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The map label for this gene is ydiF [H]

Identifier: 225853478

GI number: 225853478

Start: 1989684

End: 1991174

Strand: Reverse

Name: ydiF [H]

Synonym: BMEA_A2108

Alternate gene names: 225853478

Gene position: 1991174-1989684 (Counterclockwise)

Preceding gene: 225853479

Following gene: 225853477

Centisome position: 93.67

GC content: 58.42

Gene sequence:

>1491_bases
ATGAGCAAGCATATTTCATTTGCTGAAGCCGCTGCACTTATCCCCGACAATGCGGTTGTTTCGGTTTCCTCGTCCAGTGG
CCTCGGTTGCCCGGATATGATGCTGAAAGCCATTGGCGAGCGGTTTGATGAAACCGGCCATCCTCAAAATATCACCACGC
TGCACCCCATTGCTGCGGGTGATATGAGCGGCATCAGGGGCGTCGATTACATTGCCAAAAAGGGGCTTTTGAAAAAGATC
CTTGCCGGTTCTTATCCATCCGGGCCATCCAGTGCCGAACCGCCGCTGATCTGGCAGATGATTACCAATAACGAGATTCC
AGCCTATAATATTCCGTCAGGCATATTGTTCGACATGCACCGCGAGGCGGCGGCCAGGCGGCCCGGCGTGCTGACCAAGG
TGGGGCTTGATACATTTGTCGATCCCAAGCGCCAGGGTACGGCGATGAATGACAAGGCGCGTGAGGCACCTGTCGTCAAA
CGCGTCAGTTTTGAGGGTGAAGACTGGCTCTATTTTCCGGCGATTGCACCGCAGGTGGCCATCATCCGCGCCACCACGGC
GGATGAACGCGGCAACCTCACCTATGAGCATGAGGGGGCCACTCTCGGCGGGCTGGATCAGGCGCTGGCTGCGCGCAACA
ATGGCGGCATCGTCATTGCGCAGGTGAAACGCATCGCCAGGGAAGGCACGCTGAAACCGCATGATGTGCGTGTGCCGGGC
GTTCTGGTTGATTATATCGTGGTCGATCCAGACCAGAAGCAGACGACGCAGACGCTTTACGACCCGGCAATTTCCGGCGA
GATTTTCCGCCCGCTCGATACGTTCCGTCTGCCCGAATTCAATATTCAAAAGGCGATTGCGCGCCGTGTCGCGCAGGAAT
TGCAGGCGGGCAGTGCGGTCAATCTGGGTTTTGGCATTTCCGCCAATGTACCGCGCATTCTGCTGGAAGAGGGCCTGCAT
GGTGCGGTGACATGGGTAATCGAGCAGGGGGCGGTCGGCGGTGTGCCGCTTCTGGATTTTGCCTTTGGCTGTGCGTCCAA
TGCCGACGCCTATATGCCGTCGCCCTATCAGTTCACCTATTTTCAGGGGGCGGGCTTCGATGCCTCGCTCTTGTCCTTCC
TTGAGATCGGGCGCGACGGCTCGGTCAATGTGTCGAAGCTCTCCTTCCGTCCGCATGTGACGGCGGGCGCTGGCGGCTTT
GTCGATATTACCGCGCGTGCCAAGAAGATCGTCTTTTCCGGCCCGCGTGGCGTCGAGCAGGGGCAGGATGTCACCTATGT
CACCGAGCGCGCCGTGATGAAGCTGACGCCGCAAGGCATTGTGCTGACCGAAATCGCGCCGGGTGTGGATTTGCAGGCGC
ATATTCTGGATCAGGCTGAGTTTCCGCTGATTGTCTCGGATCAATTGAAGCTCATGGATGAGGCGCTGTTCCGCGAAGAG
CCGATCGGGCTTACGCTGCCGCAAAAGCCTGCGCGAAAGCTGGAGGCGTGA

Upstream 100 bases:

>100_bases
CATTGGAGGATGGCATCTGGTCGCTCGCCACCGGGCTGGCCGTGCTTGAGGCCGCAAAAACCGGCAAAGCCACCGCCGTT
CATTCAGGACTTTAAGACTT

Downstream 100 bases:

>100_bases
CATGGCTGACAGAATAGAAATTTCGATCGAAAACCTCATCGCGGTCATGACAATCAGGCGGCCGGAAAAGCTCAATGCGC
TCGATATACCGCTCTTGCAG

Product: coenzyme A transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MSKHISFAEAAALIPDNAVVSVSSSSGLGCPDMMLKAIGERFDETGHPQNITTLHPIAAGDMSGIRGVDYIAKKGLLKKI
LAGSYPSGPSSAEPPLIWQMITNNEIPAYNIPSGILFDMHREAAARRPGVLTKVGLDTFVDPKRQGTAMNDKAREAPVVK
RVSFEGEDWLYFPAIAPQVAIIRATTADERGNLTYEHEGATLGGLDQALAARNNGGIVIAQVKRIAREGTLKPHDVRVPG
VLVDYIVVDPDQKQTTQTLYDPAISGEIFRPLDTFRLPEFNIQKAIARRVAQELQAGSAVNLGFGISANVPRILLEEGLH
GAVTWVIEQGAVGGVPLLDFAFGCASNADAYMPSPYQFTYFQGAGFDASLLSFLEIGRDGSVNVSKLSFRPHVTAGAGGF
VDITARAKKIVFSGPRGVEQGQDVTYVTERAVMKLTPQGIVLTEIAPGVDLQAHILDQAEFPLIVSDQLKLMDEALFREE
PIGLTLPQKPARKLEA

Sequences:

>Translated_496_residues
MSKHISFAEAAALIPDNAVVSVSSSSGLGCPDMMLKAIGERFDETGHPQNITTLHPIAAGDMSGIRGVDYIAKKGLLKKI
LAGSYPSGPSSAEPPLIWQMITNNEIPAYNIPSGILFDMHREAAARRPGVLTKVGLDTFVDPKRQGTAMNDKAREAPVVK
RVSFEGEDWLYFPAIAPQVAIIRATTADERGNLTYEHEGATLGGLDQALAARNNGGIVIAQVKRIAREGTLKPHDVRVPG
VLVDYIVVDPDQKQTTQTLYDPAISGEIFRPLDTFRLPEFNIQKAIARRVAQELQAGSAVNLGFGISANVPRILLEEGLH
GAVTWVIEQGAVGGVPLLDFAFGCASNADAYMPSPYQFTYFQGAGFDASLLSFLEIGRDGSVNVSKLSFRPHVTAGAGGF
VDITARAKKIVFSGPRGVEQGQDVTYVTERAVMKLTPQGIVLTEIAPGVDLQAHILDQAEFPLIVSDQLKLMDEALFREE
PIGLTLPQKPARKLEA
>Mature_495_residues
SKHISFAEAAALIPDNAVVSVSSSSGLGCPDMMLKAIGERFDETGHPQNITTLHPIAAGDMSGIRGVDYIAKKGLLKKIL
AGSYPSGPSSAEPPLIWQMITNNEIPAYNIPSGILFDMHREAAARRPGVLTKVGLDTFVDPKRQGTAMNDKAREAPVVKR
VSFEGEDWLYFPAIAPQVAIIRATTADERGNLTYEHEGATLGGLDQALAARNNGGIVIAQVKRIAREGTLKPHDVRVPGV
LVDYIVVDPDQKQTTQTLYDPAISGEIFRPLDTFRLPEFNIQKAIARRVAQELQAGSAVNLGFGISANVPRILLEEGLHG
AVTWVIEQGAVGGVPLLDFAFGCASNADAYMPSPYQFTYFQGAGFDASLLSFLEIGRDGSVNVSKLSFRPHVTAGAGGFV
DITARAKKIVFSGPRGVEQGQDVTYVTERAVMKLTPQGIVLTEIAPGVDLQAHILDQAEFPLIVSDQLKLMDEALFREEP
IGLTLPQKPARKLEA

Specific function: Unknown

COG id: COG4670

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae AtoD [H]

Homologues:

Organism=Escherichia coli, GI1787985, Length=529, Percent_Identity=36.8620037807183, Blast_Score=322, Evalue=4e-89,
Organism=Escherichia coli, GI1788551, Length=252, Percent_Identity=23.8095238095238, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014388
- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: NA

Molecular weight: Translated: 53346; Mature: 53214

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKHISFAEAAALIPDNAVVSVSSSSGLGCPDMMLKAIGERFDETGHPQNITTLHPIAAG
CCCCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCC
DMSGIRGVDYIAKKGLLKKILAGSYPSGPSSAEPPLIWQMITNNEIPAYNIPSGILFDMH
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEHHH
REAAARRPGVLTKVGLDTFVDPKRQGTAMNDKAREAPVVKRVSFEGEDWLYFPAIAPQVA
HHHHHCCCCCEEEECCHHHCCCCCCCCCCCCHHHCCCCEEEEECCCCCEEEECCCCCCEE
IIRATTADERGNLTYEHEGATLGGLDQALAARNNGGIVIAQVKRIAREGTLKPHDVRVPG
EEEEECCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCEECCC
VLVDYIVVDPDQKQTTQTLYDPAISGEIFRPLDTFRLPEFNIQKAIARRVAQELQAGSAV
EEEEEEEECCCCHHHHHHHHCCCCCCCHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEE
NLGFGISANVPRILLEEGLHGAVTWVIEQGAVGGVPLLDFAFGCASNADAYMPSPYQFTY
EECCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEE
FQGAGFDASLLSFLEIGRDGSVNVSKLSFRPHVTAGAGGFVDITARAKKIVFSGPRGVEQ
EECCCCCHHHHHHHHHCCCCCCEEEEEEECCCEECCCCCEEEEEECCEEEEECCCCCCCC
GQDVTYVTERAVMKLTPQGIVLTEIAPGVDLQAHILDQAEFPLIVSDQLKLMDEALFREE
CCCEEEEHHHHHEEECCCCEEEEECCCCCCCCCEECCCCCCCEEECHHHHHHHHHHHHCC
PIGLTLPQKPARKLEA
CCCCCCCCCHHHHCCC
>Mature Secondary Structure 
SKHISFAEAAALIPDNAVVSVSSSSGLGCPDMMLKAIGERFDETGHPQNITTLHPIAAG
CCCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCC
DMSGIRGVDYIAKKGLLKKILAGSYPSGPSSAEPPLIWQMITNNEIPAYNIPSGILFDMH
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEHHH
REAAARRPGVLTKVGLDTFVDPKRQGTAMNDKAREAPVVKRVSFEGEDWLYFPAIAPQVA
HHHHHCCCCCEEEECCHHHCCCCCCCCCCCCHHHCCCCEEEEECCCCCEEEECCCCCCEE
IIRATTADERGNLTYEHEGATLGGLDQALAARNNGGIVIAQVKRIAREGTLKPHDVRVPG
EEEEECCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCEECCC
VLVDYIVVDPDQKQTTQTLYDPAISGEIFRPLDTFRLPEFNIQKAIARRVAQELQAGSAV
EEEEEEEECCCCHHHHHHHHCCCCCCCHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEE
NLGFGISANVPRILLEEGLHGAVTWVIEQGAVGGVPLLDFAFGCASNADAYMPSPYQFTY
EECCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEE
FQGAGFDASLLSFLEIGRDGSVNVSKLSFRPHVTAGAGGFVDITARAKKIVFSGPRGVEQ
EECCCCCHHHHHHHHHCCCCCCEEEEEEECCCEECCCCCEEEEEECCEEEEECCCCCCCC
GQDVTYVTERAVMKLTPQGIVLTEIAPGVDLQAHILDQAEFPLIVSDQLKLMDEALFREE
CCCEEEEHHHHHEEECCCCEEEEECCCCCCCCCEECCCCCCCEEECHHHHHHHHHHHHCC
PIGLTLPQKPARKLEA
CCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 3541912; 7984428 [H]