Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

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The map label for this gene is 225630677

Identifier: 225630677

GI number: 225630677

Start: 1042744

End: 1043937

Strand: Reverse

Name: 225630677

Synonym: WRi_009700

Alternate gene names: NA

Gene position: 1043937-1042744 (Counterclockwise)

Preceding gene: 225630678

Following gene: 225630672

Centisome position: 72.2

GC content: 39.95

Gene sequence:

>1194_bases
ATGAATTTCAACATCTTTCAAAGAAAAAAAAGCGCAGTATTTACTAAATATTCTGCTTTGCAGCTAATGATGGAGCCAAG
TTGGAGTAAGCGTGATTATGTAAGTTTTGCTGAGGAAGGTTACATAAAAAATGTTATTGCCTTTCGAGCAATCAATATGA
TTGCAAGTGCTGCATCTTCGGTACCTCTTACTCTCTGCCAGCTTACTGACCAGGGAAAATCGCAACTAAAAGCCCATCCA
TTACTGAAATTACTTTATTCTCCTAACCCAATGACATCAAAATCGGAATTTATTGAGGGGATTGTAACTTATCGGTTAGT
TAACGGCAATTCTTATATATTGATGGTTGAGTCGCAGAACAATAGAAAACCACCAACAGAGCTTTATCTTCTGCGCCCAG
ATAGGGTTGAAATTGTTCCAGGGAGAAATAACGTTCCTTATATCTATCGTTATGCCATAAATAACAACAGTTATGACTTT
AAAGTTGATAAACTAACTGGATGTTCAGCAGTGTTGCACTTAAAGACCTTTAATCCTTTGAATGATTGGTATGGGCTATC
ACCAATTGAGGCAGCTGCATATAGCATAGATCAGCATAATCAGGCGGGTGCTTGGAATCAAGCGATGTTGCAAAACGGAG
CAAGACCAAGTGGTGCAATAGTTGTGAAATCAGCGAAAGATGGAAGTGGTGGAAGTTTAAGTCAAGAGCAGTACCAACGC
TTAAAAGCGCAAATAAATGATCATTATTCAGGTTCTATAAACGCTGGAAGACCGATATTGCTTGAAGGAGGCTTGGAGTG
GAAGGAAATGAGCTTATCACCAAGGGATATGGATTTTATTGAGTCCAAACACAGTTCAGCTCGTGATATTGCCCTGGCTT
TTGGCGTTCCGCCGCAGTTGCTTGGCATACCAGGTGATAACACTTATAGCAATTTAGTCGAAGCACGCCTGTCCCTTTGG
GAGCAGACGGTTTTACCAACGCTAGAAAATATTATCTGTCACCTGAATTCTTGGCTGATACCAAGATTTGGTGAAGATCT
GTGCTTGTCGTATGACAAAGATACAATAGAAATTCTCATGGAAAAGAGACAAAAGTTGTGGAAATACGTAGAAAATGCAA
GCTTTATGACACTCAATGAAAAAAGGGAAGCATTTGGCTTGCCACCACAGCCAGGTGGTGATAAATTGAGTTGA

Upstream 100 bases:

>100_bases
AGAGATTGCTCTCAAACATAATGTTCGTACGTTAGTATATCCTTCCTGTGACACCAATTGATATAATTCTACCACAAATT
CAATTTTTTAGGAGGCACAT

Downstream 100 bases:

>100_bases
AGTTTTGATGTTTATTACTTATAGCTAAACTGACTTAGATTTATCGACAATTTGAAAAACCGTCATTCCGCTACTAGTTA
GCGGAATCTATACCGCGAAT

Product: phage portal protein, HK97 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MNFNIFQRKKSAVFTKYSALQLMMEPSWSKRDYVSFAEEGYIKNVIAFRAINMIASAASSVPLTLCQLTDQGKSQLKAHP
LLKLLYSPNPMTSKSEFIEGIVTYRLVNGNSYILMVESQNNRKPPTELYLLRPDRVEIVPGRNNVPYIYRYAINNNSYDF
KVDKLTGCSAVLHLKTFNPLNDWYGLSPIEAAAYSIDQHNQAGAWNQAMLQNGARPSGAIVVKSAKDGSGGSLSQEQYQR
LKAQINDHYSGSINAGRPILLEGGLEWKEMSLSPRDMDFIESKHSSARDIALAFGVPPQLLGIPGDNTYSNLVEARLSLW
EQTVLPTLENIICHLNSWLIPRFGEDLCLSYDKDTIEILMEKRQKLWKYVENASFMTLNEKREAFGLPPQPGGDKLS

Sequences:

>Translated_397_residues
MNFNIFQRKKSAVFTKYSALQLMMEPSWSKRDYVSFAEEGYIKNVIAFRAINMIASAASSVPLTLCQLTDQGKSQLKAHP
LLKLLYSPNPMTSKSEFIEGIVTYRLVNGNSYILMVESQNNRKPPTELYLLRPDRVEIVPGRNNVPYIYRYAINNNSYDF
KVDKLTGCSAVLHLKTFNPLNDWYGLSPIEAAAYSIDQHNQAGAWNQAMLQNGARPSGAIVVKSAKDGSGGSLSQEQYQR
LKAQINDHYSGSINAGRPILLEGGLEWKEMSLSPRDMDFIESKHSSARDIALAFGVPPQLLGIPGDNTYSNLVEARLSLW
EQTVLPTLENIICHLNSWLIPRFGEDLCLSYDKDTIEILMEKRQKLWKYVENASFMTLNEKREAFGLPPQPGGDKLS
>Mature_397_residues
MNFNIFQRKKSAVFTKYSALQLMMEPSWSKRDYVSFAEEGYIKNVIAFRAINMIASAASSVPLTLCQLTDQGKSQLKAHP
LLKLLYSPNPMTSKSEFIEGIVTYRLVNGNSYILMVESQNNRKPPTELYLLRPDRVEIVPGRNNVPYIYRYAINNNSYDF
KVDKLTGCSAVLHLKTFNPLNDWYGLSPIEAAAYSIDQHNQAGAWNQAMLQNGARPSGAIVVKSAKDGSGGSLSQEQYQR
LKAQINDHYSGSINAGRPILLEGGLEWKEMSLSPRDMDFIESKHSSARDIALAFGVPPQLLGIPGDNTYSNLVEARLSLW
EQTVLPTLENIICHLNSWLIPRFGEDLCLSYDKDTIEILMEKRQKLWKYVENASFMTLNEKREAFGLPPQPGGDKLS

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. HK97 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006427 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 44687; Mature: 44687

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFNIFQRKKSAVFTKYSALQLMMEPSWSKRDYVSFAEEGYIKNVIAFRAINMIASAASS
CCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
VPLTLCQLTDQGKSQLKAHPLLKLLYSPNPMTSKSEFIEGIVTYRLVNGNSYILMVESQN
CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEEEECCCEEEEEEECCC
NRKPPTELYLLRPDRVEIVPGRNNVPYIYRYAINNNSYDFKVDKLTGCSAVLHLKTFNPL
CCCCCCEEEEECCCCEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEEEECCCC
NDWYGLSPIEAAAYSIDQHNQAGAWNQAMLQNGARPSGAIVVKSAKDGSGGSLSQEQYQR
HHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHH
LKAQINDHYSGSINAGRPILLEGGLEWKEMSLSPRDMDFIESKHSSARDIALAFGVPPQL
HHHHHCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCHHHHHHCCCCCCEEEEEECCCHHH
LGIPGDNTYSNLVEARLSLWEQTVLPTLENIICHLNSWLIPRFGEDLCLSYDKDTIEILM
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCHHHHHHH
EKRQKLWKYVENASFMTLNEKREAFGLPPQPGGDKLS
HHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNFNIFQRKKSAVFTKYSALQLMMEPSWSKRDYVSFAEEGYIKNVIAFRAINMIASAASS
CCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
VPLTLCQLTDQGKSQLKAHPLLKLLYSPNPMTSKSEFIEGIVTYRLVNGNSYILMVESQN
CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEEEECCCEEEEEEECCC
NRKPPTELYLLRPDRVEIVPGRNNVPYIYRYAINNNSYDFKVDKLTGCSAVLHLKTFNPL
CCCCCCEEEEECCCCEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEEEECCCC
NDWYGLSPIEAAAYSIDQHNQAGAWNQAMLQNGARPSGAIVVKSAKDGSGGSLSQEQYQR
HHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHH
LKAQINDHYSGSINAGRPILLEGGLEWKEMSLSPRDMDFIESKHSSARDIALAFGVPPQL
HHHHHCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCHHHHHHCCCCCCEEEEEECCCHHH
LGIPGDNTYSNLVEARLSLWEQTVLPTLENIICHLNSWLIPRFGEDLCLSYDKDTIEILM
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCHHHHHHH
EKRQKLWKYVENASFMTLNEKREAFGLPPQPGGDKLS
HHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA