Click here to switch to the map view.

The map label for this gene is ymfM [H]

Identifier: 226223996

GI number: 226223996

Start: 1405939

End: 1406868

Strand: Direct

Name: ymfM [H]

Synonym: Lm4b_01404

Alternate gene names: 226223996

Gene position: 1405939-1406868 (Clockwise)

Preceding gene: 226223995

Following gene: 226223997

Centisome position: 48.27

GC content: 36.02

Gene sequence:

>930_bases
TTGACAGAACTCGGTGATAAACTGAAACAAGCTAGACGTGAAAAAGGACTCAGTTTAGACGACTTGCAACAAGTAACGAA
AATTCAAAAACGTTATTTGGTAGCGATTGAAGAAGGAAATTATGCTGTAATGCCTGGCAAATTTTATGCAAGGGCATTTA
TTAAACAATACGCAGAAGCAGTTGGGCTAGATAGCGCAACACTTTTCGACGAGTTTGAAAGCGAAGTTCCGGAAACACCG
CAACAAGAAGTAGTAAATAATGAGCCAACACGGGTACAAAGTAAAAGAAATCCGATGCCTGCACAATCTGTAGGTAATCA
AGCGAATACTCGTAATCGTTTTTTTGATATCTTACCAAAAATCCTTATTGCTTTATTTATTGTGTTTATTCTTTTCATTG
TTTGGTTTTTCTTGCTTAATAAACAAGACAATTCCACGGAAAAAGTGAAAACAGATACAAATAATCCTACAGTAAAAGTA
GAAGATTCGACAAAAAGCAAGGATACAAGTAAAGACACTGAGAAAAAAGATACGACAACAAACAAAGATAAATCTACAGA
AACAAAGGATAAAAAAGAAGATACAACCAAAGAAGTTGAAGTGACTAAAGGAGAGACGTCTGGTAATGCCACTACGTACA
CAGTGAAAAATACGGACAAAATGACTCTGTCACTTAGCGCCACTGGTGATTCTTGGATAGGCGTTTCCGATGCGAATGGT
AGTACAATCCAAAACGAAACACTATCAACCCAAAATCCTTCTGCAGAAATTGATTTAGGTGATAACAAGACGGTTTCTAT
CGTTATCGGAAATTCTCCTGTTACAACTGTAAAAATCAATGGTAAACAGCTAGAACTTGCACCTGATCTTGTTAAACAAG
TATTAACAATTAATTTAGAAGCAAGTGATACTAGCTCAGATGCTGAATAA

Upstream 100 bases:

>100_bases
GCTATATCACTGGAGAAGTTTTGCGCTTAAATGGCGGTTGGCTTATGTAATTTTAGTAAAAAAATGGAAATTTGAAATTA
GTAATGGTAGGTGTTTAATT

Downstream 100 bases:

>100_bases
TTTGTTTTATATGGCGAAATCTACTCATTAGATTTCGCCAACATTTTTTATAATTACATACTTTTCAAATGTAAAAAAGG
AGAGAAAAAGATGAATTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTELGDKLKQARREKGLSLDDLQQVTKIQKRYLVAIEEGNYAVMPGKFYARAFIKQYAEAVGLDSATLFDEFESEVPETP
QQEVVNNEPTRVQSKRNPMPAQSVGNQANTRNRFFDILPKILIALFIVFILFIVWFFLLNKQDNSTEKVKTDTNNPTVKV
EDSTKSKDTSKDTEKKDTTTNKDKSTETKDKKEDTTKEVEVTKGETSGNATTYTVKNTDKMTLSLSATGDSWIGVSDANG
STIQNETLSTQNPSAEIDLGDNKTVSIVIGNSPVTTVKINGKQLELAPDLVKQVLTINLEASDTSSDAE

Sequences:

>Translated_309_residues
MTELGDKLKQARREKGLSLDDLQQVTKIQKRYLVAIEEGNYAVMPGKFYARAFIKQYAEAVGLDSATLFDEFESEVPETP
QQEVVNNEPTRVQSKRNPMPAQSVGNQANTRNRFFDILPKILIALFIVFILFIVWFFLLNKQDNSTEKVKTDTNNPTVKV
EDSTKSKDTSKDTEKKDTTTNKDKSTETKDKKEDTTKEVEVTKGETSGNATTYTVKNTDKMTLSLSATGDSWIGVSDANG
STIQNETLSTQNPSAEIDLGDNKTVSIVIGNSPVTTVKINGKQLELAPDLVKQVLTINLEASDTSSDAE
>Mature_308_residues
TELGDKLKQARREKGLSLDDLQQVTKIQKRYLVAIEEGNYAVMPGKFYARAFIKQYAEAVGLDSATLFDEFESEVPETPQ
QEVVNNEPTRVQSKRNPMPAQSVGNQANTRNRFFDILPKILIALFIVFILFIVWFFLLNKQDNSTEKVKTDTNNPTVKVE
DSTKSKDTSKDTEKKDTTTNKDKSTETKDKKEDTTKEVEVTKGETSGNATTYTVKNTDKMTLSLSATGDSWIGVSDANGS
TIQNETLSTQNPSAEIDLGDNKTVSIVIGNSPVTTVKINGKQLELAPDLVKQVLTINLEASDTSSDAE

Specific function: Unknown

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34219; Mature: 34087

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELGDKLKQARREKGLSLDDLQQVTKIQKRYLVAIEEGNYAVMPGKFYARAFIKQYAEA
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCEEEECCHHHHHHHHHHHHHH
VGLDSATLFDEFESEVPETPQQEVVNNEPTRVQSKRNPMPAQSVGNQANTRNRFFDILPK
HCCCHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHCCCCCCHHHCCCCCHHHHHHHHHHHH
ILIALFIVFILFIVWFFLLNKQDNSTEKVKTDTNNPTVKVEDSTKSKDTSKDTEKKDTTT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC
NKDKSTETKDKKEDTTKEVEVTKGETSGNATTYTVKNTDKMTLSLSATGDSWIGVSDANG
CCCCCCCCCHHHHCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEEECCCCEEEEECCCC
STIQNETLSTQNPSAEIDLGDNKTVSIVIGNSPVTTVKINGKQLELAPDLVKQVLTINLE
CEECCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCEEECCHHHHHHHHEEEEE
ASDTSSDAE
CCCCCCCCC
>Mature Secondary Structure 
TELGDKLKQARREKGLSLDDLQQVTKIQKRYLVAIEEGNYAVMPGKFYARAFIKQYAEA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCEEEECCHHHHHHHHHHHHHH
VGLDSATLFDEFESEVPETPQQEVVNNEPTRVQSKRNPMPAQSVGNQANTRNRFFDILPK
HCCCHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHCCCCCCHHHCCCCCHHHHHHHHHHHH
ILIALFIVFILFIVWFFLLNKQDNSTEKVKTDTNNPTVKVEDSTKSKDTSKDTEKKDTTT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC
NKDKSTETKDKKEDTTKEVEVTKGETSGNATTYTVKNTDKMTLSLSATGDSWIGVSDANG
CCCCCCCCCHHHHCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEEECCCCEEEEECCCC
STIQNETLSTQNPSAEIDLGDNKTVSIVIGNSPVTTVKINGKQLELAPDLVKQVLTINLE
CEECCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCEEECCHHHHHHHHEEEEE
ASDTSSDAE
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]