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The map label for this gene is 226223912

Identifier: 226223912

GI number: 226223912

Start: 1321421

End: 1322626

Strand: Reverse

Name: 226223912

Synonym: Lm4b_01319

Alternate gene names: NA

Gene position: 1322626-1321421 (Counterclockwise)

Preceding gene: 226223913

Following gene: 226223911

Centisome position: 45.41

GC content: 31.67

Gene sequence:

>1206_bases
TTGAAAATGACCTTATTAGATAACCAGAAACAAGCATTAATAAAACTCAAAAAATATAAGGTTGGCGCTCTATTTATGAA
ACCAGGAAGTGGGAAAACACGGGTAGCTTGCGAGTTAATAAATGATGTAAACCCAGATTATGTTTTATGGATTACCCCTT
TTCAAACTAAAGAAAATCTCGAAATTGAAATAAGCAAATGGGGTTATTCATTCCCTCAAGAAATTATCGGCATTGAGTCT
CTCTCCAACTCAGATAGATTATACCTGTATTGCCGAAACAAACTCAAAAATTCCACCAATAGTTACATTATTATGGATGA
AAGCCTAAAGATAAAAAATATCCATGCACTTCGAACACAACGAGCGATTAAACTTTCTCGTCTGGCTACCTATAAATTAA
TTATGAACGGCACACCTCTTAGTCGTAATATTTTGGATTTATGGTCACAGCTAGAATTTCTATCTCCTAAAATATTAAAT
CTAAGTTTTTCCCAGTTCAAAAAAACTTTTTGCGAATACGTCACCATTACACAACTAACACAAAGTACGCAACAATCAAT
GGATATCATTAAAAAATATCATAATTTAGAGTACTTATATAAATTAATCACCCCTTTTATATTTACTTCTTCGCACGAAT
TAGCCGTCAAATGGCATTATATTCGTCATGATTTTTCCATTGATGAGGAACTTTTAAAGCAATATTATGAAATAAAAGAA
GACTATCTCCAAAAAGCTGCCGCATATACAATCAACATTAATTTTTTAGAAATGTCTCAAGTAATGCAACATTGTTACTG
TCTTTCTTCTGAAAAATTTACTATTACAGAATCATTAATTGCCGGAAAAGAAGAAACAACGATTATTTTTTGCAAATACA
GACGTTCAGAAGAGGCATTGCAGCAAGCATTTCCAAATGTAAAAATTACTACTTTTGCCAAATCTTCTTACGGACTCAAT
TTGCAATTTTATAATCAAATTATTTATTTTGATAAAACGTTTGATTATTCTCAGCGTGATCAATCAGAAAGGCGGATTTA
CAGAACTGGGCAAACACAAGACTGCTACTATCATGATTTAAGCGGTAATGTCGGTCTGGATTCTCTTATTGATACAAATA
TTTCTAAGAAAACAAGCTTATTGCAAGAATTTAAAAAAGAACTCTCACAAAAAAATTCTTTTGAGGTGATAATGGATGCT
TTCTAG

Upstream 100 bases:

>100_bases
AATGACGAGATAATGCAGTTTTTCCACACAAAAAAAGTAAACGATAGCATTGTCAAAGTGCGTACCCATATTCCTAAAAA
AATAGAAAAAGATGTGATAA

Downstream 100 bases:

>100_bases
AACAGTCTTTGATGCTTCCCAAGAAAGAATGGAAGCGATTTTTTCTGAATTCGATAATATTATTGTGTCGTTTTCGGGTG
GTAAAGATAGCGCAGTAATG

Product: hypothetical protein

Products: NA

Alternate protein names: SNF2 Family Protein; SNF2 Family Domain-Containing Protein

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MKMTLLDNQKQALIKLKKYKVGALFMKPGSGKTRVACELINDVNPDYVLWITPFQTKENLEIEISKWGYSFPQEIIGIES
LSNSDRLYLYCRNKLKNSTNSYIIMDESLKIKNIHALRTQRAIKLSRLATYKLIMNGTPLSRNILDLWSQLEFLSPKILN
LSFSQFKKTFCEYVTITQLTQSTQQSMDIIKKYHNLEYLYKLITPFIFTSSHELAVKWHYIRHDFSIDEELLKQYYEIKE
DYLQKAAAYTININFLEMSQVMQHCYCLSSEKFTITESLIAGKEETTIIFCKYRRSEEALQQAFPNVKITTFAKSSYGLN
LQFYNQIIYFDKTFDYSQRDQSERRIYRTGQTQDCYYHDLSGNVGLDSLIDTNISKKTSLLQEFKKELSQKNSFEVIMDA
F

Sequences:

