEENPAYVERRKPGVGVNFICFNTYRNGAPQHPAFREAIYHLIDCQKASEQHFENYGTVASNYYPEKSLP
PKKHPEKIATLLKKANYQGEKVIFGTTQHPTAVKESKWIQEQAVEFGINLERKIITHQEASYSNVPAKETDFMMMGEIPA
SDDEMAYLDFLNNPYLLPQQLFNQAIIKELTEKLDAFKTEKDASKRDALQTSIDSWLTENHYLIYLHHPEKSQSLHSMIK
GIAENPYGYFDLSKVWIETSPLKTLKPDYRQSHRGKAPHTITQK
>Mature_604_residues
MDKDYFTMRAHLYNITTDLEVSFKLNDVANIWFCTTKNAKRKLQQYQVKKMLTYLPGLGRGNVSRIIFPKQLELEVLDVL
EQSLDEDAFSDILFLLQLPIPKSWFTSISTEIQQMFGLQVTENQQEVLRSIVRRKLTTLDPLQTSVSMEAFLITQISDSL
VKYDEEKKKIIPHIAHHWKVSDDFTEWTFYLRKSVLFHHGRMLDSEDVKYTLMRSMQTESVSFWQLQDIQSIHCPNKFTI
SIQLKKTDPFFIRYLCTANMAILPRDIIFDEYTWISTGPFRVAERNDERLVLEAFDGYFLERPILDRVEFWTAQTGNNLK
TIPMQFTSVDYEENPAYVERRKPGVGVNFICFNTYRNGAPQHPAFREAIYHLIDCQKASEQHFENYGTVASNYYPEKSLP
PKKHPEKIATLLKKANYQGEKVIFGTTQHPTAVKESKWIQEQAVEFGINLERKIITHQEASYSNVPAKETDFMMMGEIPA
SDDEMAYLDFLNNPYLLPQQLFNQAIIKELTEKLDAFKTEKDASKRDALQTSIDSWLTENHYLIYLHHPEKSQSLHSMIK
GIAENPYGYFDLSKVWIETSPLKTLKPDYRQSHRGKAPHTITQK

Specific function: Unknown

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786256, Length=566, Percent_Identity=23.8515901060071, Blast_Score=103, Evalue=4e-23,
Organism=Escherichia coli, GI1786650, Length=568, Percent_Identity=22.887323943662, Blast_Score=102, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 70536; Mature: 70536

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKDYFTMRAHLYNITTDLEVSFKLNDVANIWFCTTKNAKRKLQQYQVKKMLTYLPGLGR
CCCCEEEEEEEEEEEEECEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCC
GNVSRIIFPKQLELEVLDVLEQSLDEDAFSDILFLLQLPIPKSWFTSISTEIQQMFGLQV
CCCEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEE
TENQQEVLRSIVRRKLTTLDPLQTSVSMEAFLITQISDSLVKYDEEKKKIIPHIAHHWKV
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC
SDDFTEWTFYLRKSVLFHHGRMLDSEDVKYTLMRSMQTESVSFWQLQDIQSIHCPNKFTI
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEHHCHHHHCCCCEEEE
SIQLKKTDPFFIRYLCTANMAILPRDIIFDEYTWISTGPFRVAERNDERLVLEAFDGYFL
EEEEECCCCCEEHHHHHCCCEECCHHHHCCCCEEECCCCEEEECCCCCEEEEEECCCHHH
ERPILDRVEFWTAQTGNNLKTIPMQFTSVDYEENPAYVERRKPGVGVNFICFNTYRNGAP
CCCHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHHCCCCCCEEEEEEECCCCCCC
QHPAFREAIYHLIDCQKASEQHFENYGTVASNYYPEKSLPPKKHPEKIATLLKKANYQGE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
KVIFGTTQHPTAVKESKWIQEQAVEFGINLERKIITHQEASYSNVPAKETDFMMMGEIPA
EEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCCCCEEEECCCCC
SDDEMAYLDFLNNPYLLPQQLFNQAIIKELTEKLDAFKTEKDASKRDALQTSIDSWLTEN
CCCCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
HYLIYLHHPEKSQSLHSMIKGIAENPYGYFDLSKVWIETSPLKTLKPDYRQSHRGKAPHT
CEEEEEECCCHHHHHHHHHHHHHCCCCCEEEHHEEEEECCCCCCCCCCHHHHCCCCCCCC
ITQK
CCCC
>Mature Secondary Structure
MDKDYFTMRAHLYNITTDLEVSFKLNDVANIWFCTTKNAKRKLQQYQVKKMLTYLPGLGR
CCCCEEEEEEEEEEEEECEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCC
GNVSRIIFPKQLELEVLDVLEQSLDEDAFSDILFLLQLPIPKSWFTSISTEIQQMFGLQV
CCCEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEE
TENQQEVLRSIVRRKLTTLDPLQTSVSMEAFLITQISDSLVKYDEEKKKIIPHIAHHWKV
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC
SDDFTEWTFYLRKSVLFHHGRMLDSEDVKYTLMRSMQTESVSFWQLQDIQSIHCPNKFTI
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEHHCHHHHCCCCEEEE
SIQLKKTDPFFIRYLCTANMAILPRDIIFDEYTWISTGPFRVAERNDERLVLEAFDGYFL
EEEEECCCCCEEHHHHHCCCEECCHHHHCCCCEEECCCCEEEECCCCCEEEEEECCCHHH
ERPILDRVEFWTAQTGNNLKTIPMQFTSVDYEENPAYVERRKPGVGVNFICFNTYRNGAP
CCCHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHHCCCCCCEEEEEEECCCCCCC
QHPAFREAIYHLIDCQKASEQHFENYGTVASNYYPEKSLPPKKHPEKIATLLKKANYQGE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
KVIFGTTQHPTAVKESKWIQEQAVEFGINLERKIITHQEASYSNVPAKETDFMMMGEIPA
EEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCCCCEEEECCCCC
SDDEMAYLDFLNNPYLLPQQLFNQAIIKELTEKLDAFKTEKDASKRDALQTSIDSWLTEN
CCCCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
HYLIYLHHPEKSQSLHSMIKGIAENPYGYFDLSKVWIETSPLKTLKPDYRQSHRGKAPHT
CEEEEEECCCHHHHHHHHHHHHHCCCCCEEEHHEEEEECCCCCCCCCCHHHHCCCCCCCC
ITQK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]