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The map label for this gene is rsgA1 [H]

Identifier: 226223933

GI number: 226223933

Start: 1345250

End: 1346290

Strand: Reverse

Name: rsgA1 [H]

Synonym: Lm4b_01340

Alternate gene names: 226223933

Gene position: 1346290-1345250 (Counterclockwise)

Preceding gene: 226223934

Following gene: 226223913

Centisome position: 46.22

GC content: 39.29

Gene sequence:

>1041_bases
TTGACATTAGAACAATACGGTTTTACAAATTTTTTTAAAGAACAAAAGATAGCTGCTACCTCCTCTTATGGTAGAGTTAC
GGCGGTATTTAGAGATTATTATCGCGTTATTACGGAGAATGAAGAATTTTTAGCATCATTGAAACGTGGAAATTTTTATG
AACTATCCTCTACTTCCCTTCCCGCTGTTGGTGATTTTGTAGAGGTCAGTAGCGATGCGCAAATACTCTCTGTACTAGAG
CGTAAAACGGTCTTTTCTCGGATGAATAAAGACTCAGAGGAACAATTGATTGCAGCGAATTTTGATTATGCTCTCATTGT
GATGAGTTTGAATCATGACTTTAATTTGAATCGATTAGAGCGTTATTTGACGGTTGCTTGGGATAGTGGTGCAACACCGA
TTATCATTTTAACAAAAGCAGATTTAGTGGAGGATTTAACAGCCTTTGCTCAGCAGCTCGAGACAGTTGCTTATGGCGTT
CCAGCATACTATGTGGATAATTTATCACATCATGGTTTTGAAGCTTTAGAACGCGATTTAAAGCCGAATAGTACGCTTGT
TTTGCTTGGCTCTTCCGGTGTCGGAAAATCTTCTTTTATTAATTCGCTTGCAGGTACTGATTTAATGAAAACTTCTGGTA
TCCGCGAAGATGATAGTAAAGGAAAACATACGACGACACATAGGGAAATGCATTTGCTTACGAATGGGTGGATTGTGATT
GATACACCTGGAATGCGTGAATTCGGTGTTGGTTTTAACCAAGCTGGATTAGAAACCACTTTCTCGGATGTAGAGGAATT
GGCTGAAGGATGTCGTTTTCACGATTGCTCTCATACACAAGAACCAGGTTGCGCTGTAAAAGCAGCATTAGAAGATGGCA
CTTTAACTATGCAACACTACGAAAATTGGTTGAAATTGCAGCGAGAAATGGCTTATCACGCTCGAAAAAATAGCCCTGCT
CTCGCAAGACAAGAACGTGACCGCTGGAAAGTTATTCAAAAATCACTTCGGACACATTTAAAAACACGTCCAAAAAAATA
G

Upstream 100 bases:

>100_bases
AGGATGATGAATTATGGCAATTGTAAAAATGGAAAACCTCATAATTAATACGGGGGTATTTTACCTATAGAATGCTCCCA
ACTACAAAGGAGCGAAAACA

Downstream 100 bases:

>100_bases
TAAAAAAAGCAAGTAGCTCAGGCTACTTGCTTTTTGTATTATTTAGATTCTGGTTTTTTCGTTTTAGGATAGAATTTTTT
CTCTGCTTGTGGTTTTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MTLEQYGFTNFFKEQKIAATSSYGRVTAVFRDYYRVITENEEFLASLKRGNFYELSSTSLPAVGDFVEVSSDAQILSVLE
RKTVFSRMNKDSEEQLIAANFDYALIVMSLNHDFNLNRLERYLTVAWDSGATPIIILTKADLVEDLTAFAQQLETVAYGV
PAYYVDNLSHHGFEALERDLKPNSTLVLLGSSGVGKSSFINSLAGTDLMKTSGIREDDSKGKHTTTHREMHLLTNGWIVI
DTPGMREFGVGFNQAGLETTFSDVEELAEGCRFHDCSHTQEPGCAVKAALEDGTLTMQHYENWLKLQREMAYHARKNSPA
LARQERDRWKVIQKSLRTHLKTRPKK

Sequences:

>Translated_346_residues
MTLEQYGFTNFFKEQKIAATSSYGRVTAVFRDYYRVITENEEFLASLKRGNFYELSSTSLPAVGDFVEVSSDAQILSVLE
RKTVFSRMNKDSEEQLIAANFDYALIVMSLNHDFNLNRLERYLTVAWDSGATPIIILTKADLVEDLTAFAQQLETVAYGV
PAYYVDNLSHHGFEALERDLKPNSTLVLLGSSGVGKSSFINSLAGTDLMKTSGIREDDSKGKHTTTHREMHLLTNGWIVI
DTPGMREFGVGFNQAGLETTFSDVEELAEGCRFHDCSHTQEPGCAVKAALEDGTLTMQHYENWLKLQREMAYHARKNSPA
LARQERDRWKVIQKSLRTHLKTRPKK
>Mature_345_residues
TLEQYGFTNFFKEQKIAATSSYGRVTAVFRDYYRVITENEEFLASLKRGNFYELSSTSLPAVGDFVEVSSDAQILSVLER
KTVFSRMNKDSEEQLIAANFDYALIVMSLNHDFNLNRLERYLTVAWDSGATPIIILTKADLVEDLTAFAQQLETVAYGVP
AYYVDNLSHHGFEALERDLKPNSTLVLLGSSGVGKSSFINSLAGTDLMKTSGIREDDSKGKHTTTHREMHLLTNGWIVID
TPGMREFGVGFNQAGLETTFSDVEELAEGCRFHDCSHTQEPGCAVKAALEDGTLTMQHYENWLKLQREMAYHARKNSPAL
ARQERDRWKVIQKSLRTHLKTRPKK

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=248, Percent_Identity=33.0645161290323, Blast_Score=124, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000038
- InterPro:   IPR010914
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 39086; Mature: 38955

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLEQYGFTNFFKEQKIAATSSYGRVTAVFRDYYRVITENEEFLASLKRGNFYELSSTSL
CCCCHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCC
PAVGDFVEVSSDAQILSVLERKTVFSRMNKDSEEQLIAANFDYALIVMSLNHDFNLNRLE
CCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEEECCCCCHHHHH
RYLTVAWDSGATPIIILTKADLVEDLTAFAQQLETVAYGVPAYYVDNLSHHGFEALERDL
HEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHCC
KPNSTLVLLGSSGVGKSSFINSLAGTDLMKTSGIREDDSKGKHTTTHREMHLLTNGWIVI
CCCCEEEEEECCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHHEEEEECCEEEE
DTPGMREFGVGFNQAGLETTFSDVEELAEGCRFHDCSHTQEPGCAVKAALEDGTLTMQHY
ECCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEHHHH
ENWLKLQREMAYHARKNSPALARQERDRWKVIQKSLRTHLKTRPKK
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TLEQYGFTNFFKEQKIAATSSYGRVTAVFRDYYRVITENEEFLASLKRGNFYELSSTSL
CCCHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCC
PAVGDFVEVSSDAQILSVLERKTVFSRMNKDSEEQLIAANFDYALIVMSLNHDFNLNRLE
CCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEEECCCCCHHHHH
RYLTVAWDSGATPIIILTKADLVEDLTAFAQQLETVAYGVPAYYVDNLSHHGFEALERDL
HEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHCC
KPNSTLVLLGSSGVGKSSFINSLAGTDLMKTSGIREDDSKGKHTTTHREMHLLTNGWIVI
CCCCEEEEEECCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHHEEEEECCEEEE
DTPGMREFGVGFNQAGLETTFSDVEELAEGCRFHDCSHTQEPGCAVKAALEDGTLTMQHY
ECCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEHHHH
ENWLKLQREMAYHARKNSPALARQERDRWKVIQKSLRTHLKTRPKK
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]