Click here to switch to the map view.

The map label for this gene is 226223913

Identifier: 226223913

GI number: 226223913

Start: 1322604

End: 1322978

Strand: Reverse

Name: 226223913

Synonym: Lm4b_01320

Alternate gene names: NA

Gene position: 1322978-1322604 (Counterclockwise)

Preceding gene: 226223933

Following gene: 226223912

Centisome position: 45.42

GC content: 29.07

Gene sequence:

>375_bases
ATGGTAAAATGGCACAAAATTTATACATATAGCGAACGAGTAGAACAATGGGATAATCAAACAATTATTGAAATGCCCTC
TGAAAGTGAATATGAAGGTTATTTTTTCTTGCTACCTAAAAAGATGGTGTATTCACTTACACCAGAATATAGTTATTTTT
ATTTTCCAGATACATGGAACTTCTTTTTAAAAAAACACACAGAAAAGAAAGAACTAAGTGTCTCCAATATGATTCTTTGC
TTTAAAAAAGAAAATGACGAGATAATGCAGTTTTTCCACACAAAAAAAGTAAACGATAGCATTGTCAAAGTGCGTACCCA
TATTCCTAAAAAAATAGAAAAAGATGTGATAATTGAAAATGACCTTATTAGATAA

Upstream 100 bases:

>100_bases
CAGTTTTATCCTTAACTTTAATATTATTTGTGATAAAATAAACGCATAAATAGATAAAAGTGAACGAAAACGACAAAACA
CATAGGAGCATTAGATATAA

Downstream 100 bases:

>100_bases
CCAGAAACAAGCATTAATAAAACTCAAAAAATATAAGGTTGGCGCTCTATTTATGAAACCAGGAAGTGGGAAAACACGGG
TAGCTTGCGAGTTAATAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MVKWHKIYTYSERVEQWDNQTIIEMPSESEYEGYFFLLPKKMVYSLTPEYSYFYFPDTWNFFLKKHTEKKELSVSNMILC
FKKENDEIMQFFHTKKVNDSIVKVRTHIPKKIEKDVIIENDLIR

Sequences:

>Translated_124_residues
MVKWHKIYTYSERVEQWDNQTIIEMPSESEYEGYFFLLPKKMVYSLTPEYSYFYFPDTWNFFLKKHTEKKELSVSNMILC
FKKENDEIMQFFHTKKVNDSIVKVRTHIPKKIEKDVIIENDLIR
>Mature_124_residues
MVKWHKIYTYSERVEQWDNQTIIEMPSESEYEGYFFLLPKKMVYSLTPEYSYFYFPDTWNFFLKKHTEKKELSVSNMILC
FKKENDEIMQFFHTKKVNDSIVKVRTHIPKKIEKDVIIENDLIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15249; Mature: 15249

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKWHKIYTYSERVEQWDNQTIIEMPSESEYEGYFFLLPKKMVYSLTPEYSYFYFPDTWN
CCEEEEEEEHHHHHHHCCCCEEEECCCCCCCCCEEEEECHHHEEECCCCCEEEEECCCCE
FFLKKHTEKKELSVSNMILCFKKENDEIMQFFHTKKVNDSIVKVRTHIPKKIEKDVIIEN
EHHHHCCCCHHCCCCCEEEEEECCCHHHHHHHHHCCCCCHHEEHHHHCCCHHCCCEECCC
DLIR
CCCC
>Mature Secondary Structure
MVKWHKIYTYSERVEQWDNQTIIEMPSESEYEGYFFLLPKKMVYSLTPEYSYFYFPDTWN
CCEEEEEEEHHHHHHHCCCCEEEECCCCCCCCCEEEEECHHHEEECCCCCEEEEECCCCE
FFLKKHTEKKELSVSNMILCFKKENDEIMQFFHTKKVNDSIVKVRTHIPKKIEKDVIIEN
EHHHHCCCCHHCCCCCEEEEEECCCHHHHHHHHHCCCCCHHEEHHHHCCCHHCCCEECCC
DLIR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA