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The map label for this gene is yqfF [H]

Identifier: 226224067

GI number: 226224067

Start: 1481788

End: 1483944

Strand: Reverse

Name: yqfF [H]

Synonym: Lm4b_01476

Alternate gene names: 226224067

Gene position: 1483944-1481788 (Counterclockwise)

Preceding gene: 226224068

Following gene: 226224066

Centisome position: 50.95

GC content: 35.47

Gene sequence:

>2157_bases
GTGAAACTAGCCAAGAAATGGAGAGATTGGTACATCGAAAGTGGAAAGAAATACCTTTTTCCGCTGCTCCTTGTTTGCTT
TGCAGTTGTAGCTTATTTTCTCGTTTGCCAAATGACGAAACCGGAATCTTACAATGTTAAACTATTCCAGGTGGCTGAAA
AAACAATTCGTTCACCTCAAACGGTGGAAGATACAGAAAAAACAAAAGAAGAAAGAACCAAAGCAAGCGATGCTGTAGAA
GATGTGTATGTCTACAATCGCGAAACTGGTCAAAACCGAGTAGCACTTATCCAAAGTTTATTTGCCTATGTAAATGAAGT
AAACGCAGAAGCGCAAGAAAAAGATACCAAGAATAAAGAGAAAGCAAAAAAAGAGAATAAGCCTGCTCCTGCGCCAACAT
CAACTGAAGATAAATTAAAAAACTTAAAAGACAAATTATCTAGTAACGTATCTGAAAAAATAACTTCTAACATATCTGAC
GAAGTTTTCACTACTTTAATCGAAGCGAAAAGTAAAGATTTTAATGTCATGGAAGACGTGGTTACAACAGAAGTTGAAAA
ATCCATGGAAAATAAAATCCGAGATGAAAACTTGAATTCTGTAAAAATTAGAGCTCGTGATGATATTGAACTTTCAGCGA
TACCCGCTTACTACAAAAATGTCTCAAAAGCCTTAGTTTCCTATGCTATCGTACCGAATGAAGTTTACGATGAAGAGCAG
ACCGATGCACGACGTAAAGAAGCTGCGCAATCCGTTGTTCCTGTGAAAATCTTACAAGGGCAAGTTATTGTTCAAGAAGG
CCAAATTGTAGATAGAGAAACATATCGTCAGCTAAAAATGCTACATTTACTTGATCAAAAAATGCCTGTAAAACAATACG
CTGGATTTGCGATTTTCATTATTGCTTTAGCAGCAATTCTATTCCTTTACACGAAAAAACAAACACAACCTAAAGCGAAA
AAAATGCAGACGATGCTTATTTTTTCTTCGGTTTATCTTGTTTCTTTGTTTATGTTATTAATTATTTTATTTTTAGAAAC
GCAAAATATCGCGAATATTGCTTTCTTATTCCCAGCCGCCTTTGCCCCGATGATACTCAAAATTTTACTCAATGAGAAAT
ATGCCTTTTTAAGCGTCATTTTTATTGCTGTAACTAGTTTGTTAACATTTCAAAATGATGCTACAAGCGGCATAACTATT
TTTATTTTATTGAGTGGCGCGACGAGTGTTGTTGTGTTACGCGATTATAGTAGACGTTCGGCTATTATGTTGTCTGGGTT
TATGGTTGGTTTAATTAATATGGTTTATGTGTTACTTTTATTATTAATAAATAACAGCACACTGTTGCAAGTTTCTACAC
TAATGGCCATTGGATATGCCTTTTTAGGTGGATTTGGCGCATTTATTCTCGGAGTAGGAGTTATTCCGTTATTCGAAACG
ATTTTTGGATTGTTAACAACGAGTCGTTTGGTCGAATTAGCTAATCCAAACCATCCATTATTGAAGAAAATATTAATGAA
AGCTCCTGGTACGTATCATCATAGTATGATGGTAGCTAACTTAGCAGAAGCATGCGCTGACAAAATTGGTGCCAATAGTT
TACTTGTTCGTGTTGGCTGTTTTTATCATGATATAGGAAAAACATTAAGACCACCTTATTTTGTGGAAAATCAATTGCAA
GGAATAAATCCGCACGATAGACTGACACCAGAACAAAGTCGTGATATAATTCTTTCGCATACAAAAGACGGAGCAGAGAT
TTTAAAAGAAAATCATATGCCACAACCAATTATTGATATCGCACTCCAACATCACGGGACGACACTGCTTAAATATTTCT
ATTTTAAAGCGAAAGAAACAAATCCAGATGTGAAAGAGGCGGATTATCGTTACAGTGGTCCAAAGCCACAAACGAAAGAA
ATCGCCATTATCAATATATCGGATAGTGTTGAAGCGGCAGTTCGTTCTTCCACAGAGCCAACCATGGCAAAAATAACAGA
AATTATTGACGGAATCATTAAAGATCGTTTCCTTGATGGGCAATTTACAGAATGTGATATTACAATACAAGAAATTAAAA
TCATTCGTGACACCTTAATCGCCACATTAAATGGAATATATCATCAACGAATTCAATATCCTGATGACAAAGATTGA

Upstream 100 bases:

>100_bases
TTTTGTTTACTTTGAACATCATGATGTAGTCAGACACCCACTCGTTGCTGAAATTATTAAAGCTTATGAAGGGAAACAAA
ATTAGAGAGGAGACAAAGAT

Downstream 100 bases:

>100_bases
AATAGGAGGACAAAAGATGACGGTCTTAGAAATTGATTTACTAGACGAAACCAAGAATTTACTTGATGAAGATAAACAGC
TAGTTGAAAATATTTTACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 718; Mature: 718

Protein sequence:

>718_residues
MKLAKKWRDWYIESGKKYLFPLLLVCFAVVAYFLVCQMTKPESYNVKLFQVAEKTIRSPQTVEDTEKTKEERTKASDAVE
DVYVYNRETGQNRVALIQSLFAYVNEVNAEAQEKDTKNKEKAKKENKPAPAPTSTEDKLKNLKDKLSSNVSEKITSNISD
EVFTTLIEAKSKDFNVMEDVVTTEVEKSMENKIRDENLNSVKIRARDDIELSAIPAYYKNVSKALVSYAIVPNEVYDEEQ
TDARRKEAAQSVVPVKILQGQVIVQEGQIVDRETYRQLKMLHLLDQKMPVKQYAGFAIFIIALAAILFLYTKKQTQPKAK
KMQTMLIFSSVYLVSLFMLLIILFLETQNIANIAFLFPAAFAPMILKILLNEKYAFLSVIFIAVTSLLTFQNDATSGITI
FILLSGATSVVVLRDYSRRSAIMLSGFMVGLINMVYVLLLLLINNSTLLQVSTLMAIGYAFLGGFGAFILGVGVIPLFET
IFGLLTTSRLVELANPNHPLLKKILMKAPGTYHHSMMVANLAEACADKIGANSLLVRVGCFYHDIGKTLRPPYFVENQLQ
GINPHDRLTPEQSRDIILSHTKDGAEILKENHMPQPIIDIALQHHGTTLLKYFYFKAKETNPDVKEADYRYSGPKPQTKE
IAIINISDSVEAAVRSSTEPTMAKITEIIDGIIKDRFLDGQFTECDITIQEIKIIRDTLIATLNGIYHQRIQYPDDKD

Sequences:

>Translated_718_residues
MKLAKKWRDWYIESGKKYLFPLLLVCFAVVAYFLVCQMTKPESYNVKLFQVAEKTIRSPQTVEDTEKTKEERTKASDAVE
DVYVYNRETGQNRVALIQSLFAYVNEVNAEAQEKDTKNKEKAKKENKPAPAPTSTEDKLKNLKDKLSSNVSEKITSNISD
EVFTTLIEAKSKDFNVMEDVVTTEVEKSMENKIRDENLNSVKIRARDDIELSAIPAYYKNVSKALVSYAIVPNEVYDEEQ
TDARRKEAAQSVVPVKILQGQVIVQEGQIVDRETYRQLKMLHLLDQKMPVKQYAGFAIFIIALAAILFLYTKKQTQPKAK
KMQTMLIFSSVYLVSLFMLLIILFLETQNIANIAFLFPAAFAPMILKILLNEKYAFLSVIFIAVTSLLTFQNDATSGITI
FILLSGATSVVVLRDYSRRSAIMLSGFMVGLINMVYVLLLLLINNSTLLQVSTLMAIGYAFLGGFGAFILGVGVIPLFET
IFGLLTTSRLVELANPNHPLLKKILMKAPGTYHHSMMVANLAEACADKIGANSLLVRVGCFYHDIGKTLRPPYFVENQLQ
GINPHDRLTPEQSRDIILSHTKDGAEILKENHMPQPIIDIALQHHGTTLLKYFYFKAKETNPDVKEADYRYSGPKPQTKE
IAIINISDSVEAAVRSSTEPTMAKITEIIDGIIKDRFLDGQFTECDITIQEIKIIRDTLIATLNGIYHQRIQYPDDKD
>Mature_718_residues
MKLAKKWRDWYIESGKKYLFPLLLVCFAVVAYFLVCQMTKPESYNVKLFQVAEKTIRSPQTVEDTEKTKEERTKASDAVE
DVYVYNRETGQNRVALIQSLFAYVNEVNAEAQEKDTKNKEKAKKENKPAPAPTSTEDKLKNLKDKLSSNVSEKITSNISD
EVFTTLIEAKSKDFNVMEDVVTTEVEKSMENKIRDENLNSVKIRARDDIELSAIPAYYKNVSKALVSYAIVPNEVYDEEQ
TDARRKEAAQSVVPVKILQGQVIVQEGQIVDRETYRQLKMLHLLDQKMPVKQYAGFAIFIIALAAILFLYTKKQTQPKAK
KMQTMLIFSSVYLVSLFMLLIILFLETQNIANIAFLFPAAFAPMILKILLNEKYAFLSVIFIAVTSLLTFQNDATSGITI
FILLSGATSVVVLRDYSRRSAIMLSGFMVGLINMVYVLLLLLINNSTLLQVSTLMAIGYAFLGGFGAFILGVGVIPLFET
IFGLLTTSRLVELANPNHPLLKKILMKAPGTYHHSMMVANLAEACADKIGANSLLVRVGCFYHDIGKTLRPPYFVENQLQ
GINPHDRLTPEQSRDIILSHTKDGAEILKENHMPQPIIDIALQHHGTTLLKYFYFKAKETNPDVKEADYRYSGPKPQTKE
IAIINISDSVEAAVRSSTEPTMAKITEIIDGIIKDRFLDGQFTECDITIQEIKIIRDTLIATLNGIYHQRIQYPDDKD

Specific function: Unknown

COG id: COG1480

COG function: function code R; Predicted membrane-associated HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011624
- InterPro:   IPR011621
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]

EC number: NA

Molecular weight: Translated: 81019; Mature: 81019

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLAKKWRDWYIESGKKYLFPLLLVCFAVVAYFLVCQMTKPESYNVKLFQVAEKTIRSPQ
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCC
TVEDTEKTKEERTKASDAVEDVYVYNRETGQNRVALIQSLFAYVNEVNAEAQEKDTKNKE
CCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHH
KAKKENKPAPAPTSTEDKLKNLKDKLSSNVSEKITSNISDEVFTTLIEAKSKDFNVMEDV
HHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHH
VTTEVEKSMENKIRDENLNSVKIRARDDIELSAIPAYYKNVSKALVSYAIVPNEVYDEEQ
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHCCCHH
TDARRKEAAQSVVPVKILQGQVIVQEGQIVDRETYRQLKMLHLLDQKMPVKQYAGFAIFI
HHHHHHHHHHHCCCHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHH
IALAAILFLYTKKQTQPKAKKMQTMLIFSSVYLVSLFMLLIILFLETQNIANIAFLFPAA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FAPMILKILLNEKYAFLSVIFIAVTSLLTFQNDATSGITIFILLSGATSVVVLRDYSRRS
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCH
AIMLSGFMVGLINMVYVLLLLLINNSTLLQVSTLMAIGYAFLGGFGAFILGVGVIPLFET
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFGLLTTSRLVELANPNHPLLKKILMKAPGTYHHSMMVANLAEACADKIGANSLLVRVGC
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FYHDIGKTLRPPYFVENQLQGINPHDRLTPEQSRDIILSHTKDGAEILKENHMPQPIIDI
HHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCHHHHH
ALQHHGTTLLKYFYFKAKETNPDVKEADYRYSGPKPQTKEIAIINISDSVEAAVRSSTEP
HHHHCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCH
TMAKITEIIDGIIKDRFLDGQFTECDITIQEIKIIRDTLIATLNGIYHQRIQYPDDKD
HHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKLAKKWRDWYIESGKKYLFPLLLVCFAVVAYFLVCQMTKPESYNVKLFQVAEKTIRSPQ
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCC
TVEDTEKTKEERTKASDAVEDVYVYNRETGQNRVALIQSLFAYVNEVNAEAQEKDTKNKE
CCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHH
KAKKENKPAPAPTSTEDKLKNLKDKLSSNVSEKITSNISDEVFTTLIEAKSKDFNVMEDV
HHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHH
VTTEVEKSMENKIRDENLNSVKIRARDDIELSAIPAYYKNVSKALVSYAIVPNEVYDEEQ
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHCCCHH
TDARRKEAAQSVVPVKILQGQVIVQEGQIVDRETYRQLKMLHLLDQKMPVKQYAGFAIFI
HHHHHHHHHHHCCCHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHH
IALAAILFLYTKKQTQPKAKKMQTMLIFSSVYLVSLFMLLIILFLETQNIANIAFLFPAA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FAPMILKILLNEKYAFLSVIFIAVTSLLTFQNDATSGITIFILLSGATSVVVLRDYSRRS
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCH
AIMLSGFMVGLINMVYVLLLLLINNSTLLQVSTLMAIGYAFLGGFGAFILGVGVIPLFET
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFGLLTTSRLVELANPNHPLLKKILMKAPGTYHHSMMVANLAEACADKIGANSLLVRVGC
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FYHDIGKTLRPPYFVENQLQGINPHDRLTPEQSRDIILSHTKDGAEILKENHMPQPIIDI
HHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCHHHHH
ALQHHGTTLLKYFYFKAKETNPDVKEADYRYSGPKPQTKEIAIINISDSVEAAVRSSTEP
HHHHCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCH
TMAKITEIIDGIIKDRFLDGQFTECDITIQEIKIIRDTLIATLNGIYHQRIQYPDDKD
HHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]