| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is ybjG [C]
Identifier: 226224224
GI number: 226224224
Start: 1649154
End: 1649807
Strand: Reverse
Name: ybjG [C]
Synonym: Lm4b_01634
Alternate gene names: 226224224
Gene position: 1649807-1649154 (Counterclockwise)
Preceding gene: 226224225
Following gene: 226224222
Centisome position: 56.64
GC content: 38.07
Gene sequence:
>654_bases ATGAAAAAAACACCATTTATTATTAGCGGTATCGCTCTCCTTGGATTTATTTTCTTTATGACAGGCGTTATGACCGGTGC AAAGTGGATTCAACATTTTGATGATTATTGGAACAGTATTATCCGTGTAGGCATTACGAATACGAAAACAACGGTGATTT CTTATCTAACGGATATTGGCGGAGTCGCGACCATTTGTATTTTAACAGCAGTCATTGTCGTTATATTTGTTGTCATTCGA AAAGTAGATATGGCGATTTGGTTTGGTGGTATTGTTTTAATTGGTGGAGCACTTATCCCGTCAATTATTAAAAATATCGT TCAACGACCAAGGCCTACGTATAAATTAATCGAACAAGGTGGATTTAGTTTTCCAAGTGGACATTCGACCGGTTCTACGG TATTTTATGGTATGCTTGCTTTCTTGTTAATTCTATACGTGAGCCGCAGATGGCTTCGATTTACAATTGGCATTCTAGCC TTTGGTCTGGTTATTTTCATCATGTATTCGCGTGTTTACTTAGGGGTGCACTTTCCAAGCGATGTGGTTGCAGGATTCTT AATCGGCAATGCAGCACTTTTCAGTGGCATTGGATGTTACTTCATTTGGAATCAAAAATTAGCATTATGGGCGAGTAGAT TTAAAAAAGCATAG
Upstream 100 bases:
>100_bases CTATGGTTACATGGCATTTAAACTCCACTTATCCGATAAATTATTTGGGCCACGTGGAACGAGACTGCGTGAAAAATTAA GAATTCGCTAGGAGGATTAT
Downstream 100 bases:
>100_bases AAAAAAATCCTCTCTTTCAAAAAGGGAGGATTTTTTATTAAGCATGTTCGTCAGTTTCGCTAAAAATTTTCAAGTAAGTC GGTAATTCTTCGGCAATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphoesterase PA-Phosphatase ; PAP2 Family Protein; Phosphoesterase PA-Phosphatase Related Protein; Phospholipid Phosphatase; Phosphoesterase PA-Phosphatase-Like Protein; PAP2 Superfamily Protein; Type 2 Phosphatidic Acid Phosphatase; Phosphoesterase; Phosphatase; PA-Phosphatase-Like Phosphoesterase; Type 2 Phosphatidic Acid Phosphatase Family Protein; Transmembrane Acid Phosphatase; Phosphatidic Acid Phosphatase; SNARE Associated Golgi Protein; PA-Phosphatase-Like Protein; Phosphoesterase PA-Phosphatase-Related Protein; Membrane-Associated Phosphatase; Acid Phosphatase Family Protein; Transmembrane Acid Phosphatase Protein; Phosphatidylglycerophosphatase B; PA-Phosphatase Related Membrane Protein; Integral Membrane Protein; Phosphoesterase Pa-Phosphatase Like Protein; Phosphatidylglycerophosphatase; Membrane Integrated Acid Phosphatase Family Protein; PAP2 Family Phosphatase/Haloperoxidase; PAP2 Family Membrane-Associated Phospholipid Phosphatase; Phosphatidylglycerophosphatase B Homolog
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MKKTPFIISGIALLGFIFFMTGVMTGAKWIQHFDDYWNSIIRVGITNTKTTVISYLTDIGGVATICILTAVIVVIFVVIR KVDMAIWFGGIVLIGGALIPSIIKNIVQRPRPTYKLIEQGGFSFPSGHSTGSTVFYGMLAFLLILYVSRRWLRFTIGILA FGLVIFIMYSRVYLGVHFPSDVVAGFLIGNAALFSGIGCYFIWNQKLALWASRFKKA
Sequences:
>Translated_217_residues MKKTPFIISGIALLGFIFFMTGVMTGAKWIQHFDDYWNSIIRVGITNTKTTVISYLTDIGGVATICILTAVIVVIFVVIR KVDMAIWFGGIVLIGGALIPSIIKNIVQRPRPTYKLIEQGGFSFPSGHSTGSTVFYGMLAFLLILYVSRRWLRFTIGILA FGLVIFIMYSRVYLGVHFPSDVVAGFLIGNAALFSGIGCYFIWNQKLALWASRFKKA >Mature_217_residues MKKTPFIISGIALLGFIFFMTGVMTGAKWIQHFDDYWNSIIRVGITNTKTTVISYLTDIGGVATICILTAVIVVIFVVIR KVDMAIWFGGIVLIGGALIPSIIKNIVQRPRPTYKLIEQGGFSFPSGHSTGSTVFYGMLAFLLILYVSRRWLRFTIGILA FGLVIFIMYSRVYLGVHFPSDVVAGFLIGNAALFSGIGCYFIWNQKLALWASRFKKA
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24096; Mature: 24096
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: PS00962 RIBOSOMAL_S2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTPFIISGIALLGFIFFMTGVMTGAKWIQHFDDYWNSIIRVGITNTKTTVISYLTDIG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GVATICILTAVIVVIFVVIRKVDMAIWFGGIVLIGGALIPSIIKNIVQRPRPTYKLIEQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC GFSFPSGHSTGSTVFYGMLAFLLILYVSRRWLRFTIGILAFGLVIFIMYSRVYLGVHFPS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH DVVAGFLIGNAALFSGIGCYFIWNQKLALWASRFKKA HHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCC >Mature Secondary Structure MKKTPFIISGIALLGFIFFMTGVMTGAKWIQHFDDYWNSIIRVGITNTKTTVISYLTDIG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GVATICILTAVIVVIFVVIRKVDMAIWFGGIVLIGGALIPSIIKNIVQRPRPTYKLIEQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC GFSFPSGHSTGSTVFYGMLAFLLILYVSRRWLRFTIGILAFGLVIFIMYSRVYLGVHFPS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH DVVAGFLIGNAALFSGIGCYFIWNQKLALWASRFKKA HHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA