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The map label for this gene is ydbI [H]

Identifier: 226224020

GI number: 226224020

Start: 1433340

End: 1434377

Strand: Reverse

Name: ydbI [H]

Synonym: Lm4b_01428

Alternate gene names: 226224020

Gene position: 1434377-1433340 (Counterclockwise)

Preceding gene: 226224021

Following gene: 226224019

Centisome position: 49.25

GC content: 32.85

Gene sequence:

>1038_bases
TTGAAAGAGCTTAGTTCATTTTTACAAAATCGTAGTGTGCGGCGAGTTGGCGTATTTATATTAATTGCCTTCGTTTTATA
CTTATTAAGAAGCCAAATGAATATTATTTTACTAACATTCATTTTTTCTTACCTTATTACACGTTTAGAGAATTTTATTT
TACGGAGAATCTCCATTTATCGGCAAATTATTGTGTTGTTACTTTATGTTTTAATCGCCGCAGTTATCATCTTCGTATTT
GTTAAGTACATTCCTGTCTTAGCGGATCAAATAAATCAACTAGTGAAATTCGGAAATACTTTCTTAACGACAGATAGCAA
CAATGACTTCATTAATTACATTGTTAGTTTAGCGAATCAATTTGATATTATGAAATACACAGAACAGGGTGTTTCAATGA
TATTAACTTATTTAACTAATGTGGGAACTGTATTGATGAACGTCTTTATCGCACTAATGTTAAGTCTATTTTTCTCACTA
GGAAAAGAACATTTAGTTTCATTCACGAATCAATTTTCTACTAGTAAAATTGGTTTTATCTATGAAGAAGTGAAGTTCTT
TGGATCCAAATTTGTTGCTACTTTTGGTAAAGTTATTGAAGCACAATTTATCATTGCGCTTGTGAATGCCATTTTAACGA
CGATAGCACTTTGGATTTTAGGTTTCCCGCAATTGATGACTTTATCCATAATGGTGTTTTTGCTTGGTTTGATTCCAGTG
GCAGGGGTGATTATTTCTCTTGTCCCGTTAACTATCATTGGTTATTCTATCGGCGGCGTGGAATACATTTTCTACATTTT
AGTCGTTGTTATTATTATCCATGCACTCGAATCTTATGTCCTTAATCCAAAACTTATGTCAGCGAAAACAAATTTACCAG
TTTTTTATACTTTCATTATTCTTATTTTCGGAGAGCATTTCTTCGGTATTTGGGGATTAATCGTTGGTATTCCAGTTGTG
ATGTTCTTCTTAGATGTGCTCGGCGTTACGAATCAAGAAGAAATCGAACAGCCAAAGGACACAATCAGTCATACGTAA

Upstream 100 bases:

>100_bases
ATTGCTTACGTCCAACAAACGGTTCGCGAGAAATTTGATGTAGAGTTAGAAACAGAAGTTAAAATCATAGGCGAAGATAA
ATAGAGGAGGGCATCCATTT

Downstream 100 bases:

>100_bases
TTCACACGGGGGTTCTTCCAGATTTTCTGGAAAATCCCTGTTTTTTTGAAGGGGGAGAAAATAATGGAAAAACATCTTTT
TGTGATTTCATTAGACGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MKELSSFLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVLLLYVLIAAVIIFVF
VKYIPVLADQINQLVKFGNTFLTTDSNNDFINYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSL
GKEHLVSFTNQFSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAILTTIALWILGFPQLMTLSIMVFLLGLIPV
AGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNPKLMSAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVV
MFFLDVLGVTNQEEIEQPKDTISHT

Sequences:

>Translated_345_residues
MKELSSFLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVLLLYVLIAAVIIFVF
VKYIPVLADQINQLVKFGNTFLTTDSNNDFINYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSL
GKEHLVSFTNQFSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAILTTIALWILGFPQLMTLSIMVFLLGLIPV
AGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNPKLMSAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVV
MFFLDVLGVTNQEEIEQPKDTISHT
>Mature_345_residues
MKELSSFLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVLLLYVLIAAVIIFVF
VKYIPVLADQINQLVKFGNTFLTTDSNNDFINYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSL
GKEHLVSFTNQFSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAILTTIALWILGFPQLMTLSIMVFLLGLIPV
AGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNPKLMSAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVV
MFFLDVLGVTNQEEIEQPKDTISHT

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39153; Mature: 39153

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELSSFLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIY
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQIIVLLLYVLIAAVIIFVFVKYIPVLADQINQLVKFGNTFLTTDSNNDFINYIVSLANQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHH
FDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKEHLVSFTNQFSTSKIGFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHH
YEEVKFFGSKFVATFGKVIEAQFIIALVNAILTTIALWILGFPQLMTLSIMVFLLGLIPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNPKLMSAKTNLPVFYTFII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHH
LIFGEHFFGIWGLIVGIPVVMFFLDVLGVTNQEEIEQPKDTISHT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHCCCC
>Mature Secondary Structure
MKELSSFLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIY
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQIIVLLLYVLIAAVIIFVFVKYIPVLADQINQLVKFGNTFLTTDSNNDFINYIVSLANQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHH
FDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKEHLVSFTNQFSTSKIGFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHH
YEEVKFFGSKFVATFGKVIEAQFIIALVNAILTTIALWILGFPQLMTLSIMVFLLGLIPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNPKLMSAKTNLPVFYTFII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHH
LIFGEHFFGIWGLIVGIPVVMFFLDVLGVTNQEEIEQPKDTISHT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]