| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is ytgP [H]
Identifier: 226224225
GI number: 226224225
Start: 1649817
End: 1651430
Strand: Reverse
Name: ytgP [H]
Synonym: Lm4b_01635
Alternate gene names: 226224225
Gene position: 1651430-1649817 (Counterclockwise)
Preceding gene: 226224226
Following gene: 226224224
Centisome position: 56.7
GC content: 39.1
Gene sequence:
>1614_bases ATGGGTTCAAAACTGCTCAGAGGAACATTTATTCTGACGCTAGGGACATTAATCTCTAAAGTGCTCGGAATATTGTATGT GATTCCGTTTTATGCGATTATTGGAGGAGATGAACCAGCGCTTCTATATAATTTCGGTTATGTGCCGTATCAATTATTCT TAAGCATTGCGACTGCAGGGATTCCGCTGGCTGTTGCTAAATATATAGCAAAATATAATGCGATGGAAGAATACGCTGTA GGTCGACGTTTATTTAAAACCGGTGTATATTTAATGATTTTCTCCGGCATTGTCTGTTTCCTAGCAATGTATGGACTTGC TCCAACGCTTGCTCGGATGCAACAACTGGAGGGCGGTTATAGTTTAGCAGATGGGATTCAAGTTATTCGTGCAGTTAGTT TCGCCTTACTAATTATTCCGGTAATGAGTTTACTACGAGGCTTTTTCCAAGGATATAATTCGATGGGACCTTCTGCTGTA TCGCAAGTGTTAGAACAAGTTGTTCGGATTATGTTCTTACTTGCTGGAACATTTATTGTCATGTATGTACTTGATGGGAA TGTCGTAACGGCTATTAGTATTGCTACTTTCTCCGCGTTTGTCGGCGCTTTTGCAAGTCTACTTTTACTTCTTTGGTATT TTTACAAACGAAAACCTGGACTGGACCGAATGCTTTTAGAAGACAGAGGGACTGTGAAAATTTCTATCCCGACGCTTTAT AAAGATATTATTCTTTCGGCGATTCCGTTTATTATTGTTGGATCTGCTACATCCCTTTATCAATTGATTGACCAGTTTAC ATTAGGACGGGTACTGGAATATATTGGCATTACGCCGGAACTAGTGAATTCTTATGTGGCAATTATTAACTTTGATGTAC AAAAATTGATTATGATTCCCGGCACACTCGCGATTGCGTTTTCGATGGCGCTTGTCCCACTAGTGACGGGAGCTTATGTG AGAAAAGAATATGCGCAAGTGAAGCGTCAACTTAATGATGTTTTTCAAATTTTATTATTTTTAACAATTCCAGCTTGTTT TGGGATTGCGATGCTAGCAAGACCGCTATTTACGGTGTTTTTCTCGCCAAGTGATAACGGTACAGCATTACTACAACTTT TTGCGCCAATCGCTATTTTATTTTCCTTATTTAGCGTATCTGCTGCAGTCCTTCAAGGGATTGATGAACAACGATTTACC GTACTTGGTTTATTACTCGGTTTACTGGCTAAATCAGTTCTTCAAATGCCGCTCATTATGTTATTTGAGGCAAAGGGATC CATTATTGCAACCGGAATTGGCTATGCGGTATCTTGTATTTTCATGCTACTTATTATTAAGAAATATGTTCGTTTTTCGT TCAAAGTTATTTTACGGCGAACGGTACTTTTCTTTGGGATGACGGCTTTAATGGGGCTTGTAGTTATTGCGCTTTATATT ATGATGTCTAACTTTGTATCAACAGACCGGAAAATTCCTGCATTAATGATTACAATCGTTTGCGGCGGGGTAGGTGCAAT TTTCTATGGTTACATGGCATTTAAACTCCACTTATCCGATAAATTATTTGGGCCACGTGGAACGAGACTGCGTGAAAAAT TAAGAATTCGCTAG
Upstream 100 bases:
>100_bases AAGAACAAGCCGATATTTATTTGGGTTTGTTCTTTTTTTTTAAAAGAGTTAATGGTAAAGTAAACAAGGATATATAATTT AATGTAAAGGAAGTTAGACG
Downstream 100 bases:
>100_bases GAGGATTATATGAAAAAAACACCATTTATTATTAGCGGTATCGCTCTCCTTGGATTTATTTTCTTTATGACAGGCGTTAT GACCGGTGCAAAGTGGATTC
Product: transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MGSKLLRGTFILTLGTLISKVLGILYVIPFYAIIGGDEPALLYNFGYVPYQLFLSIATAGIPLAVAKYIAKYNAMEEYAV GRRLFKTGVYLMIFSGIVCFLAMYGLAPTLARMQQLEGGYSLADGIQVIRAVSFALLIIPVMSLLRGFFQGYNSMGPSAV SQVLEQVVRIMFLLAGTFIVMYVLDGNVVTAISIATFSAFVGAFASLLLLLWYFYKRKPGLDRMLLEDRGTVKISIPTLY KDIILSAIPFIIVGSATSLYQLIDQFTLGRVLEYIGITPELVNSYVAIINFDVQKLIMIPGTLAIAFSMALVPLVTGAYV RKEYAQVKRQLNDVFQILLFLTIPACFGIAMLARPLFTVFFSPSDNGTALLQLFAPIAILFSLFSVSAAVLQGIDEQRFT VLGLLLGLLAKSVLQMPLIMLFEAKGSIIATGIGYAVSCIFMLLIIKKYVRFSFKVILRRTVLFFGMTALMGLVVIALYI MMSNFVSTDRKIPALMITIVCGGVGAIFYGYMAFKLHLSDKLFGPRGTRLREKLRIR
Sequences:
>Translated_537_residues MGSKLLRGTFILTLGTLISKVLGILYVIPFYAIIGGDEPALLYNFGYVPYQLFLSIATAGIPLAVAKYIAKYNAMEEYAV GRRLFKTGVYLMIFSGIVCFLAMYGLAPTLARMQQLEGGYSLADGIQVIRAVSFALLIIPVMSLLRGFFQGYNSMGPSAV SQVLEQVVRIMFLLAGTFIVMYVLDGNVVTAISIATFSAFVGAFASLLLLLWYFYKRKPGLDRMLLEDRGTVKISIPTLY KDIILSAIPFIIVGSATSLYQLIDQFTLGRVLEYIGITPELVNSYVAIINFDVQKLIMIPGTLAIAFSMALVPLVTGAYV RKEYAQVKRQLNDVFQILLFLTIPACFGIAMLARPLFTVFFSPSDNGTALLQLFAPIAILFSLFSVSAAVLQGIDEQRFT VLGLLLGLLAKSVLQMPLIMLFEAKGSIIATGIGYAVSCIFMLLIIKKYVRFSFKVILRRTVLFFGMTALMGLVVIALYI MMSNFVSTDRKIPALMITIVCGGVGAIFYGYMAFKLHLSDKLFGPRGTRLREKLRIR >Mature_536_residues GSKLLRGTFILTLGTLISKVLGILYVIPFYAIIGGDEPALLYNFGYVPYQLFLSIATAGIPLAVAKYIAKYNAMEEYAVG RRLFKTGVYLMIFSGIVCFLAMYGLAPTLARMQQLEGGYSLADGIQVIRAVSFALLIIPVMSLLRGFFQGYNSMGPSAVS QVLEQVVRIMFLLAGTFIVMYVLDGNVVTAISIATFSAFVGAFASLLLLLWYFYKRKPGLDRMLLEDRGTVKISIPTLYK DIILSAIPFIIVGSATSLYQLIDQFTLGRVLEYIGITPELVNSYVAIINFDVQKLIMIPGTLAIAFSMALVPLVTGAYVR KEYAQVKRQLNDVFQILLFLTIPACFGIAMLARPLFTVFFSPSDNGTALLQLFAPIAILFSLFSVSAAVLQGIDEQRFTV LGLLLGLLAKSVLQMPLIMLFEAKGSIIATGIGYAVSCIFMLLIIKKYVRFSFKVILRRTVLFFGMTALMGLVVIALYIM MSNFVSTDRKIPALMITIVCGGVGAIFYGYMAFKLHLSDKLFGPRGTRLREKLRIR
Specific function: May play a role in cell division, although it is not essential for growth [H]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential). Note=Localizes at the septum [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002797 [H]
Pfam domain/function: PF01943 Polysacc_synt [H]
EC number: NA
Molecular weight: Translated: 59222; Mature: 59090
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSKLLRGTFILTLGTLISKVLGILYVIPFYAIIGGDEPALLYNFGYVPYQLFLSIATAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCC IPLAVAKYIAKYNAMEEYAVGRRLFKTGVYLMIFSGIVCFLAMYGLAPTLARMQQLEGGY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SLADGIQVIRAVSFALLIIPVMSLLRGFFQGYNSMGPSAVSQVLEQVVRIMFLLAGTFIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH MYVLDGNVVTAISIATFSAFVGAFASLLLLLWYFYKRKPGLDRMLLEDRGTVKISIPTLY HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEHHHHH KDIILSAIPFIIVGSATSLYQLIDQFTLGRVLEYIGITPELVNSYVAIINFDVQKLIMIP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC GTLAIAFSMALVPLVTGAYVRKEYAQVKRQLNDVFQILLFLTIPACFGIAMLARPLFTVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE FSPSDNGTALLQLFAPIAILFSLFSVSAAVLQGIDEQRFTVLGLLLGLLAKSVLQMPLIM ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LFEAKGSIIATGIGYAVSCIFMLLIIKKYVRFSFKVILRRTVLFFGMTALMGLVVIALYI HHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMSNFVSTDRKIPALMITIVCGGVGAIFYGYMAFKLHLSDKLFGPRGTRLREKLRIR HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure GSKLLRGTFILTLGTLISKVLGILYVIPFYAIIGGDEPALLYNFGYVPYQLFLSIATAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCC IPLAVAKYIAKYNAMEEYAVGRRLFKTGVYLMIFSGIVCFLAMYGLAPTLARMQQLEGGY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SLADGIQVIRAVSFALLIIPVMSLLRGFFQGYNSMGPSAVSQVLEQVVRIMFLLAGTFIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH MYVLDGNVVTAISIATFSAFVGAFASLLLLLWYFYKRKPGLDRMLLEDRGTVKISIPTLY HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEHHHHH KDIILSAIPFIIVGSATSLYQLIDQFTLGRVLEYIGITPELVNSYVAIINFDVQKLIMIP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC GTLAIAFSMALVPLVTGAYVRKEYAQVKRQLNDVFQILLFLTIPACFGIAMLARPLFTVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE FSPSDNGTALLQLFAPIAILFSLFSVSAAVLQGIDEQRFTVLGLLLGLLAKSVLQMPLIM ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LFEAKGSIIATGIGYAVSCIFMLLIIKKYVRFSFKVILRRTVLFFGMTALMGLVVIALYI HHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMSNFVSTDRKIPALMITIVCGGVGAIFYGYMAFKLHLSDKLFGPRGTRLREKLRIR HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]