>Translated_401_residues
MKMTLLDNQKQALIKLKKYKVGALFMKPGSGKTRVACELINDVNPDYVLWITPFQTKENLEIEISKWGYSFPQEIIGIES
LSNSDRLYLYCRNKLKNSTNSYIIMDESLKIKNIHALRTQRAIKLSRLATYKLIMNGTPLSRNILDLWSQLEFLSPKILN
LSFSQFKKTFCEYVTITQLTQSTQQSMDIIKKYHNLEYLYKLITPFIFTSSHELAVKWHYIRHDFSIDEELLKQYYEIKE
DYLQKAAAYTININFLEMSQVMQHCYCLSSEKFTITESLIAGKEETTIIFCKYRRSEEALQQAFPNVKITTFAKSSYGLN
LQFYNQIIYFDKTFDYSQRDQSERRIYRTGQTQDCYYHDLSGNVGLDSLIDTNISKKTSLLQEFKKELSQKNSFEVIMDA
F
>Mature_401_residues
MKMTLLDNQKQALIKLKKYKVGALFMKPGSGKTRVACELINDVNPDYVLWITPFQTKENLEIEISKWGYSFPQEIIGIES
LSNSDRLYLYCRNKLKNSTNSYIIMDESLKIKNIHALRTQRAIKLSRLATYKLIMNGTPLSRNILDLWSQLEFLSPKILN
LSFSQFKKTFCEYVTITQLTQSTQQSMDIIKKYHNLEYLYKLITPFIFTSSHELAVKWHYIRHDFSIDEELLKQYYEIKE
DYLQKAAAYTININFLEMSQVMQHCYCLSSEKFTITESLIAGKEETTIIFCKYRRSEEALQQAFPNVKITTFAKSSYGLN
LQFYNQIIYFDKTFDYSQRDQSERRIYRTGQTQDCYYHDLSGNVGLDSLIDTNISKKTSLLQEFKKELSQKNSFEVIMDA
F

Specific function: Unknown

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47159; Mature: 47159

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMTLLDNQKQALIKLKKYKVGALFMKPGSGKTRVACELINDVNPDYVLWITPFQTKENL
CEEEEECCCHHHHHHHHEEEEEEEEECCCCCCCHHHEEEHHCCCCCEEEEEECCCCCCCC
EIEISKWGYSFPQEIIGIESLSNSDRLYLYCRNKLKNSTNSYIIMDESLKIKNIHALRTQ
EEEEECCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEECCEEEEHHHHHHHH
RAIKLSRLATYKLIMNGTPLSRNILDLWSQLEFLSPKILNLSFSQFKKTFCEYVTITQLT
HHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHH
QSTQQSMDIIKKYHNLEYLYKLITPFIFTSSHELAVKWHYIRHDFSIDEELLKQYYEIKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHH
DYLQKAAAYTININFLEMSQVMQHCYCLSSEKFTITESLIAGKEETTIIFCKYRRSEEAL
HHHHHHEEEEEEEEHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCEEEEEEECCCHHHH
QQAFPNVKITTFAKSSYGLNLQFYNQIIYFDKTFDYSQRDQSERRIYRTGQTQDCYYHDL
HHHCCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHEECCCCCCCEEEEC
SGNVGLDSLIDTNISKKTSLLQEFKKELSQKNSFEVIMDAF
CCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECC
>Mature Secondary Structure
MKMTLLDNQKQALIKLKKYKVGALFMKPGSGKTRVACELINDVNPDYVLWITPFQTKENL
CEEEEECCCHHHHHHHHEEEEEEEEECCCCCCCHHHEEEHHCCCCCEEEEEECCCCCCCC
EIEISKWGYSFPQEIIGIESLSNSDRLYLYCRNKLKNSTNSYIIMDESLKIKNIHALRTQ
EEEEECCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEECCEEEEHHHHHHHH
RAIKLSRLATYKLIMNGTPLSRNILDLWSQLEFLSPKILNLSFSQFKKTFCEYVTITQLT
HHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHH
QSTQQSMDIIKKYHNLEYLYKLITPFIFTSSHELAVKWHYIRHDFSIDEELLKQYYEIKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHH
DYLQKAAAYTININFLEMSQVMQHCYCLSSEKFTITESLIAGKEETTIIFCKYRRSEEAL
HHHHHHEEEEEEEEHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCEEEEEEECCCHHHH
QQAFPNVKITTFAKSSYGLNLQFYNQIIYFDKTFDYSQRDQSERRIYRTGQTQDCYYHDL
HHHCCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHEECCCCCCCEEEEC
SGNVGLDSLIDTNISKKTSLLQEFKKELSQKNSFEVIMDAF
CCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA