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The map label for this gene is 226224219

Identifier: 226224219

GI number: 226224219

Start: 1644637

End: 1645077

Strand: Reverse

Name: 226224219

Synonym: Lm4b_01629

Alternate gene names: NA

Gene position: 1645077-1644637 (Counterclockwise)

Preceding gene: 226224220

Following gene: 226224218

Centisome position: 56.48

GC content: 37.19

Gene sequence:

>441_bases
ATGGATGAAAAATTAGTGAAAGAGGTTATTTTCTCTTTTCGCGAAGTACAACGAAAAACACATCACGTGCTTGCAGAAGA
AGCGGCGAATAGGGAGATTACAACAACCCAATTACTTGCAATCAGAGAATTACAAAAAGAATCAGAATTAACACTTGGCG
AATTAGCAGAACGAATGAAGCTTGGTAAAAGTACTGTATCTGGTATTGTAGATCGATTAGTGAAAGCGGGATTTTTAAAA
CGTACAAGAAATGAAAGTAATCGCCGCGCACTCAGCTTAGAATTAACTGAAAAAGGAGCTACAAAAGCAGCAGAAACGTA
TCATGTATTCTTCAACCGTTTAGAACCTATCTTAGAGATTGGCGAAGAAAGGTTAAAAGAAATGCTAGAAATGCACCAAG
AGATTATTACCATTTTAGAAAGGGAAGGTGCACGAGATTGA

Upstream 100 bases:

>100_bases
TGGTTTTAAGCGATTGACAAATTTTTTTGGAGGTGTATAATTCAAAAGGCTAATAGTTCGCATGCGAAATATTTGGGAGC
GAACAATATGGAGGGAAGTC

Downstream 100 bases:

>100_bases
ATATGAAAGCAGCAAGTACATCAGTGAAGCGTAATGGTATTTTGATTGTTATGCTTATGGGCGCCTTTGTTACGATTCTC
AACCAAACGTTGATGAATGT

Product: transcription regulator MarR family

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcription Regulator MarR Family; Regulatory Protein MarR

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MDEKLVKEVIFSFREVQRKTHHVLAEEAANREITTTQLLAIRELQKESELTLGELAERMKLGKSTVSGIVDRLVKAGFLK
RTRNESNRRALSLELTEKGATKAAETYHVFFNRLEPILEIGEERLKEMLEMHQEIITILEREGARD

Sequences:

>Translated_146_residues
MDEKLVKEVIFSFREVQRKTHHVLAEEAANREITTTQLLAIRELQKESELTLGELAERMKLGKSTVSGIVDRLVKAGFLK
RTRNESNRRALSLELTEKGATKAAETYHVFFNRLEPILEIGEERLKEMLEMHQEIITILEREGARD
>Mature_146_residues
MDEKLVKEVIFSFREVQRKTHHVLAEEAANREITTTQLLAIRELQKESELTLGELAERMKLGKSTVSGIVDRLVKAGFLK
RTRNESNRRALSLELTEKGATKAAETYHVFFNRLEPILEIGEERLKEMLEMHQEIITILEREGARD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16875; Mature: 16875

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKLVKEVIFSFREVQRKTHHVLAEEAANREITTTQLLAIRELQKESELTLGELAERMK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LGKSTVSGIVDRLVKAGFLKRTRNESNRRALSLELTEKGATKAAETYHVFFNRLEPILEI
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHH
GEERLKEMLEMHQEIITILEREGARD
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDEKLVKEVIFSFREVQRKTHHVLAEEAANREITTTQLLAIRELQKESELTLGELAERMK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LGKSTVSGIVDRLVKAGFLKRTRNESNRRALSLELTEKGATKAAETYHVFFNRLEPILEI
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHH
GEERLKEMLEMHQEIITILEREGARD
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA