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The map label for this gene is 226224104

Identifier: 226224104

GI number: 226224104

Start: 1515831

End: 1516103

Strand: Reverse

Name: 226224104

Synonym: Lm4b_01513

Alternate gene names: NA

Gene position: 1516103-1515831 (Counterclockwise)

Preceding gene: 226224105

Following gene: 226224103

Centisome position: 52.05

GC content: 34.8

Gene sequence:

>273_bases
ATGGATTCAAAAGATCAAACAATGTTTTACAACTTCGGCGATGATTCAATTGAAGAAGATGTAAAAAAATTAATGAAACA
AGTCTACGTTGCTCTTGAAGAAAAAGGCTATAATCCCGTAAATCAAATCGTTGGCTATTTACTTTCAGGCGATCCAGCTT
ATATTCCTCGTCACAAGGATGCTAGAAGTATGATACGTCGTTTAGAACGAGATGAAATTATCGAGGAACTTGTCAAAGCG
TATCTGAAAAATAACGAAATTGGTGAGAAATGA

Upstream 100 bases:

>100_bases
CAAGCATAAATTTCATCAAAGTGCCTCATTTTTCTTTGTTATTTCCGTTCACATAGTGTAAAATGAAAGGAGATACATGA
AGGAATGAGGTGCTTCGATT

Downstream 100 bases:

>100_bases
GAATAATGGGTTTAGATGTCGGCTCGAAAACAGTCGGCGTAGCGATAAGTGATCCACTTGGTTGGACCGCACAAGGTGTG
GAAACCATTCAGATTGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MDSKDQTMFYNFGDDSIEEDVKKLMKQVYVALEEKGYNPVNQIVGYLLSGDPAYIPRHKDARSMIRRLERDEIIEELVKA
YLKNNEIGEK

Sequences:

>Translated_90_residues
MDSKDQTMFYNFGDDSIEEDVKKLMKQVYVALEEKGYNPVNQIVGYLLSGDPAYIPRHKDARSMIRRLERDEIIEELVKA
YLKNNEIGEK
>Mature_90_residues
MDSKDQTMFYNFGDDSIEEDVKKLMKQVYVALEEKGYNPVNQIVGYLLSGDPAYIPRHKDARSMIRRLERDEIIEELVKA
YLKNNEIGEK

Specific function: Unknown

COG id: COG4472

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0297 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1066_LISMH (B8DE07)

Other databases:

- EMBL:   CP001175
- RefSeq:   YP_002350028.1
- GeneID:   7079999
- GenomeReviews:   CP001175_GR
- KEGG:   lmh:LMHCC_1066
- HOGENOM:   HBG304642
- OMA:   KTMKFNF
- ProtClustDB:   PRK05473
- HAMAP:   MF_01507
- InterPro:   IPR009309
- PIRSF:   PIRSF037258

Pfam domain/function: PF06135 DUF965

EC number: NA

Molecular weight: Translated: 10544; Mature: 10544

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSKDQTMFYNFGDDSIEEDVKKLMKQVYVALEEKGYNPVNQIVGYLLSGDPAYIPRHKD
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC
ARSMIRRLERDEIIEELVKAYLKNNEIGEK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDSKDQTMFYNFGDDSIEEDVKKLMKQVYVALEEKGYNPVNQIVGYLLSGDPAYIPRHKD
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC
ARSMIRRLERDEIIEELVKAYLKNNEIGEK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA