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The map label for this gene is ydaA [C]

Identifier: 226224181

GI number: 226224181

Start: 1606281

End: 1606745

Strand: Direct

Name: ydaA [C]

Synonym: Lm4b_01591

Alternate gene names: 226224181

Gene position: 1606281-1606745 (Clockwise)

Preceding gene: 226224179

Following gene: 226224187

Centisome position: 55.15

GC content: 38.49

Gene sequence:

>465_bases
ATGTTACAACAATACGAAAGAGTTTTAGTAGCAGTTGATGGATCCAAAGAAGCAGAAAGAGCATTCCAAAAAGCAATTCA
AGTGGCTAACCGTAATGACGCGGCGCTTGGTCTGGTACATGTTATCGATACACGCGCGTTTTCATCTGTAGCCAATTACG
ATACAAGCATGGCAGACAAAGCTACCGAATATGCAGATGAATTACTTAGTGGCTATAAAGAAGATGCTTTAAAAGCCGGT
GTAACAAAAGTAGAAAGCTACATTGAGTATGGTTCTCCAAAAACAGCTATTACAAAAGAAGCAGCAAAAGCATTCCAAGC
AGATTTAATCATGTGTGGTGCAACTGGACTTAACGCTGTAGAACGTTTGTTAATTGGTAGTGTATCTGAGTATATTATTC
GCCACTCCCCTTGTGATGTTCTTGTAGTACGTAATGATGTTCCTGATTATAAAGAAGAAAAATAA

Upstream 100 bases:

>100_bases
TTTGTTTCACTATAATTTATTTTTCATTTTATGGTTCTTTTAGGAAAAAGAGGGTAAAATATAAGTATAGAAAATACATA
TTTTGATTGGAGGAATTATT

Downstream 100 bases:

>100_bases
GGATAGAAAAAAAGGCTAGCTCTTAATTAAGAGCTAGCCTTTTTTTCTTTTTTAGTGATTGTTTTTAATTGTTTCTACAT
CACGAGCAATCATTAATTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MLQQYERVLVAVDGSKEAERAFQKAIQVANRNDAALGLVHVIDTRAFSSVANYDTSMADKATEYADELLSGYKEDALKAG
VTKVESYIEYGSPKTAITKEAAKAFQADLIMCGATGLNAVERLLIGSVSEYIIRHSPCDVLVVRNDVPDYKEEK

Sequences:

>Translated_154_residues
MLQQYERVLVAVDGSKEAERAFQKAIQVANRNDAALGLVHVIDTRAFSSVANYDTSMADKATEYADELLSGYKEDALKAG
VTKVESYIEYGSPKTAITKEAAKAFQADLIMCGATGLNAVERLLIGSVSEYIIRHSPCDVLVVRNDVPDYKEEK
>Mature_154_residues
MLQQYERVLVAVDGSKEAERAFQKAIQVANRNDAALGLVHVIDTRAFSSVANYDTSMADKATEYADELLSGYKEDALKAG
VTKVESYIEYGSPKTAITKEAAKAFQADLIMCGATGLNAVERLLIGSVSEYIIRHSPCDVLVVRNDVPDYKEEK

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 16867; Mature: 16867

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQQYERVLVAVDGSKEAERAFQKAIQVANRNDAALGLVHVIDTRAFSSVANYDTSMADK
CCCHHCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
ATEYADELLSGYKEDALKAGVTKVESYIEYGSPKTAITKEAAKAFQADLIMCGATGLNAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCHHHH
ERLLIGSVSEYIIRHSPCDVLVVRNDVPDYKEEK
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MLQQYERVLVAVDGSKEAERAFQKAIQVANRNDAALGLVHVIDTRAFSSVANYDTSMADK
CCCHHCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
ATEYADELLSGYKEDALKAGVTKVESYIEYGSPKTAITKEAAKAFQADLIMCGATGLNAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCHHHH
ERLLIGSVSEYIIRHSPCDVLVVRNDVPDYKEEK
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA