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The map label for this gene is rlpA [H]

Identifier: 225852495

GI number: 225852495

Start: 972540

End: 973805

Strand: Direct

Name: rlpA [H]

Synonym: BMEA_A1030

Alternate gene names: 225852495

Gene position: 972540-973805 (Clockwise)

Preceding gene: 225852494

Following gene: 225852496

Centisome position: 45.75

GC content: 57.98

Gene sequence:

>1266_bases
ATGAATTTGAAGCGTGGGCTGAAAGCATCGGTCAATGGCATCGTGCTGCGTAAAAAGCGCGGCTCGGCGGCAATGCTGGC
GCTCATGGCTGTGGCCGTCACGCTTGCGGGCTGTGCATCGACGCCCCAGACAAAATCCAAGCATAAACGATCGAAGGGAT
ATTTCGCCGAGTCCAAATATGGCGTGAAGGCAAGTCCGCGTGTCGTTTATGGCAAGGGCCAGCCGATGCCGCGCGGCGGT
GGCCGCGACCAGACCGGCAAACCCTACCAGGTCAAGGGGCGCTGGTATTACCCCAAGGAAGACAAGAACTATACGGCGGT
TGGCCGTGCTTCCTGGTATGGTGAGGCCTTCCATGGGCGCCTCACAGCCAATGGTGAAGTTTATGACATGACGCATCTTA
CGGCTGCGCATCCCACCATGCCGCTGCCAAGCTATGCGCGCGTTACCAATCTGGATACGGGAAGCTCTGTCATTGTCCGC
GTGAACGACCGCGGCCCTTACGAATATGACCGCGTGATCGACCTTTCGTGGAAAGCGGCTGAGATGTTGGATTACCAGCA
TCATGGTACGGCGAATGTGAAGGTTGAATATGTGGGCCGCGCGCCGCTTGAGGGCAATGACGATGCCTTCCTGCTGGCGT
CCTATCGTCCAGGGGGCGGAGATACGATCGGCCAGCCTGCAACGGGCGTGATGCTTGCCATGAACGGACCGACACCGACC
TCGCCGAAATCGCATATTCCGGTGCCGAACATGGAACCTGTGCGGGTATCGGCACCAATTCCGCAGGAATCGCCATTCTC
GATCAATCCGGCCTATGGAGATCCGTCCGGTCAGGCGCCGGTCATGCCTGCCCATGTGCCCGTGCCGACCATAAGGCCGG
GATCAAGCTTTGGCGTTGCGAATGCGGCGCATATCGGTGGCCTTGCAGGCTATGCTTCGGATCGTCTGGCAACGGCTGCC
TACCGGGAAGAAAAAACCTATGGCAGCATCCTGACTGCTTCTGCGGTTTCCAATGCATGGAAGCGTAGAAATGCAGAAGA
CGAAGGCGAATATATCGAACTTGGCCTCTTTCCCTCGCTGGCTGCCGCCAAAAAGCTGGAAAGCGCCTTGCCGCGTTCGG
CCAGGGTGACACGTGAGAAAATTCCGACCGAAAATGGCGAATTTTATGAATTGACGGCTGTTGCTGAAAAGGGCGGCAAT
GATGCGCTTCTGCGTGCGGCATGGAAAGCTGGCGCAACAGATGCCTTCGTGGTCCGCAGGGGCTGA

Upstream 100 bases:

>100_bases
GAAAGTTTTAATGATCCGTCAATAAATCGGTGACATCACTGTTTTCTATAAAGGCAACCAGCGTTTTCGGTTGCGCTTCT
GTGTATCGGGTATGTGGCGT

Downstream 100 bases:

>100_bases
CGGTCCACTCACATGGCGGTGAGGGCGAATTGATTTTCGCTGAAACCGTTGCGTAAACTATATGCAGGCGTTCTGTTTCG
CGACGTTCAGGTTCAGGCAA

Product: rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MNLKRGLKASVNGIVLRKKRGSAAMLALMAVAVTLAGCASTPQTKSKHKRSKGYFAESKYGVKASPRVVYGKGQPMPRGG
GRDQTGKPYQVKGRWYYPKEDKNYTAVGRASWYGEAFHGRLTANGEVYDMTHLTAAHPTMPLPSYARVTNLDTGSSVIVR
VNDRGPYEYDRVIDLSWKAAEMLDYQHHGTANVKVEYVGRAPLEGNDDAFLLASYRPGGGDTIGQPATGVMLAMNGPTPT
SPKSHIPVPNMEPVRVSAPIPQESPFSINPAYGDPSGQAPVMPAHVPVPTIRPGSSFGVANAAHIGGLAGYASDRLATAA
YREEKTYGSILTASAVSNAWKRRNAEDEGEYIELGLFPSLAAAKKLESALPRSARVTREKIPTENGEFYELTAVAEKGGN
DALLRAAWKAGATDAFVVRRG

Sequences:

>Translated_421_residues
MNLKRGLKASVNGIVLRKKRGSAAMLALMAVAVTLAGCASTPQTKSKHKRSKGYFAESKYGVKASPRVVYGKGQPMPRGG
GRDQTGKPYQVKGRWYYPKEDKNYTAVGRASWYGEAFHGRLTANGEVYDMTHLTAAHPTMPLPSYARVTNLDTGSSVIVR
VNDRGPYEYDRVIDLSWKAAEMLDYQHHGTANVKVEYVGRAPLEGNDDAFLLASYRPGGGDTIGQPATGVMLAMNGPTPT
SPKSHIPVPNMEPVRVSAPIPQESPFSINPAYGDPSGQAPVMPAHVPVPTIRPGSSFGVANAAHIGGLAGYASDRLATAA
YREEKTYGSILTASAVSNAWKRRNAEDEGEYIELGLFPSLAAAKKLESALPRSARVTREKIPTENGEFYELTAVAEKGGN
DALLRAAWKAGATDAFVVRRG
>Mature_421_residues
MNLKRGLKASVNGIVLRKKRGSAAMLALMAVAVTLAGCASTPQTKSKHKRSKGYFAESKYGVKASPRVVYGKGQPMPRGG
GRDQTGKPYQVKGRWYYPKEDKNYTAVGRASWYGEAFHGRLTANGEVYDMTHLTAAHPTMPLPSYARVTNLDTGSSVIVR
VNDRGPYEYDRVIDLSWKAAEMLDYQHHGTANVKVEYVGRAPLEGNDDAFLLASYRPGGGDTIGQPATGVMLAMNGPTPT
SPKSHIPVPNMEPVRVSAPIPQESPFSINPAYGDPSGQAPVMPAHVPVPTIRPGSSFGVANAAHIGGLAGYASDRLATAA
YREEKTYGSILTASAVSNAWKRRNAEDEGEYIELGLFPSLAAAKKLESALPRSARVTREKIPTENGEFYELTAVAEKGGN
DALLRAAWKAGATDAFVVRRG

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=101, Percent_Identity=48.5148514851485, Blast_Score=101, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009009
- InterPro:   IPR012997
- InterPro:   IPR007730 [H]

Pfam domain/function: PF03330 DPBB_1; PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 45195; Mature: 45195

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKRGLKASVNGIVLRKKRGSAAMLALMAVAVTLAGCASTPQTKSKHKRSKGYFAESKY
CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCC
GVKASPRVVYGKGQPMPRGGGRDQTGKPYQVKGRWYYPKEDKNYTAVGRASWYGEAFHGR
CCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCHHHCCE
LTANGEVYDMTHLTAAHPTMPLPSYARVTNLDTGSSVIVRVNDRGPYEYDRVIDLSWKAA
EECCCEEEEEEEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCEEEECCCHHH
EMLDYQHHGTANVKVEYVGRAPLEGNDDAFLLASYRPGGGDTIGQPATGVMLAMNGPTPT
HHHHHCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCC
SPKSHIPVPNMEPVRVSAPIPQESPFSINPAYGDPSGQAPVMPAHVPVPTIRPGSSFGVA
CCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NAAHIGGLAGYASDRLATAAYREEKTYGSILTASAVSNAWKRRNAEDEGEYIELGLFPSL
CHHHHCCHHHCCCCHHHHHHHHHHHHHCCEEEHHHHHHHHHHCCCCCCCCEEEEECCCCH
AAAKKLESALPRSARVTREKIPTENGEFYELTAVAEKGGNDALLRAAWKAGATDAFVVRR
HHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEC
G
C
>Mature Secondary Structure
MNLKRGLKASVNGIVLRKKRGSAAMLALMAVAVTLAGCASTPQTKSKHKRSKGYFAESKY
CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCC
GVKASPRVVYGKGQPMPRGGGRDQTGKPYQVKGRWYYPKEDKNYTAVGRASWYGEAFHGR
CCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCHHHCCE
LTANGEVYDMTHLTAAHPTMPLPSYARVTNLDTGSSVIVRVNDRGPYEYDRVIDLSWKAA
EECCCEEEEEEEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCEEEECCCHHH
EMLDYQHHGTANVKVEYVGRAPLEGNDDAFLLASYRPGGGDTIGQPATGVMLAMNGPTPT
HHHHHCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCC
SPKSHIPVPNMEPVRVSAPIPQESPFSINPAYGDPSGQAPVMPAHVPVPTIRPGSSFGVA
CCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NAAHIGGLAGYASDRLATAAYREEKTYGSILTASAVSNAWKRRNAEDEGEYIELGLFPSL
CHHHHCCHHHCCCCHHHHHHHHHHHHHCCEEEHHHHHHHHHHCCCCCCCCEEEEECCCCH
AAAKKLESALPRSARVTREKIPTENGEFYELTAVAEKGGNDALLRAAWKAGATDAFVVRR
HHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]