| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is mnmG [H]
Identifier: 225630672
GI number: 225630672
Start: 1031400
End: 1033334
Strand: Reverse
Name: mnmG [H]
Synonym: WRi_009600
Alternate gene names: 225630672
Gene position: 1033334-1031400 (Counterclockwise)
Preceding gene: 225630677
Following gene: 225630671
Centisome position: 71.47
GC content: 39.48
Gene sequence:
>1935_bases ATGCATAAATATGATGTAGTAGTAGTAGGTGGTGGTCATGCAGGGTGCGAAGCGGCTGCTGCGGCAGCTCGCCTTGGTAC AAACACGCTGCTTATAACTCATAAAATTTCAACTATAGGGGAAATGTCCTGCAATCCAGCAATCGGAGGAGTTGCAAAGG GTGTTGTAGTCAGGGAAGTTGACGCTCTTGATGGAATAATGGGAAGAGCAATCGACCGAGCAAGCATACACTCAGTCATT TTAAATAGCAGCAGAGGTGCGGCAGTGTGGGGACCACGTGCACAGGCAGATCGAAAATTATACAAGCAAGCAATACAGGA AATTATTCTAAATTATAACAATTTGACGGTAAAAGAAGAGTCAGTTGACGATTTCCTTATAGAGAGTAATAACAATGGAG AATTGTGCATTAAAGCTGTAATAACAAGCTCAGGGGAACATATACTAACAGGTAAAGTCGTTTTAACCACAGGAACTTTT CTGCAAGGTGTAATTCATATAGGAGAACAAACAACCCCTTCAGGGAGAATGGGAGATAAGCCTGCAGTAGAACTTGCAAA TACGTTGAATAAATATGATTTTAGATTAGGTAGACTGCGTACCGGAACTCCACCAAGGCTTGATCGTGGCACTATAAATT GGTCAATATTGCAAGAACAAGTGGGTGATAATCCACCTGTGCCGTTTTCTTATCTCACAGAAAAAATTAACCAACCTCAG GTATCATGCTTTATTACCCATACTAATGAAAATACGCATAAAATAATTAGAGAAAATCTTCATAGGTCAGCTTCTTCGTA TCTAAGTGACGTTGTTGCGCCAAGATACTGCCCATCCATTGAAGTTAAAGTGAAAAAATTCGCAGAAAAAAGTAGCCACC AAATATTTTTAGAACCAGAAGGCCTGGATGATGATACTGTATACCCGAACGGAATTTCAAATTCATTGCCCATTGAAGTG CAGCGTGAAATGATAAAGAGTATCAAGGGACTTGAAAATGCAGAAATACTAAGACCTGGATATGCAGTTGAGTATGACTA TATTGACCCACGAGAGCTGTTTCATACTCTTGAAACCAAGAAAGTCAAAGGCCTATATTTTGCTGGCCAAATTAATGGCA CCACTGGATATGAAGAAGCAGCAGGGCAAGGAATTATCGCCGGAATTAATGCAGCACTCTCTGCATTTGAAAAAAAAGAA AGCTTTGTTCTCCATCGTACAGATTCGTATATCGGTGTAATGATAGATGATCTAGTCACTAAAGGGGTGATCGAACCTTA TAGATTATTTACCTCGCGTGCAGAATATAGGCTAGCTATCAGGTCAGACAATGCAGATAGAAGATTAACACAAAAAGGTT ATGATATTTCCCTTGTTTCGCATGAGAGATACTCTGTTTTACAGAATAAACTTGAATCCATTAAGCAGCTTGAAGAGAAG TTAGGGAGTCTGACGATTACTCCTGAGCAGCTTAGGTCTTATGGTATCAAAATATCTTATGATGGGATAAGAAAAACGGC ACTAGATTTACTTAGCTATCCAAACATCGACTGGAATAAATTACAAGAAATATGGCCGGAGTTAAGCAGCGTCACGCGCT GGAATGACAAAATGGGACACACCAAAGCGGATAATAGAGCTAAGAATGAAATATGCGAAGCGGTTGAAATTGAAGCAAAA TACAAACCTTATCTAATAAGACAAGAAGCGGATATGAAGTTTTTACGAGAGGAAATTAACACTCAAATTCCAATTGATTT CAACTATTCACAAGTTAAAGGCCTGTCAAGTGAAGTAATAGAAAAGTTGCAGACGATAAAACCAGCGACGATTGGCATTG CAAAGCAAATACAAGGCATCACTCCCGCAGCGATAGTGAGCATATTAGTGTATTTGAGAAACAGGAAAACGAAAGTGGCT GCTAATTTTGTATGA
Upstream 100 bases:
>100_bases TACATTAGCCACTGATGATTGAAATAGTTAATTACTGTAAAATTTGACATTAACCGCTAATAGTTAGAATATTAGTAGAG TAAGAATTACTCAAGAAGGC
Downstream 100 bases:
>100_bases GGTGTTCTATGTCAAAAATCGAAGAATTTCGTTCTTTTATGCACGAGATAAACGTTGATGCATTTATGTTGCATACTAAA GATGAATATTTAAATGAGTA
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 644; Mature: 644
Protein sequence:
>644_residues MHKYDVVVVGGGHAGCEAAAAAARLGTNTLLITHKISTIGEMSCNPAIGGVAKGVVVREVDALDGIMGRAIDRASIHSVI LNSSRGAAVWGPRAQADRKLYKQAIQEIILNYNNLTVKEESVDDFLIESNNNGELCIKAVITSSGEHILTGKVVLTTGTF LQGVIHIGEQTTPSGRMGDKPAVELANTLNKYDFRLGRLRTGTPPRLDRGTINWSILQEQVGDNPPVPFSYLTEKINQPQ VSCFITHTNENTHKIIRENLHRSASSYLSDVVAPRYCPSIEVKVKKFAEKSSHQIFLEPEGLDDDTVYPNGISNSLPIEV QREMIKSIKGLENAEILRPGYAVEYDYIDPRELFHTLETKKVKGLYFAGQINGTTGYEEAAGQGIIAGINAALSAFEKKE SFVLHRTDSYIGVMIDDLVTKGVIEPYRLFTSRAEYRLAIRSDNADRRLTQKGYDISLVSHERYSVLQNKLESIKQLEEK LGSLTITPEQLRSYGIKISYDGIRKTALDLLSYPNIDWNKLQEIWPELSSVTRWNDKMGHTKADNRAKNEICEAVEIEAK YKPYLIRQEADMKFLREEINTQIPIDFNYSQVKGLSSEVIEKLQTIKPATIGIAKQIQGITPAAIVSILVYLRNRKTKVA ANFV
Sequences:
>Translated_644_residues MHKYDVVVVGGGHAGCEAAAAAARLGTNTLLITHKISTIGEMSCNPAIGGVAKGVVVREVDALDGIMGRAIDRASIHSVI LNSSRGAAVWGPRAQADRKLYKQAIQEIILNYNNLTVKEESVDDFLIESNNNGELCIKAVITSSGEHILTGKVVLTTGTF LQGVIHIGEQTTPSGRMGDKPAVELANTLNKYDFRLGRLRTGTPPRLDRGTINWSILQEQVGDNPPVPFSYLTEKINQPQ VSCFITHTNENTHKIIRENLHRSASSYLSDVVAPRYCPSIEVKVKKFAEKSSHQIFLEPEGLDDDTVYPNGISNSLPIEV QREMIKSIKGLENAEILRPGYAVEYDYIDPRELFHTLETKKVKGLYFAGQINGTTGYEEAAGQGIIAGINAALSAFEKKE SFVLHRTDSYIGVMIDDLVTKGVIEPYRLFTSRAEYRLAIRSDNADRRLTQKGYDISLVSHERYSVLQNKLESIKQLEEK LGSLTITPEQLRSYGIKISYDGIRKTALDLLSYPNIDWNKLQEIWPELSSVTRWNDKMGHTKADNRAKNEICEAVEIEAK YKPYLIRQEADMKFLREEINTQIPIDFNYSQVKGLSSEVIEKLQTIKPATIGIAKQIQGITPAAIVSILVYLRNRKTKVA ANFV >Mature_644_residues MHKYDVVVVGGGHAGCEAAAAAARLGTNTLLITHKISTIGEMSCNPAIGGVAKGVVVREVDALDGIMGRAIDRASIHSVI LNSSRGAAVWGPRAQADRKLYKQAIQEIILNYNNLTVKEESVDDFLIESNNNGELCIKAVITSSGEHILTGKVVLTTGTF LQGVIHIGEQTTPSGRMGDKPAVELANTLNKYDFRLGRLRTGTPPRLDRGTINWSILQEQVGDNPPVPFSYLTEKINQPQ VSCFITHTNENTHKIIRENLHRSASSYLSDVVAPRYCPSIEVKVKKFAEKSSHQIFLEPEGLDDDTVYPNGISNSLPIEV QREMIKSIKGLENAEILRPGYAVEYDYIDPRELFHTLETKKVKGLYFAGQINGTTGYEEAAGQGIIAGINAALSAFEKKE SFVLHRTDSYIGVMIDDLVTKGVIEPYRLFTSRAEYRLAIRSDNADRRLTQKGYDISLVSHERYSVLQNKLESIKQLEEK LGSLTITPEQLRSYGIKISYDGIRKTALDLLSYPNIDWNKLQEIWPELSSVTRWNDKMGHTKADNRAKNEICEAVEIEAK YKPYLIRQEADMKFLREEINTQIPIDFNYSQVKGLSSEVIEKLQTIKPATIGIAKQIQGITPAAIVSILVYLRNRKTKVA ANFV
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=652, Percent_Identity=45.7055214723926, Blast_Score=557, Evalue=1e-158, Organism=Homo sapiens, GI19882217, Length=677, Percent_Identity=44.0177252584933, Blast_Score=543, Evalue=1e-154, Organism=Homo sapiens, GI183227703, Length=692, Percent_Identity=43.0635838150289, Blast_Score=538, Evalue=1e-153, Organism=Escherichia coli, GI2367273, Length=639, Percent_Identity=49.452269170579, Blast_Score=596, Evalue=1e-171, Organism=Caenorhabditis elegans, GI17534255, Length=637, Percent_Identity=41.7582417582418, Blast_Score=484, Evalue=1e-137, Organism=Saccharomyces cerevisiae, GI6321202, Length=644, Percent_Identity=43.944099378882, Blast_Score=561, Evalue=1e-160, Organism=Drosophila melanogaster, GI24658174, Length=647, Percent_Identity=46.8315301391036, Blast_Score=553, Evalue=1e-157,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 71651; Mature: 71651
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKYDVVVVGGGHAGCEAAAAAARLGTNTLLITHKISTIGEMSCNPAIGGVAKGVVVREV CCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEHHHHHCCCCCCCCCHHHCCHHEEHH DALDGIMGRAIDRASIHSVILNSSRGAAVWGPRAQADRKLYKQAIQEIILNYNNLTVKEE HHHHHHHHHHHHHHHHHHHHEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECC SVDDFLIESNNNGELCIKAVITSSGEHILTGKVVLTTGTFLQGVIHIGEQTTPSGRMGDK CCCCEEEECCCCCCEEEEEEECCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCC PAVELANTLNKYDFRLGRLRTGTPPRLDRGTINWSILQEQVGDNPPVPFSYLTEKINQPQ HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCC VSCFITHTNENTHKIIRENLHRSASSYLSDVVAPRYCPSIEVKVKKFAEKSSHQIFLEPE EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEECCC GLDDDTVYPNGISNSLPIEVQREMIKSIKGLENAEILRPGYAVEYDYIDPRELFHTLETK CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCEEEECCCCHHHHHHHHHHH KVKGLYFAGQINGTTGYEEAAGQGIIAGINAALSAFEKKESFVLHRTDSYIGVMIDDLVT HCCEEEEEEEECCCCCCHHHCCCCEEEHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH KGVIEPYRLFTSRAEYRLAIRSDNADRRLTQKGYDISLVSHERYSVLQNKLESIKQLEEK HCCCHHHHHHHCCCCEEEEEECCCCHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHH LGSLTITPEQLRSYGIKISYDGIRKTALDLLSYPNIDWNKLQEIWPELSSVTRWNDKMGH HCCEEECHHHHHHCCCEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC TKADNRAKNEICEAVEIEAKYKPYLIRQEADMKFLREEINTQIPIDFNYSQVKGLSSEVI CCCCCHHHHHHHHHHEECCCCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHH EKLQTIKPATIGIAKQIQGITPAAIVSILVYLRNRKTKVAANFV HHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCC >Mature Secondary Structure MHKYDVVVVGGGHAGCEAAAAAARLGTNTLLITHKISTIGEMSCNPAIGGVAKGVVVREV CCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEHHHHHCCCCCCCCCHHHCCHHEEHH DALDGIMGRAIDRASIHSVILNSSRGAAVWGPRAQADRKLYKQAIQEIILNYNNLTVKEE HHHHHHHHHHHHHHHHHHHHEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECC SVDDFLIESNNNGELCIKAVITSSGEHILTGKVVLTTGTFLQGVIHIGEQTTPSGRMGDK CCCCEEEECCCCCCEEEEEEECCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCC PAVELANTLNKYDFRLGRLRTGTPPRLDRGTINWSILQEQVGDNPPVPFSYLTEKINQPQ HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCC VSCFITHTNENTHKIIRENLHRSASSYLSDVVAPRYCPSIEVKVKKFAEKSSHQIFLEPE EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEECCC GLDDDTVYPNGISNSLPIEVQREMIKSIKGLENAEILRPGYAVEYDYIDPRELFHTLETK CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCEEEECCCCHHHHHHHHHHH KVKGLYFAGQINGTTGYEEAAGQGIIAGINAALSAFEKKESFVLHRTDSYIGVMIDDLVT HCCEEEEEEEECCCCCCHHHCCCCEEEHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH KGVIEPYRLFTSRAEYRLAIRSDNADRRLTQKGYDISLVSHERYSVLQNKLESIKQLEEK HCCCHHHHHHHCCCCEEEEEECCCCHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHH LGSLTITPEQLRSYGIKISYDGIRKTALDLLSYPNIDWNKLQEIWPELSSVTRWNDKMGH HCCEEECHHHHHHCCCEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC TKADNRAKNEICEAVEIEAKYKPYLIRQEADMKFLREEINTQIPIDFNYSQVKGLSSEVI CCCCCHHHHHHHHHHEECCCCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHH EKLQTIKPATIGIAKQIQGITPAAIVSILVYLRNRKTKVAANFV HHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA