| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630851
Identifier: 225630851
GI number: 225630851
Start: 1247573
End: 1248370
Strand: Direct
Name: 225630851
Synonym: WRi_011570
Alternate gene names: NA
Gene position: 1247573-1248370 (Clockwise)
Preceding gene: 225630847
Following gene: 225630852
Centisome position: 86.29
GC content: 34.59
Gene sequence:
>798_bases ATGGGTAAATGTTGTAAAAATAACACTACTAAACAAGCTGAATCTACTACTAAAAAATTAGTAAGTAACTTTAAGTCATC GCTTTTGTGTGGAACAAAAGGGTTTTTGACTTTTAGTCTGGCATTTTTAAGTTATTTGGAATATAGTTCACATCATAATA CAAAATTAAAAGAAGGTGCTGCCTTTGCAATGAAAAGAAACACTATTCCATTTCTTGAAATGACAATCATAGCACCGCTT GTTTGTTTTGCACTGCCAGCTATGCTAGGCAGTATGAGCCTCATGCAATGCGCACTTTTATGTGCTGCCTTAATGATTGC CACATGTTTTATTGTCAGAACTTTTCATCTGCGTGAGAAGTTAATGGAAAAAATCACTAACCATAGTAGAAAAGAAATAG ACGCGGAATTTAAGAAAGATACTATAAAATTTCCTATTTTTGATCAAAATAGAAAACACATCGAGTATAATTCGCCCAAT TCAGGGCAACCACTGAATGAAACGAGTAGCACCTCTCTTTTCGTTAAAGTTTTACTTTTCCCTCTAAAGGTTCTTTTGAA GGTCCTGCAAAGTTGTATAATGCTATCTTTAGCTGCTGTTGAACTTCTTGAAACCGTGCCAAGTTTTTGTGTTGATCTGT TTTTTGATAGAAGTTTTGAATCCACACAGAGTAACATGCAGAGATTTGGCCACTTATTGTATGCAAATGTGAGAAATTTA GTGCCTATAACTAAATTTGATGAGTGTGTAGCTAATTTTATAGGTACCCCGAAAGTAACTTGTTGTAGTAGTGCGTAG
Upstream 100 bases:
>100_bases GTAAAATAGTATATTTATAGATTTATCTTATTATAAATTTTAATTTCATAAAAGTGATTTTTTATTTATAGTTAAGAATG AACTATCAAGGAGGTATTGT
Downstream 100 bases:
>100_bases GTGAAAAAGGCAGTTATCTTATTTAATCTTGGCGGGCCTGATTCACTAAATGCGGTCCGTCCTTTTTTATTCAACCTTTT TTATGACAGGAGAATAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MGKCCKNNTTKQAESTTKKLVSNFKSSLLCGTKGFLTFSLAFLSYLEYSSHHNTKLKEGAAFAMKRNTIPFLEMTIIAPL VCFALPAMLGSMSLMQCALLCAALMIATCFIVRTFHLREKLMEKITNHSRKEIDAEFKKDTIKFPIFDQNRKHIEYNSPN SGQPLNETSSTSLFVKVLLFPLKVLLKVLQSCIMLSLAAVELLETVPSFCVDLFFDRSFESTQSNMQRFGHLLYANVRNL VPITKFDECVANFIGTPKVTCCSSA
Sequences:
>Translated_265_residues MGKCCKNNTTKQAESTTKKLVSNFKSSLLCGTKGFLTFSLAFLSYLEYSSHHNTKLKEGAAFAMKRNTIPFLEMTIIAPL VCFALPAMLGSMSLMQCALLCAALMIATCFIVRTFHLREKLMEKITNHSRKEIDAEFKKDTIKFPIFDQNRKHIEYNSPN SGQPLNETSSTSLFVKVLLFPLKVLLKVLQSCIMLSLAAVELLETVPSFCVDLFFDRSFESTQSNMQRFGHLLYANVRNL VPITKFDECVANFIGTPKVTCCSSA >Mature_264_residues GKCCKNNTTKQAESTTKKLVSNFKSSLLCGTKGFLTFSLAFLSYLEYSSHHNTKLKEGAAFAMKRNTIPFLEMTIIAPLV CFALPAMLGSMSLMQCALLCAALMIATCFIVRTFHLREKLMEKITNHSRKEIDAEFKKDTIKFPIFDQNRKHIEYNSPNS GQPLNETSSTSLFVKVLLFPLKVLLKVLQSCIMLSLAAVELLETVPSFCVDLFFDRSFESTQSNMQRFGHLLYANVRNLV PITKFDECVANFIGTPKVTCCSSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29721; Mature: 29590
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKCCKNNTTKQAESTTKKLVSNFKSSLLCGTKGFLTFSLAFLSYLEYSSHHNTKLKEGA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH AFAMKRNTIPFLEMTIIAPLVCFALPAMLGSMSLMQCALLCAALMIATCFIVRTFHLREK HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMEKITNHSRKEIDAEFKKDTIKFPIFDQNRKHIEYNSPNSGQPLNETSSTSLFVKVLLF HHHHHHCCHHHHHHHHHHHCCEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHH PLKVLLKVLQSCIMLSLAAVELLETVPSFCVDLFFDRSFESTQSNMQRFGHLLYANVRNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC VPITKFDECVANFIGTPKVTCCSSA CCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GKCCKNNTTKQAESTTKKLVSNFKSSLLCGTKGFLTFSLAFLSYLEYSSHHNTKLKEGA CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH AFAMKRNTIPFLEMTIIAPLVCFALPAMLGSMSLMQCALLCAALMIATCFIVRTFHLREK HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMEKITNHSRKEIDAEFKKDTIKFPIFDQNRKHIEYNSPNSGQPLNETSSTSLFVKVLLF HHHHHHCCHHHHHHHHHHHCCEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHH PLKVLLKVLQSCIMLSLAAVELLETVPSFCVDLFFDRSFESTQSNMQRFGHLLYANVRNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC VPITKFDECVANFIGTPKVTCCSSA CCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA