| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is yieO [C]
Identifier: 225630772
GI number: 225630772
Start: 1159010
End: 1160224
Strand: Reverse
Name: yieO [C]
Synonym: WRi_010700
Alternate gene names: 225630772
Gene position: 1160224-1159010 (Counterclockwise)
Preceding gene: 225630774
Following gene: 225630771
Centisome position: 80.24
GC content: 31.03
Gene sequence:
>1215_bases TTGCAGAGGAATTTTTTAATCTGGTTGTTGGCGTCACTGTTTTATGCATACCAATATATATTACGCGTAATTCCAAATAT TATAATTCCTGAATTGGTAGTAAGGTTTAATATAGGAACAACAGAAATAGGACAATTTTGTGGACTGTATTATGTAGGTT ATGTGTTAGCACATATTCCTGTAGGTATTCTTTTAGATAGATTTGGTTCTAAAGTTGTTATACCGATTTGTATTGCATTA ACATCTTTAGGTGCTTTACCTTTAGTCAGTTCTAATGATTGGAGTTATTCTATTATTGGAAGAATAATTACTGGTATTGG ATCCTCTGCTTCAGTACTTGGACTCTTTAAAATAATAAGTATTTATTACCGTAGAGAAAAATTTGCCATGATGTTTAGTA TATCAGCTATTATTGGCATCTCAGGTGGTGTATTTGCCACTAAACCGTTACATATCTTATTTAATAAGTTTGGGTGGGAC TATGTGTTTGTTACATTTATAACACTGGGATTGTTGCTTGCTCTTGTTTCCTTTATGTTTATACCCAAAATTGATACTTC AGAAGAAAGATTAAATATTAAAAGTTTAAGTGAAGTTATATTCAATAAAAATGTTCTATTAATAAGTTTATTTGGTGGCT TTATGGTTGGACCATTGGAAGGGTTTACAGATGTATGGTCTGCAACATTCTTGCATGAGATGTATGCTATAGATAGACAG GTTGCATACAATATTTCAAAATGGATACTGATAGGCTTTGGTTTTGGATATTTATCACTTTCTTACTTACTAGAAAAAAA ACCAACCAAACACTATGAGATAATAATTTCTTGTGCTATGGCTATGATAATTGTGTTTTTATTACTTTTTATATGTAACA TTAATTCACTTTTAGCATCCATATTACTATTCATAGTTGGTTTTGCTTCTGCGTACCAAATTGTTTTGACTGCCAAAGTT GTAAATCTTGTGAAGGATGATGCGGTAGCAAGTGCAGGATCTGTAAGTAATGCTATAGTTATGAGTTTTGGCTATTTTTT TCATACCGTTATTGCAAATATAATGAATTTTTATTGGGATGGTAAGATCGTTGATGAAAAACCGCTTTATGGAGCCGATG TAATGGTTAAATCTATGTTAATAATACCTATATGTTTACTAATAGGTATGATAGGCTTTTGGCTACTTAAAGTTATAAGC TGTAAAAAGAGCTAA
Upstream 100 bases:
>100_bases AGTTCAACTGTATAAAATTCCGGTAAATTAAAATAAGTATTCATAAAAATATTGTTTTCTATAAACAGAGTATCTATAAT ACTAGCTTTGGGGTAAAGTA
Downstream 100 bases:
>100_bases GCAGATTTAGATGATTAATATAGTATTGTTTTTTATAACTAAAGTATCTATAATCCTAAATTTTAGCTGAGATTCATGTT GCAGAGGAATTTTTTAGTCT
Product: permease, putative
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: Facilitator Transporter; Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Permease; Facilitator Family Transporter Transporter; Sugar Phosphate Permease; Sugar Transporter; Multidrug ABC Transporter; Facilitator Superfamily Sugar Transporter; NasA Protein; Bicyclomycin Resistance Protein; Facilitator Membrane Proteins; Intraphagosomal Amino Acid Transporter Family Protein; Transporter MFS Superfamily; Facilitator Family Protein; Facilitator Superfamily Permease
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MQRNFLIWLLASLFYAYQYILRVIPNIIIPELVVRFNIGTTEIGQFCGLYYVGYVLAHIPVGILLDRFGSKVVIPICIAL TSLGALPLVSSNDWSYSIIGRIITGIGSSASVLGLFKIISIYYRREKFAMMFSISAIIGISGGVFATKPLHILFNKFGWD YVFVTFITLGLLLALVSFMFIPKIDTSEERLNIKSLSEVIFNKNVLLISLFGGFMVGPLEGFTDVWSATFLHEMYAIDRQ VAYNISKWILIGFGFGYLSLSYLLEKKPTKHYEIIISCAMAMIIVFLLLFICNINSLLASILLFIVGFASAYQIVLTAKV VNLVKDDAVASAGSVSNAIVMSFGYFFHTVIANIMNFYWDGKIVDEKPLYGADVMVKSMLIIPICLLIGMIGFWLLKVIS CKKS
Sequences:
>Translated_404_residues MQRNFLIWLLASLFYAYQYILRVIPNIIIPELVVRFNIGTTEIGQFCGLYYVGYVLAHIPVGILLDRFGSKVVIPICIAL TSLGALPLVSSNDWSYSIIGRIITGIGSSASVLGLFKIISIYYRREKFAMMFSISAIIGISGGVFATKPLHILFNKFGWD YVFVTFITLGLLLALVSFMFIPKIDTSEERLNIKSLSEVIFNKNVLLISLFGGFMVGPLEGFTDVWSATFLHEMYAIDRQ VAYNISKWILIGFGFGYLSLSYLLEKKPTKHYEIIISCAMAMIIVFLLLFICNINSLLASILLFIVGFASAYQIVLTAKV VNLVKDDAVASAGSVSNAIVMSFGYFFHTVIANIMNFYWDGKIVDEKPLYGADVMVKSMLIIPICLLIGMIGFWLLKVIS CKKS >Mature_404_residues MQRNFLIWLLASLFYAYQYILRVIPNIIIPELVVRFNIGTTEIGQFCGLYYVGYVLAHIPVGILLDRFGSKVVIPICIAL TSLGALPLVSSNDWSYSIIGRIITGIGSSASVLGLFKIISIYYRREKFAMMFSISAIIGISGGVFATKPLHILFNKFGWD YVFVTFITLGLLLALVSFMFIPKIDTSEERLNIKSLSEVIFNKNVLLISLFGGFMVGPLEGFTDVWSATFLHEMYAIDRQ VAYNISKWILIGFGFGYLSLSYLLEKKPTKHYEIIISCAMAMIIVFLLLFICNINSLLASILLFIVGFASAYQIVLTAKV VNLVKDDAVASAGSVSNAIVMSFGYFFHTVIANIMNFYWDGKIVDEKPLYGADVMVKSMLIIPICLLIGMIGFWLLKVIS CKKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45101; Mature: 45101
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRNFLIWLLASLFYAYQYILRVIPNIIIPELVVRFNIGTTEIGQFCGLYYVGYVLAHIP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VGILLDRFGSKVVIPICIALTSLGALPLVSSNDWSYSIIGRIITGIGSSASVLGLFKIIS HHHHHHHCCCCHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH IYYRREKFAMMFSISAIIGISGGVFATKPLHILFNKFGWDYVFVTFITLGLLLALVSFMF HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH IPKIDTSEERLNIKSLSEVIFNKNVLLISLFGGFMVGPLEGFTDVWSATFLHEMYAIDRQ CCCCCCCHHHCCHHHHHHHHHCCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VAYNISKWILIGFGFGYLSLSYLLEKKPTKHYEIIISCAMAMIIVFLLLFICNINSLLAS HHHHHHHHHHEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH ILLFIVGFASAYQIVLTAKVVNLVKDDAVASAGSVSNAIVMSFGYFFHTVIANIMNFYWD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GKIVDEKPLYGADVMVKSMLIIPICLLIGMIGFWLLKVISCKKS CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQRNFLIWLLASLFYAYQYILRVIPNIIIPELVVRFNIGTTEIGQFCGLYYVGYVLAHIP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VGILLDRFGSKVVIPICIALTSLGALPLVSSNDWSYSIIGRIITGIGSSASVLGLFKIIS HHHHHHHCCCCHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH IYYRREKFAMMFSISAIIGISGGVFATKPLHILFNKFGWDYVFVTFITLGLLLALVSFMF HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH IPKIDTSEERLNIKSLSEVIFNKNVLLISLFGGFMVGPLEGFTDVWSATFLHEMYAIDRQ CCCCCCCHHHCCHHHHHHHHHCCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VAYNISKWILIGFGFGYLSLSYLLEKKPTKHYEIIISCAMAMIIVFLLLFICNINSLLAS HHHHHHHHHHEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH ILLFIVGFASAYQIVLTAKVVNLVKDDAVASAGSVSNAIVMSFGYFFHTVIANIMNFYWD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GKIVDEKPLYGADVMVKSMLIIPICLLIGMIGFWLLKVISCKKS CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA