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The map label for this gene is 225630530

Identifier: 225630530

GI number: 225630530

Start: 844069

End: 844731

Strand: Reverse

Name: 225630530

Synonym: WRi_007830

Alternate gene names: NA

Gene position: 844731-844069 (Counterclockwise)

Preceding gene: 225630531

Following gene: 225630524

Centisome position: 58.42

GC content: 31.22

Gene sequence:

>663_bases
ATGGAAGATAAATTGCTTGAATCAGTAAAAAACAAAAGTTATTTCAGTAAAGCAGTCGAATGGTACTGCCATAGGTATCT
GTTTTGTGTAGCAGAAAGATCTTGGATGGCATTAATAGTATCGCTTCTCCTAGTATGCTTATGTTTATTAACATTAAACA
TATACCTGTTATTTCCTGTTAAAAAAGATTTAAATTTTGTGAAGTATATGAACCACACAGAAGATGAGTTCTCTGCAATG
CATAAGCTTAGTTTCAGTAAAAAGGAAGATGAATACACTTCCACAGCGAGGTACTTAATAAGTAAATACATTGAAATATA
CGAGTCCATTAAGACCGTTGAACCGAAGTACCAAGAAAATTTTATAAGAAACAATTCTATACATAAAATCTATCAAGGCT
TTCAGGAAAAAACGAATAATGAAGCTGGTAATTTGTCTTTATCTAAAAGAAAAATCGCCAACATAAATGTAATAACATTA
TCTATTGATCGATCGACCAAGGACTTAGTTACATTTGCTGGAAATGCTACTGTAGTTTTTACAACCGAGCAAAATAAGGA
GGATACTGTGGAGATTAGCTTCACTTTGTCGAATATAAAAGCAACTCTGGCTGGTATAATACCATTTAAATTTATTGTTA
ATGGTTATAAATACAGATTTTAA

Upstream 100 bases:

>100_bases
ATAATCATTCATCCTATTTTGGAAAATTTAGACATATTTTAAAGTTTTTTAGAGTATCTAATCTTGTTGTTATTATAATT
GGATTTGGTAGCATTGTGTT

Downstream 100 bases:

>100_bases
AATATTACTTGGTAGCTAAAAAAAATAACCAAAGTGCACATAGCAGTAATAACTGGAGGTAAAACTAGAAGAATTGGCGT
TTTTTTAATAAAGTAATTCT

Product: type IV secretion system protein VirB8, putative

Products: NA

Alternate protein names: Type IV Secretion System ; VirB8 Protein

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MEDKLLESVKNKSYFSKAVEWYCHRYLFCVAERSWMALIVSLLLVCLCLLTLNIYLLFPVKKDLNFVKYMNHTEDEFSAM
HKLSFSKKEDEYTSTARYLISKYIEIYESIKTVEPKYQENFIRNNSIHKIYQGFQEKTNNEAGNLSLSKRKIANINVITL
SIDRSTKDLVTFAGNATVVFTTEQNKEDTVEISFTLSNIKATLAGIIPFKFIVNGYKYRF

Sequences:

>Translated_220_residues
MEDKLLESVKNKSYFSKAVEWYCHRYLFCVAERSWMALIVSLLLVCLCLLTLNIYLLFPVKKDLNFVKYMNHTEDEFSAM
HKLSFSKKEDEYTSTARYLISKYIEIYESIKTVEPKYQENFIRNNSIHKIYQGFQEKTNNEAGNLSLSKRKIANINVITL
SIDRSTKDLVTFAGNATVVFTTEQNKEDTVEISFTLSNIKATLAGIIPFKFIVNGYKYRF
>Mature_220_residues
MEDKLLESVKNKSYFSKAVEWYCHRYLFCVAERSWMALIVSLLLVCLCLLTLNIYLLFPVKKDLNFVKYMNHTEDEFSAM
HKLSFSKKEDEYTSTARYLISKYIEIYESIKTVEPKYQENFIRNNSIHKIYQGFQEKTNNEAGNLSLSKRKIANINVITL
SIDRSTKDLVTFAGNATVVFTTEQNKEDTVEISFTLSNIKATLAGIIPFKFIVNGYKYRF

Specific function: Unknown

COG id: COG3736

COG function: function code U; Type IV secretory pathway, component VirB8

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25667; Mature: 25667

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDKLLESVKNKSYFSKAVEWYCHRYLFCVAERSWMALIVSLLLVCLCLLTLNIYLLFPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEC
KKDLNFVKYMNHTEDEFSAMHKLSFSKKEDEYTSTARYLISKYIEIYESIKTVEPKYQEN
HHCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
FIRNNSIHKIYQGFQEKTNNEAGNLSLSKRKIANINVITLSIDRSTKDLVTFAGNATVVF
HHCCCCHHHHHHHHHHHCCCCCCCCEECHHEECEEEEEEEEECCCCHHHEEECCCEEEEE
TTEQNKEDTVEISFTLSNIKATLAGIIPFKFIVNGYKYRF
EECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCEECC
>Mature Secondary Structure
MEDKLLESVKNKSYFSKAVEWYCHRYLFCVAERSWMALIVSLLLVCLCLLTLNIYLLFPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEC
KKDLNFVKYMNHTEDEFSAMHKLSFSKKEDEYTSTARYLISKYIEIYESIKTVEPKYQEN
HHCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
FIRNNSIHKIYQGFQEKTNNEAGNLSLSKRKIANINVITLSIDRSTKDLVTFAGNATVVF
HHCCCCHHHHHHHHHHHCCCCCCCCEECHHEECEEEEEEEEECCCCHHHEEECCCEEEEE
TTEQNKEDTVEISFTLSNIKATLAGIIPFKFIVNGYKYRF
EECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA