Click here to switch to the map view.

The map label for this gene is glyQ

Identifier: 226224060

GI number: 226224060

Start: 1476840

End: 1477730

Strand: Reverse

Name: glyQ

Synonym: Lm4b_01469

Alternate gene names: 226224060

Gene position: 1477730-1476840 (Counterclockwise)

Preceding gene: 226224061

Following gene: 226224059

Centisome position: 50.73

GC content: 39.84

Gene sequence:

>891_bases
ATGAATTTACAAACAATGATTAGAACATTACAAGATTATTGGTCCGAACAAGGTTGTATTATGTTGCAATCGTATGATGT
GGAAAAAGGTGCTGGCACAATGAGTCCGTATACTTTCTTAAAAGCAATTGGTCCAGAGCCGTGGAAAGCGGGTTACGTAG
AGCCGTCGCGTCGTCCTGCTGATGGTCGTTACGGAGAAAATCCAAACAGATTATTCCAACATCACCAATTTCAAGTAGTG
ATGAAGCCTTCTCCTGACAATATTCAAGAGCTTTACCTAGGTTCTTTAGAAAAATTAGGTATCAATCCGTTAGAACATGA
TATCCGTTTTGTAGAGGATAACTGGGAGAATCCATCTCTTGGTTGTGCGGGCCTTGGTTGGGAAGTATGGTTAGATGGAA
TGGAAATCACACAATTCACTTATTTCCAACAAGTAGGTGGCTTAGAATGTTTCCCTGTTACTTCCGAAATCACTTACGGT
GTGGAACGTTTAGCAAGCTATATTCAAGATAAAGAGAATGTATTTGATTTAGAATGGACAGAAGGTATTAGCTACCGTGA
TATTTTCTTCCAAGCAGAATTCGAAAACTCGACATATGCTTTTGAAACTTCGAATACAGATATGCTGTTGACACTTTTTG
ACACATATGAAAGAGAAGCCACTCGCCAAATGCAAGACGGCCTTGTTTTCCCAGCATATGATTACGTATTGAAATGTTCG
CATACGTTTAACTTACTAGATGCTCGCGGCGTTGTTTCAGTAACTGAACGCGCACAGTATATCGGTCGTATCAGAAACTT
AGCAAGACGTATCGCCAAAACATTTTATGAATCACGAGAAAAACTTGGCTTCCCATTAGTCAAAGAAGAGGGAGGAAAAC
GTCATGAGTAA

Upstream 100 bases:

>100_bases
GGGTGGAACCGCGAGCTAACTCTCGTCCCTATATGCTTTAAATCAGCATATAGGGACGAGAGTTTTTATATTGGCTGAAT
TATTTTTGGAGGTGGAAGCA

Downstream 100 bases:

>100_bases
AGACTTTTTATTAGAAATTGGTTTAGAAGAAATGCCAGCAAAATATGTGACTAGCTCTGTACTACAACTGGAAAAACGAG
TAACTGATTGGTTAAAAGAC

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MNLQTMIRTLQDYWSEQGCIMLQSYDVEKGAGTMSPYTFLKAIGPEPWKAGYVEPSRRPADGRYGENPNRLFQHHQFQVV
MKPSPDNIQELYLGSLEKLGINPLEHDIRFVEDNWENPSLGCAGLGWEVWLDGMEITQFTYFQQVGGLECFPVTSEITYG
VERLASYIQDKENVFDLEWTEGISYRDIFFQAEFENSTYAFETSNTDMLLTLFDTYEREATRQMQDGLVFPAYDYVLKCS
HTFNLLDARGVVSVTERAQYIGRIRNLARRIAKTFYESREKLGFPLVKEEGGKRHE

Sequences:

>Translated_296_residues
MNLQTMIRTLQDYWSEQGCIMLQSYDVEKGAGTMSPYTFLKAIGPEPWKAGYVEPSRRPADGRYGENPNRLFQHHQFQVV
MKPSPDNIQELYLGSLEKLGINPLEHDIRFVEDNWENPSLGCAGLGWEVWLDGMEITQFTYFQQVGGLECFPVTSEITYG
VERLASYIQDKENVFDLEWTEGISYRDIFFQAEFENSTYAFETSNTDMLLTLFDTYEREATRQMQDGLVFPAYDYVLKCS
HTFNLLDARGVVSVTERAQYIGRIRNLARRIAKTFYESREKLGFPLVKEEGGKRHE
>Mature_296_residues
MNLQTMIRTLQDYWSEQGCIMLQSYDVEKGAGTMSPYTFLKAIGPEPWKAGYVEPSRRPADGRYGENPNRLFQHHQFQVV
MKPSPDNIQELYLGSLEKLGINPLEHDIRFVEDNWENPSLGCAGLGWEVWLDGMEITQFTYFQQVGGLECFPVTSEITYG
VERLASYIQDKENVFDLEWTEGISYRDIFFQAEFENSTYAFETSNTDMLLTLFDTYEREATRQMQDGLVFPAYDYVLKCS
HTFNLLDARGVVSVTERAQYIGRIRNLARRIAKTFYESREKLGFPLVKEEGGKRHE

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=295, Percent_Identity=61.0169491525424, Blast_Score=382, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 34316; Mature: 34316

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLQTMIRTLQDYWSEQGCIMLQSYDVEKGAGTMSPYTFLKAIGPEPWKAGYVEPSRRPA
CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
DGRYGENPNRLFQHHQFQVVMKPSPDNIQELYLGSLEKLGINPLEHDIRFVEDNWENPSL
CCCCCCCHHHHHHCCEEEEEECCCCCCHHHHHHCCHHHCCCCHHHHHHEEEECCCCCCCC
GCAGLGWEVWLDGMEITQFTYFQQVGGLECFPVTSEITYGVERLASYIQDKENVFDLEWT
CCCCCCHHHEECCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCCEEEEECC
EGISYRDIFFQAEFENSTYAFETSNTDMLLTLFDTYEREATRQMQDGLVFPAYDYVLKCS
CCCCEEEEEEEEEECCCEEEEECCCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHEECC
HTFNLLDARGVVSVTERAQYIGRIRNLARRIAKTFYESREKLGFPLVKEEGGKRHE
CHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNLQTMIRTLQDYWSEQGCIMLQSYDVEKGAGTMSPYTFLKAIGPEPWKAGYVEPSRRPA
CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
DGRYGENPNRLFQHHQFQVVMKPSPDNIQELYLGSLEKLGINPLEHDIRFVEDNWENPSL
CCCCCCCHHHHHHCCEEEEEECCCCCCHHHHHHCCHHHCCCCHHHHHHEEEECCCCCCCC
GCAGLGWEVWLDGMEITQFTYFQQVGGLECFPVTSEITYGVERLASYIQDKENVFDLEWT
CCCCCCHHHEECCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCCEEEEECC
EGISYRDIFFQAEFENSTYAFETSNTDMLLTLFDTYEREATRQMQDGLVFPAYDYVLKCS
CCCCEEEEEEEEEECCCEEEEECCCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHEECC
HTFNLLDARGVVSVTERAQYIGRIRNLARRIAKTFYESREKLGFPLVKEEGGKRHE
CHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]