| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630847
Identifier: 225630847
GI number: 225630847
Start: 1243240
End: 1244064
Strand: Direct
Name: 225630847
Synonym: WRi_011530
Alternate gene names: NA
Gene position: 1243240-1244064 (Clockwise)
Preceding gene: 225630846
Following gene: 225630851
Centisome position: 85.99
GC content: 33.58
Gene sequence:
>825_bases ATGAATACTACAGTAGAAAAAAATAATCCAAAAATTTTTCCTCAAAATGAAGGAAAGATTAACTCAAAAGGCATGGTTGC CCCACCTGTTCCTCCGAAATCTTCCCAAGCTAAATTTGCTGGAATAAAAGCAATTTTTGAGCGAAATGTACCTCATTCTC AAGCAAATGATAGTAATAAAACAGTGAGTAGCAATCTTGGAAGAACATTTGGCCCAACAATGCAAAAACTCATGGAAGAC AACATTCATAGCACTCCTAACAAACAACGCCGCAATTCAGGGGATAGTGGTATCAGTGATATTAGTAGCAGCACTTCTGA TGATGAGGATAGAACAATAAAAGATAAAATGATGGAAAATGTTAAGCAGGATAACCATCAAAAAAGCTTTGATTTACATA AAGTACAAGCAACTGATGAATTAGAAACCGTAAAATTTCTCAAAACGCTAAGCAAGAAAGAAAGAGAAAAACTTGGTTTT TCTCCTAAACAGCAAAATAACCAAAAGGTTGAGACTAGCAAAAAAACTTATAATCCACTTGATTGGAATCCAATCTATCA AGGTAAAAAGCTCTTTAGCTTAGGCAATATGTCGAGTAATTCGTCTTCATGTAGTGAAAAAAGCAATATTTCAGATGTAA GCGATAAGTCTAATAATTCAAACATTGTTAGATGTAATATTACTAGGAGTAACAGTAAGGAAGACCTTCGTAAACCTGAT GCTTCACATAATGACAAATCTGCAGGTAAAAAATTATCTAATGTCAATGTAAGCGAATTAATCAGAAAGTTTGAACAAGG TAATGACATAGTAAAAGGGCGTTAA
Upstream 100 bases:
>100_bases GATGCTTATTGAAACTGCGGTAATCTATTAGCATTGTTATTACAAAATTAATACCTCTAAGTTTATACTTTTATTAGTTA ATAGGTTTAGAGGTAAAAAA
Downstream 100 bases:
>100_bases TCAAATGTTACCCTATCTTTGTATATGTGAAGGTAGGGTATCTTTTCAAAATAGTATATCCTTTATAGCTTTGTTAATTT TTGACTCCCTCTCTGCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MNTTVEKNNPKIFPQNEGKINSKGMVAPPVPPKSSQAKFAGIKAIFERNVPHSQANDSNKTVSSNLGRTFGPTMQKLMED NIHSTPNKQRRNSGDSGISDISSSTSDDEDRTIKDKMMENVKQDNHQKSFDLHKVQATDELETVKFLKTLSKKEREKLGF SPKQQNNQKVETSKKTYNPLDWNPIYQGKKLFSLGNMSSNSSSCSEKSNISDVSDKSNNSNIVRCNITRSNSKEDLRKPD ASHNDKSAGKKLSNVNVSELIRKFEQGNDIVKGR
Sequences:
>Translated_274_residues MNTTVEKNNPKIFPQNEGKINSKGMVAPPVPPKSSQAKFAGIKAIFERNVPHSQANDSNKTVSSNLGRTFGPTMQKLMED NIHSTPNKQRRNSGDSGISDISSSTSDDEDRTIKDKMMENVKQDNHQKSFDLHKVQATDELETVKFLKTLSKKEREKLGF SPKQQNNQKVETSKKTYNPLDWNPIYQGKKLFSLGNMSSNSSSCSEKSNISDVSDKSNNSNIVRCNITRSNSKEDLRKPD ASHNDKSAGKKLSNVNVSELIRKFEQGNDIVKGR >Mature_274_residues MNTTVEKNNPKIFPQNEGKINSKGMVAPPVPPKSSQAKFAGIKAIFERNVPHSQANDSNKTVSSNLGRTFGPTMQKLMED NIHSTPNKQRRNSGDSGISDISSSTSDDEDRTIKDKMMENVKQDNHQKSFDLHKVQATDELETVKFLKTLSKKEREKLGF SPKQQNNQKVETSKKTYNPLDWNPIYQGKKLFSLGNMSSNSSSCSEKSNISDVSDKSNNSNIVRCNITRSNSKEDLRKPD ASHNDKSAGKKLSNVNVSELIRKFEQGNDIVKGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30620; Mature: 30620
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTVEKNNPKIFPQNEGKINSKGMVAPPVPPKSSQAKFAGIKAIFERNVPHSQANDSNK CCCCCCCCCCEECCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC TVSSNLGRTFGPTMQKLMEDNIHSTPNKQRRNSGDSGISDISSSTSDDEDRTIKDKMMEN HHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHH VKQDNHQKSFDLHKVQATDELETVKFLKTLSKKEREKLGFSPKQQNNQKVETSKKTYNPL HHHHCCHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC DWNPIYQGKKLFSLGNMSSNSSSCSEKSNISDVSDKSNNSNIVRCNITRSNSKEDLRKPD CCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCC ASHNDKSAGKKLSNVNVSELIRKFEQGNDIVKGR CCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNTTVEKNNPKIFPQNEGKINSKGMVAPPVPPKSSQAKFAGIKAIFERNVPHSQANDSNK CCCCCCCCCCEECCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC TVSSNLGRTFGPTMQKLMEDNIHSTPNKQRRNSGDSGISDISSSTSDDEDRTIKDKMMEN HHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHH VKQDNHQKSFDLHKVQATDELETVKFLKTLSKKEREKLGFSPKQQNNQKVETSKKTYNPL HHHHCCHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC DWNPIYQGKKLFSLGNMSSNSSSCSEKSNISDVSDKSNNSNIVRCNITRSNSKEDLRKPD CCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCC ASHNDKSAGKKLSNVNVSELIRKFEQGNDIVKGR CCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA