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The map label for this gene is uidR [C]

Identifier: 226224319

GI number: 226224319

Start: 1764181

End: 1764756

Strand: Direct

Name: uidR [C]

Synonym: Lm4b_01730

Alternate gene names: 226224319

Gene position: 1764181-1764756 (Clockwise)

Preceding gene: 226224316

Following gene: 226224333

Centisome position: 60.57

GC content: 34.38

Gene sequence:

>576_bases
ATGAATAATTATGAAAAAAGAACGCTAAAAAAGAAGACTGCAATTATTCAGGCAGCTCTTTCATTATTTGGAGAACAAGG
TTTTTCTGATGTAAGTATTAAAGATATTGCAAGTCTCGCAGATGTTTCGCAAGTGTCTATTTATAATTATTTTGGAAGTA
AAGAAGCGCTTGTTGGTGAATGTGCTAGCATTATTATGCAAGATACCATTACTTTAGCGGAAGAAATTTTAGCATCAGAA
GGAACATTCACGCAAAAATTAGAGCGGGCTCTCCAGCTCTGTAATGCAGAAATAAATCTGTCTTTAAGTAAATTTATATC
GCAAGAAGCGAGTAAAGACGCGCAATTTATCACGCTGTTAGTGAATAATATTAATGTACTTAAAAACGAGATTTATATGA
AATATATCGCTATCGGCAAGCAAGAAAAAATTATTGATAGCCGTCTTTCGGATCAATCTATTCAACTTTTTATTGAAGCA
ATTAATGGTTTAGGTTTCACAGTCCCCGAGGAAGAGCTTGAGGAGAAACAGGCGGAGATATTGCAGTTGTTTTTGTATGG
GTTGATTGGGAAATAA

Upstream 100 bases:

>100_bases
GTCAATAACTTTTGAAATTTATTAGTTAATATTTCAAATTAAAAGTTTCTATGTTATATTATTACTAAAGATAAGATTAG
CTTAGGGAAGTGTTTAGGAT

Downstream 100 bases:

>100_bases
TATTAAAAATGAAAGGGACCAATAAGATTGACAAAGAATATGCCAATCTTATTGGTCCTTTTTAAGTAGACTTTTGTATT
ATAAGTATCTCTCGACTACA

Product: transcription regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNNYEKRTLKKKTAIIQAALSLFGEQGFSDVSIKDIASLADVSQVSIYNYFGSKEALVGECASIIMQDTITLAEEILASE
GTFTQKLERALQLCNAEINLSLSKFISQEASKDAQFITLLVNNINVLKNEIYMKYIAIGKQEKIIDSRLSDQSIQLFIEA
INGLGFTVPEEELEEKQAEILQLFLYGLIGK

Sequences:

>Translated_191_residues
MNNYEKRTLKKKTAIIQAALSLFGEQGFSDVSIKDIASLADVSQVSIYNYFGSKEALVGECASIIMQDTITLAEEILASE
GTFTQKLERALQLCNAEINLSLSKFISQEASKDAQFITLLVNNINVLKNEIYMKYIAIGKQEKIIDSRLSDQSIQLFIEA
INGLGFTVPEEELEEKQAEILQLFLYGLIGK
>Mature_191_residues
MNNYEKRTLKKKTAIIQAALSLFGEQGFSDVSIKDIASLADVSQVSIYNYFGSKEALVGECASIIMQDTITLAEEILASE
GTFTQKLERALQLCNAEINLSLSKFISQEASKDAQFITLLVNNINVLKNEIYMKYIAIGKQEKIIDSRLSDQSIQLFIEA
INGLGFTVPEEELEEKQAEILQLFLYGLIGK

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21285; Mature: 21285

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNYEKRTLKKKTAIIQAALSLFGEQGFSDVSIKDIASLADVSQVSIYNYFGSKEALVGE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
CASIIMQDTITLAEEILASEGTFTQKLERALQLCNAEINLSLSKFISQEASKDAQFITLL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHCHHHHHHHHHHHCCHHHHHHHH
VNNINVLKNEIYMKYIAIGKQEKIIDSRLSDQSIQLFIEAINGLGFTVPEEELEEKQAEI
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LQLFLYGLIGK
HHHHHHHHHCC
>Mature Secondary Structure
MNNYEKRTLKKKTAIIQAALSLFGEQGFSDVSIKDIASLADVSQVSIYNYFGSKEALVGE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
CASIIMQDTITLAEEILASEGTFTQKLERALQLCNAEINLSLSKFISQEASKDAQFITLL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHCHHHHHHHHHHHCCHHHHHHHH
VNNINVLKNEIYMKYIAIGKQEKIIDSRLSDQSIQLFIEAINGLGFTVPEEELEEKQAEI
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LQLFLYGLIGK
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA