| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630771
Identifier: 225630771
GI number: 225630771
Start: 1157705
End: 1158934
Strand: Reverse
Name: 225630771
Synonym: WRi_010690
Alternate gene names: NA
Gene position: 1158934-1157705 (Counterclockwise)
Preceding gene: 225630772
Following gene: 225630766
Centisome position: 80.15
GC content: 35.2
Gene sequence:
>1230_bases ATGTTGCAGAGGAATTTTTTAGTCTGGCTGTTGGCGTCACTGTTTTATGCATACCAATATATATTACGCGTAATTCCAAA CATAATTGCGCCTGAATTGATAACAAAATTTAACATAAGTATTACAGATGTTGGCCAGTTTGGTGGGTTATACTATGTAG GCTATACGCTGGCTCACATACCTATTGGTCTTGCTCTTGACAAATTCGGGCCAAAATTTGTTTTGCCTATTTGTATTATC TTAACATTTACCGGAACATTACCACTTATATGCTTTGATGAGTGGTATTATTCAATACTTGGCAGAATAGTCGTTGGAAT TGGGTCATCCGCTTCAGCAATTGGGCTTTTTAAAGTTGCAAGCATGTATTTTGCGCAAGAAAAATCAGCAAGAATGGCCA GCTTATCTATAATTATAGGAATTTTGGGAGGGATATGTGGCGGGTTACCTTTAGACTTCTTACTCGATAAATTTGGCTGG AATTATGTTATCTATACATTCTCAGCATTTGGGTGTTTACTTGCTCTGTTGCTGTTCTTAGTAACGCCTGAAAGCAATGC TCAACAGGAAAAAGTTAGCATTAGAGACTTAAAAAACATACTTTTCAACAAGCATATTATTCTAATTAGCTTTTTTGGTG GACTCATGGTCGGTCCAATGCAAGGTTTTGCCGATGGTTGGGTGAAAACATTCTTTTTTGAAGTATATAAAATGAATGAA GACTTGGCATCTTCTCTCTCTTCCGTAATATTGATAGGAATGTTAATAGGATCATTCTCTTTGGCTTATTTATTGGAAAA ATATAAAAATAAGCATTATGAAGTAATAATTGCATGCTCATTTGCAATGATCGCTAGTTTTCTTTTGCTTTTTACTCAGA TTGGTGGCTTGTATGTTGTATTACCTACGCTTTTTATTATTGGCTTCACATCTGGATATCAGGTGGTTACCATTTACAAA GCGATAAGTTATGTAAATAATAACTTAGTAGGCCTGGCTACAGCTGTGTCAAACATGATAGTTATGGTTTTTGGCTATTT TTTTCACACTGGGATCGCAAAAATAGTAGATTTGTGTTGGGATAGAACAATAATACAAGGAAATCCTGTGTATGGTGCTG AATTGCTGATAAAAGCAACATCAGTTATTCCTGTATGTTTGCTGGTGGCTGTTTTTGGGCTCTTATGGTTAAAAAATAAA GATTTTAGAGAAGTTGATTGTAATAAGTAG
Upstream 100 bases:
>100_bases AGTTATAAGCTGTAAAAAGAGCTAAGCAGATTTAGATGATTAATATAGTATTGTTTTTTATAACTAAAGTATCTATAATC CTAAATTTTAGCTGAGATTC
Downstream 100 bases:
>100_bases ATAATTTATCGAAGGCTCGTATGATAAAATCGTTAGATGTACTAATTTAAGGCTCTTGTTATTATGAAATATAATACTTT ATTTTACTTTGATATTTTTG
Product: permease, putative
Products: NA
Alternate protein names: Facilitator Transporter; Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Permease; Sugar Phosphate Permease; Transporter MFS Superfamily; Facilitator Family Transporter Transporter; Sugar Transporter; Multidrug ABC Transporter; Facilitator Superfamily Sugar Transporter; NasA Protein; Bicyclomycin Resistance Protein; Facilitator Protein; Facilitator Membrane Proteins; Intraphagosomal Amino Acid Transporter Family Protein; Transport Proteins; Facilitator Superfamily Permease
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MLQRNFLVWLLASLFYAYQYILRVIPNIIAPELITKFNISITDVGQFGGLYYVGYTLAHIPIGLALDKFGPKFVLPICII LTFTGTLPLICFDEWYYSILGRIVVGIGSSASAIGLFKVASMYFAQEKSARMASLSIIIGILGGICGGLPLDFLLDKFGW NYVIYTFSAFGCLLALLLFLVTPESNAQQEKVSIRDLKNILFNKHIILISFFGGLMVGPMQGFADGWVKTFFFEVYKMNE DLASSLSSVILIGMLIGSFSLAYLLEKYKNKHYEVIIACSFAMIASFLLLFTQIGGLYVVLPTLFIIGFTSGYQVVTIYK AISYVNNNLVGLATAVSNMIVMVFGYFFHTGIAKIVDLCWDRTIIQGNPVYGAELLIKATSVIPVCLLVAVFGLLWLKNK DFREVDCNK
Sequences:
>Translated_409_residues MLQRNFLVWLLASLFYAYQYILRVIPNIIAPELITKFNISITDVGQFGGLYYVGYTLAHIPIGLALDKFGPKFVLPICII LTFTGTLPLICFDEWYYSILGRIVVGIGSSASAIGLFKVASMYFAQEKSARMASLSIIIGILGGICGGLPLDFLLDKFGW NYVIYTFSAFGCLLALLLFLVTPESNAQQEKVSIRDLKNILFNKHIILISFFGGLMVGPMQGFADGWVKTFFFEVYKMNE DLASSLSSVILIGMLIGSFSLAYLLEKYKNKHYEVIIACSFAMIASFLLLFTQIGGLYVVLPTLFIIGFTSGYQVVTIYK AISYVNNNLVGLATAVSNMIVMVFGYFFHTGIAKIVDLCWDRTIIQGNPVYGAELLIKATSVIPVCLLVAVFGLLWLKNK DFREVDCNK >Mature_409_residues MLQRNFLVWLLASLFYAYQYILRVIPNIIAPELITKFNISITDVGQFGGLYYVGYTLAHIPIGLALDKFGPKFVLPICII LTFTGTLPLICFDEWYYSILGRIVVGIGSSASAIGLFKVASMYFAQEKSARMASLSIIIGILGGICGGLPLDFLLDKFGW NYVIYTFSAFGCLLALLLFLVTPESNAQQEKVSIRDLKNILFNKHIILISFFGGLMVGPMQGFADGWVKTFFFEVYKMNE DLASSLSSVILIGMLIGSFSLAYLLEKYKNKHYEVIIACSFAMIASFLLLFTQIGGLYVVLPTLFIIGFTSGYQVVTIYK AISYVNNNLVGLATAVSNMIVMVFGYFFHTGIAKIVDLCWDRTIIQGNPVYGAELLIKATSVIPVCLLVAVFGLLWLKNK DFREVDCNK
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45449; Mature: 45449
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQRNFLVWLLASLFYAYQYILRVIPNIIAPELITKFNISITDVGQFGGLYYVGYTLAHI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHCCHHHHHHHHHHH PIGLALDKFGPKFVLPICIILTFTGTLPLICFDEWYYSILGRIVVGIGSSASAIGLFKVA HHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHH SMYFAQEKSARMASLSIIIGILGGICGGLPLDFLLDKFGWNYVIYTFSAFGCLLALLLFL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH VTPESNAQQEKVSIRDLKNILFNKHIILISFFGGLMVGPMQGFADGWVKTFFFEVYKMNE CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH DLASSLSSVILIGMLIGSFSLAYLLEKYKNKHYEVIIACSFAMIASFLLLFTQIGGLYVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHCCHHHH LPTLFIIGFTSGYQVVTIYKAISYVNNNLVGLATAVSNMIVMVFGYFFHTGIAKIVDLCW HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRTIIQGNPVYGAELLIKATSVIPVCLLVAVFGLLWLKNKDFREVDCNK CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLQRNFLVWLLASLFYAYQYILRVIPNIIAPELITKFNISITDVGQFGGLYYVGYTLAHI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHCCHHHHHHHHHHH PIGLALDKFGPKFVLPICIILTFTGTLPLICFDEWYYSILGRIVVGIGSSASAIGLFKVA HHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHH SMYFAQEKSARMASLSIIIGILGGICGGLPLDFLLDKFGWNYVIYTFSAFGCLLALLLFL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH VTPESNAQQEKVSIRDLKNILFNKHIILISFFGGLMVGPMQGFADGWVKTFFFEVYKMNE CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH DLASSLSSVILIGMLIGSFSLAYLLEKYKNKHYEVIIACSFAMIASFLLLFTQIGGLYVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHCCHHHH LPTLFIIGFTSGYQVVTIYKAISYVNNNLVGLATAVSNMIVMVFGYFFHTGIAKIVDLCW HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRTIIQGNPVYGAELLIKATSVIPVCLLVAVFGLLWLKNKDFREVDCNK CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA