| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is phoH [H]
Identifier: 226224068
GI number: 226224068
Start: 1483960
End: 1484919
Strand: Reverse
Name: phoH [H]
Synonym: Lm4b_01477
Alternate gene names: 226224068
Gene position: 1484919-1483960 (Counterclockwise)
Preceding gene: 226224069
Following gene: 226224067
Centisome position: 50.98
GC content: 36.88
Gene sequence:
>960_bases ATGCTAAATGAATTTAATGAAGTAGTCGAATTATCTGATGACACAAATATTCAAGATTTATTCGGCAATAATAATAAGAA TATCGAACTTTTAGAAGAGTTACTTCAAGTGAAAATCATTACTCGGGGAGAGTCACTATCTATTACAGGCGAGGAAGAGC CTGTACAGCATACGACTGCCGTTTTAAATGAACTTATTTTGACGGTAAAACGAGGTATTCATATTGATGGTCGAGATATC GCTCAAGCGGTAAAAATGCAAAGAAACGGAACACTTATTTACTTTCATACCTTATTTGAAGAAGAAATTACGAAGAATGC AAAAGGAATGCCAATTAGGCCAAAAACATTCGGACAAAGAACTTATATTCAAATGATTAAAAAACATGACATCGTTTTCG GCGTTGGTCCAGCAGGTACTGGTAAAACCTATCTAGCAGTAGTTATGGCAGTAGATGCATGGAAAAAAGGAAATGTGAGC AAAATCATTTTAACAAGACCTGCCGTTGAAGCTGGCGAAAGTTTAGGTTTTTTGCCTGGAGATCTAAAAGAAAAAGTAGA TCCTTATCTACGCCCTGTGTACGACGCGTTATATGACATTTTTGGTACAGAGCATACAACAAGGTTAATGGACCGAGGCG TCATTGAAATAGCTCCTCTGGCTTATATGCGTGGACGTACACTTGATCATGCCTTTGTTATTTTAGACGAGGCGCAGAAT ACGACCATTGCCCAAATGAAAATGTTTTTAACACGACTTGGTTATGACTCCAAAATGATTGTCAATGGAGATATGACACA AATTGACTTACCAAAAGGTGCAACTAGCGGTCTTGTCAATGCAGAACAAGTTTTAAAAGATGTAAAAGATATCGGTTTTG TTTACTTTGAACATCATGATGTAGTCAGACACCCACTCGTTGCTGAAATTATTAAAGCTTATGAAGGGAAACAAAATTAG
Upstream 100 bases:
>100_bases CTTGAATTGCGTTGTTGCTATCGCTTCGTTTTTCAAGCAAGGCAATTTCGTGTATAATATAACTAATCAAGGCACTTATA ACAGGTGAAGGGGTTAGCCA
Downstream 100 bases:
>100_bases AGAGGAGACAAAGATGTGAAACTAGCCAAGAAATGGAGAGATTGGTACATCGAAAGTGGAAAGAAATACCTTTTTCCGCT GCTCCTTGTTTGCTTTGCAG
Product: phosphate starvation induced protein PhoH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MLNEFNEVVELSDDTNIQDLFGNNNKNIELLEELLQVKIITRGESLSITGEEEPVQHTTAVLNELILTVKRGIHIDGRDI AQAVKMQRNGTLIYFHTLFEEEITKNAKGMPIRPKTFGQRTYIQMIKKHDIVFGVGPAGTGKTYLAVVMAVDAWKKGNVS KIILTRPAVEAGESLGFLPGDLKEKVDPYLRPVYDALYDIFGTEHTTRLMDRGVIEIAPLAYMRGRTLDHAFVILDEAQN TTIAQMKMFLTRLGYDSKMIVNGDMTQIDLPKGATSGLVNAEQVLKDVKDIGFVYFEHHDVVRHPLVAEIIKAYEGKQN
Sequences:
>Translated_319_residues MLNEFNEVVELSDDTNIQDLFGNNNKNIELLEELLQVKIITRGESLSITGEEEPVQHTTAVLNELILTVKRGIHIDGRDI AQAVKMQRNGTLIYFHTLFEEEITKNAKGMPIRPKTFGQRTYIQMIKKHDIVFGVGPAGTGKTYLAVVMAVDAWKKGNVS KIILTRPAVEAGESLGFLPGDLKEKVDPYLRPVYDALYDIFGTEHTTRLMDRGVIEIAPLAYMRGRTLDHAFVILDEAQN TTIAQMKMFLTRLGYDSKMIVNGDMTQIDLPKGATSGLVNAEQVLKDVKDIGFVYFEHHDVVRHPLVAEIIKAYEGKQN >Mature_319_residues MLNEFNEVVELSDDTNIQDLFGNNNKNIELLEELLQVKIITRGESLSITGEEEPVQHTTAVLNELILTVKRGIHIDGRDI AQAVKMQRNGTLIYFHTLFEEEITKNAKGMPIRPKTFGQRTYIQMIKKHDIVFGVGPAGTGKTYLAVVMAVDAWKKGNVS KIILTRPAVEAGESLGFLPGDLKEKVDPYLRPVYDALYDIFGTEHTTRLMDRGVIEIAPLAYMRGRTLDHAFVILDEAQN TTIAQMKMFLTRLGYDSKMIVNGDMTQIDLPKGATSGLVNAEQVLKDVKDIGFVYFEHHDVVRHPLVAEIIKAYEGKQN
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=322, Percent_Identity=48.1366459627329, Blast_Score=275, Evalue=3e-75, Organism=Escherichia coli, GI1787257, Length=207, Percent_Identity=46.8599033816425, Blast_Score=195, Evalue=4e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 35815; Mature: 35815
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNEFNEVVELSDDTNIQDLFGNNNKNIELLEELLQVKIITRGESLSITGEEEPVQHTTA CCCCHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHEEEEECCCEEEECCCCCHHHHHHH VLNELILTVKRGIHIDGRDIAQAVKMQRNGTLIYFHTLFEEEITKNAKGMPIRPKTFGQR HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCCHHCCHH TYIQMIKKHDIVFGVGPAGTGKTYLAVVMAVDAWKKGNVSKIILTRPAVEAGESLGFLPG HHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHCCCCCCCCCC DLKEKVDPYLRPVYDALYDIFGTEHTTRLMDRGVIEIAPLAYMRGRTLDHAFVILDEAQN HHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEHHHHHCCCCCCEEEEEEECCCC TTIAQMKMFLTRLGYDSKMIVNGDMTQIDLPKGATSGLVNAEQVLKDVKDIGFVYFEHHD CHHHHHHHHHHHCCCCCEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHCCEEEEECCH VVRHPLVAEIIKAYEGKQN HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLNEFNEVVELSDDTNIQDLFGNNNKNIELLEELLQVKIITRGESLSITGEEEPVQHTTA CCCCHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHEEEEECCCEEEECCCCCHHHHHHH VLNELILTVKRGIHIDGRDIAQAVKMQRNGTLIYFHTLFEEEITKNAKGMPIRPKTFGQR HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCCHHCCHH TYIQMIKKHDIVFGVGPAGTGKTYLAVVMAVDAWKKGNVSKIILTRPAVEAGESLGFLPG HHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHCCCCCCCCCC DLKEKVDPYLRPVYDALYDIFGTEHTTRLMDRGVIEIAPLAYMRGRTLDHAFVILDEAQN HHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEHHHHHCCCCCCEEEEEEECCCC TTIAQMKMFLTRLGYDSKMIVNGDMTQIDLPKGATSGLVNAEQVLKDVKDIGFVYFEHHD CHHHHHHHHHHHCCCCCEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHCCEEEEECCH VVRHPLVAEIIKAYEGKQN HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]