| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is malE [C]
Identifier: 226224333
GI number: 226224333
Start: 1782110
End: 1783354
Strand: Direct
Name: malE [C]
Synonym: Lm4b_01744
Alternate gene names: 226224333
Gene position: 1782110-1783354 (Clockwise)
Preceding gene: 226224319
Following gene: 226224334
Centisome position: 61.18
GC content: 38.8
Gene sequence:
>1245_bases ATGAAGAAAAAGATGTTTGTCGTTTTAGCTTTAGTGTTGTCGCTTAGTTTAGTGTTAATGGCGTGTGGTGGGTCAAAGGA TGATGCAAATTCCGGCGATTCTAAAGTATTAAATGTTTGGGCAATGGGTGATGAAGCCAAGTCACTAAAAGAACTCGCAC AAAAATTCACGAAAGATACTGGCATTGAAGTTAAAGTTCAAGTTATTCCTTGGGCAAATGCACATGATAAATTACTTACA GCCGTTGCTTCTAAATCTGGCCCCGATGTAGTCCAAATGGGAACTACTTGGATGCCTGAATTTGTCGAAGCTGGCGCACT ACTTGATATTACAAAAGATGTCGAAAAAAGTAAAAATATGAATTCTGATCTATTTTTCCCAGGTTCAGTAAAAACTACTC AATTTGACGGGAAAACTTACGGTGTTCCGTGGTATGCAGAAACTCGCGTATTATTCTACCGTACCGATTTACTGAAAAAA GTTGGTTATAATGAAGCTCCAAAAACATGGGATGAACTATCCGACGCTGCACTTAAACTTTCTAAACGTGGCAAAGATAT GTACGGCTTTGCCATTGATCCAAACGAACAAACGACTGGTTTCATTTTCGGACGTCAAAACGGCTCCCCTCTTTTCGATA AAGATGGTCAACCAGTATTCAATAAAAAACCTTTCGTAGACACTGTTAGTTATTTAGATAGTTTCATTAAAAATGGTTCC GCTCCAGATACTGATCTTGGTTTAGATGCTTCTCAAAGCTTCGGCGGCGACGGTATTGTGCCAATGTTCATGAGTGGTCC TTGGATGGTTAATACACTGAAAGACACTGCCCCTGACATTGACGGAAAATGGGCTACTGCAGTATTACCTAAAAAAGAAA ATAACGAATCAAGCCTTGGTGGCGCTAACCTTTCCATTTTCAAATATAGTGATAAGAAAGATGATGCTCTAAAATTCATG GACTACATGAGTCAACCTGATGTGCAATTATCTTGGTTAAAAGATACAAACTCCATGCCAGCTCGTATGGATGCTTGGGA AGATGATATGCTGAAAAATGACCCTTACTACAAAGTATTCGGCGAACAAATGAAAACAGCTGAACCAATGCCACTTATCC CACAATTTGAGGAAATCGCTCAATTATATGGAAAATCTTGGGAACAAATTTATCGTGGTGGTGCAGATGTACAAACACAA ATGGATACTTTCAACGATCAAGTAGAAGCACTTCTTAAAAAATAA
Upstream 100 bases:
>100_bases ATCCCGTACGGCGCACTAGTTCCGTGCAACAGTTTTTATTCTTTAACAGCTTTTAGTTAATCAAGTTGCTTTGAAAAAAA CAAAAAATGGAGGAAAAATC
Downstream 100 bases:
>100_bases CGAATAAAAAGGGCAAATGATTTATTCTGCCATTTGCCCTTTTAGAATGGACTGGATGTTATGAAACAATTTTTAAATAA AAATACACCCTATTTGTTTA
Product: sugar ABC transporter binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MKKKMFVVLALVLSLSLVLMACGGSKDDANSGDSKVLNVWAMGDEAKSLKELAQKFTKDTGIEVKVQVIPWANAHDKLLT AVASKSGPDVVQMGTTWMPEFVEAGALLDITKDVEKSKNMNSDLFFPGSVKTTQFDGKTYGVPWYAETRVLFYRTDLLKK VGYNEAPKTWDELSDAALKLSKRGKDMYGFAIDPNEQTTGFIFGRQNGSPLFDKDGQPVFNKKPFVDTVSYLDSFIKNGS APDTDLGLDASQSFGGDGIVPMFMSGPWMVNTLKDTAPDIDGKWATAVLPKKENNESSLGGANLSIFKYSDKKDDALKFM DYMSQPDVQLSWLKDTNSMPARMDAWEDDMLKNDPYYKVFGEQMKTAEPMPLIPQFEEIAQLYGKSWEQIYRGGADVQTQ MDTFNDQVEALLKK
Sequences:
>Translated_414_residues MKKKMFVVLALVLSLSLVLMACGGSKDDANSGDSKVLNVWAMGDEAKSLKELAQKFTKDTGIEVKVQVIPWANAHDKLLT AVASKSGPDVVQMGTTWMPEFVEAGALLDITKDVEKSKNMNSDLFFPGSVKTTQFDGKTYGVPWYAETRVLFYRTDLLKK VGYNEAPKTWDELSDAALKLSKRGKDMYGFAIDPNEQTTGFIFGRQNGSPLFDKDGQPVFNKKPFVDTVSYLDSFIKNGS APDTDLGLDASQSFGGDGIVPMFMSGPWMVNTLKDTAPDIDGKWATAVLPKKENNESSLGGANLSIFKYSDKKDDALKFM DYMSQPDVQLSWLKDTNSMPARMDAWEDDMLKNDPYYKVFGEQMKTAEPMPLIPQFEEIAQLYGKSWEQIYRGGADVQTQ MDTFNDQVEALLKK >Mature_414_residues MKKKMFVVLALVLSLSLVLMACGGSKDDANSGDSKVLNVWAMGDEAKSLKELAQKFTKDTGIEVKVQVIPWANAHDKLLT AVASKSGPDVVQMGTTWMPEFVEAGALLDITKDVEKSKNMNSDLFFPGSVKTTQFDGKTYGVPWYAETRVLFYRTDLLKK VGYNEAPKTWDELSDAALKLSKRGKDMYGFAIDPNEQTTGFIFGRQNGSPLFDKDGQPVFNKKPFVDTVSYLDSFIKNGS APDTDLGLDASQSFGGDGIVPMFMSGPWMVNTLKDTAPDIDGKWATAVLPKKENNESSLGGANLSIFKYSDKKDDALKFM DYMSQPDVQLSWLKDTNSMPARMDAWEDDMLKNDPYYKVFGEQMKTAEPMPLIPQFEEIAQLYGKSWEQIYRGGADVQTQ MDTFNDQVEALLKK
Specific function: Probably part of an ABC transporter complex [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790466, Length=379, Percent_Identity=25.5936675461741, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1787569, Length=409, Percent_Identity=22.2493887530562, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR006061 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 46069; Mature: 46069
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKMFVVLALVLSLSLVLMACGGSKDDANSGDSKVLNVWAMGDEAKSLKELAQKFTKDT CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCC GIEVKVQVIPWANAHDKLLTAVASKSGPDVVQMGTTWMPEFVEAGALLDITKDVEKSKNM CCEEEEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCCHHHHHCCCEEEHHHHHHHHCCC NSDLFFPGSVKTTQFDGKTYGVPWYAETRVLFYRTDLLKKVGYNEAPKTWDELSDAALKL CCCEEECCCCEEEEECCEEECCCCEECCEEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHH SKRGKDMYGFAIDPNEQTTGFIFGRQNGSPLFDKDGQPVFNKKPFVDTVSYLDSFIKNGS HHCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC APDTDLGLDASQSFGGDGIVPMFMSGPWMVNTLKDTAPDIDGKWATAVLPKKENNESSLG CCCCCCCCCCCCCCCCCCCEEHEECCCEEEEEHHHCCCCCCCCEEEEECCCCCCCCCCCC GANLSIFKYSDKKDDALKFMDYMSQPDVQLSWLKDTNSMPARMDAWEDDMLKNDPYYKVF CCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCHHHHH GEQMKTAEPMPLIPQFEEIAQLYGKSWEQIYRGGADVQTQMDTFNDQVEALLKK HHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKKMFVVLALVLSLSLVLMACGGSKDDANSGDSKVLNVWAMGDEAKSLKELAQKFTKDT CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCC GIEVKVQVIPWANAHDKLLTAVASKSGPDVVQMGTTWMPEFVEAGALLDITKDVEKSKNM CCEEEEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCCHHHHHCCCEEEHHHHHHHHCCC NSDLFFPGSVKTTQFDGKTYGVPWYAETRVLFYRTDLLKKVGYNEAPKTWDELSDAALKL CCCEEECCCCEEEEECCEEECCCCEECCEEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHH SKRGKDMYGFAIDPNEQTTGFIFGRQNGSPLFDKDGQPVFNKKPFVDTVSYLDSFIKNGS HHCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC APDTDLGLDASQSFGGDGIVPMFMSGPWMVNTLKDTAPDIDGKWATAVLPKKENNESSLG CCCCCCCCCCCCCCCCCCCEEHEECCCEEEEEHHHCCCCCCCCEEEEECCCCCCCCCCCC GANLSIFKYSDKKDDALKFMDYMSQPDVQLSWLKDTNSMPARMDAWEDDMLKNDPYYKVF CCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCHHHHH GEQMKTAEPMPLIPQFEEIAQLYGKSWEQIYRGGADVQTQMDTFNDQVEALLKK HHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA